RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 ZNF141Q15928 474 aa13.08□□□□□ -0.32
CLCN4-201ENST00000380829 ALG10BQ5I7T1 473 aa13.08□□□□□ -0.32
CLCN4-201ENST00000380829 CLVS2Q5SYC1 327 aa13.08□□□□□ -0.32
CLCN4-201ENST00000380829 DDI2Q5TDH0 399 aa13.08□□□□□ -0.32
CLCN4-201ENST00000380829 GATSQ8NAP1 163 aa13.08□□□□□ -0.32
CLCN4-201ENST00000380829 NDC1Q9BTX1 674 aa13.08□□□□□ -0.32
CLCN4-201ENST00000380829 TEX12Q9BXU0 123 aa13.08□□□□□ -0.32
CLCN4-201ENST00000380829 ATXN7L1Q9ULK2 861 aaPredicted RBP13.08□□□□□ -0.32
CLCN4-201ENST00000380829 STUB1Q9UNE7 303 aa13.08□□□□□ -0.32
CLCN4-201ENST00000380829 YARS2Q9Y2Z4 477 aaKnown RBP13.08□□□□□ -0.32
CLCN4-201ENST00000380829 TRAV27A0A087WT01 109 aa13.08□□□□□ -0.32
CLCN4-201ENST00000380829 CHP2O43745 196 aa13.08□□□□□ -0.32
CLCN4-201ENST00000380829 NGFRP08138 427 aa13.08□□□□□ -0.32
CLCN4-201ENST00000380829 SDHBP21912 280 aa13.08□□□□□ -0.32
CLCN4-201ENST00000380829 AGFG1P52594 562 aaKnown RBP13.08□□□□□ -0.32
CLCN4-201ENST00000380829 OR2G6Q5TZ20 316 aa13.08□□□□□ -0.32
CLCN4-201ENST00000380829 THSD4Q6ZMP0 1018 aa13.08□□□□□ -0.32
CLCN4-201ENST00000380829 TMPRSS9Q7Z410 1059 aa13.08□□□□□ -0.32
CLCN4-201ENST00000380829 TMEM151BQ8IW70 566 aa13.08□□□□□ -0.32
CLCN4-201ENST00000380829 ZSCAN1Q8NBB4 408 aa13.08□□□□□ -0.32
CLCN4-201ENST00000380829 PROKR2Q8NFJ6 384 aa13.08□□□□□ -0.32
CLCN4-201ENST00000380829 SLC41A2Q96JW4 573 aa13.08□□□□□ -0.32
CLCN4-201ENST00000380829 HS6ST2Q96MM7 605 aa13.08□□□□□ -0.32
CLCN4-201ENST00000380829 ZFP64Q9NPA5 681 aa13.08□□□□□ -0.32
CLCN4-201ENST00000380829 COMMD3Q9UBI1 195 aa13.08□□□□□ -0.32
CLCN4-201ENST00000380829 PRODH2Q9UF12 536 aa13.08□□□□□ -0.32
CLCN4-201ENST00000380829 ZNF222Q9UK12 451 aa13.08□□□□□ -0.32
CLCN4-201ENST00000380829 CACNA1EQ15878 2313 aa13.08□□□□□ -0.32
CLCN4-201ENST00000380829 NDUFA2O43678 99 aa13.07□□□□□ -0.32
CLCN4-201ENST00000380829 AKAP8O43823 692 aaKnown RBP13.07□□□□□ -0.32
CLCN4-201ENST00000380829 CSTAP01040 98 aa13.07□□□□□ -0.32
CLCN4-201ENST00000380829 TBXA2RP21731 343 aa13.07□□□□□ -0.32
CLCN4-201ENST00000380829 SLC37A1P57057 533 aa13.07□□□□□ -0.32
CLCN4-201ENST00000380829 FOXL2P58012 376 aa13.07□□□□□ -0.32
CLCN4-201ENST00000380829 RAB40BQ12829 278 aa13.07□□□□□ -0.32
CLCN4-201ENST00000380829 KLHL22Q53GT1 634 aa13.07□□□□□ -0.32
CLCN4-201ENST00000380829 AADACL4Q5VUY2 407 aa13.07□□□□□ -0.32
CLCN4-201ENST00000380829 KIRREL2Q6UWL6 708 aa13.07□□□□□ -0.32
CLCN4-201ENST00000380829 MED25Q71SY5 747 aa13.07□□□□□ -0.32
CLCN4-201ENST00000380829 GPAT4Q86UL3 456 aa13.07□□□□□ -0.32
CLCN4-201ENST00000380829 CDK20Q8IZL9 346 aa13.07□□□□□ -0.32
CLCN4-201ENST00000380829 CLDN22Q8N7P3 220 aa13.07□□□□□ -0.32
CLCN4-201ENST00000380829 OR52L1Q8NGH7 329 aa13.07□□□□□ -0.32
CLCN4-201ENST00000380829 OR52H1Q8NGJ2 320 aa13.07□□□□□ -0.32
CLCN4-201ENST00000380829 OR51A7Q8NH64 312 aa13.07□□□□□ -0.32
CLCN4-201ENST00000380829 BRIX1Q8TDN6 353 aaKnown RBP13.07□□□□□ -0.32
CLCN4-201ENST00000380829 ST8SIA4Q92187 359 aa13.07□□□□□ -0.32
CLCN4-201ENST00000380829 KLHL15Q96M94 604 aa13.07□□□□□ -0.32
CLCN4-201ENST00000380829 LINC00052Q96N35 136 aa13.07□□□□□ -0.32
CLCN4-201ENST00000380829 DPYSL5Q9BPU6 564 aa13.07□□□□□ -0.32
CLCN4-201ENST00000380829 PELOQ9BRX2 385 aaKnown RBP13.07□□□□□ -0.32
CLCN4-201ENST00000380829 HINT3Q9NQE9 182 aaKnown RBP13.07□□□□□ -0.32
CLCN4-201ENST00000380829 FGF21Q9NSA1 209 aa13.07□□□□□ -0.32
CLCN4-201ENST00000380829 INMT-MINDY4F8WBC2 141 aa13.07□□□□□ -0.32
CLCN4-201ENST00000380829 ORC5O43913 435 aa13.07□□□□□ -0.32
CLCN4-201ENST00000380829 TPOP07202 933 aa13.07□□□□□ -0.32
CLCN4-201ENST00000380829 GUSBP08236 651 aa13.07□□□□□ -0.32
CLCN4-201ENST00000380829 PRKAR1AP10644 381 aa13.07□□□□□ -0.32
CLCN4-201ENST00000380829 FBLP22087 321 aaKnown RBP13.07□□□□□ -0.32
CLCN4-201ENST00000380829 SDC2P34741 201 aa13.07□□□□□ -0.32
CLCN4-201ENST00000380829 C1DQ13901 141 aaKnown RBP13.07□□□□□ -0.32
CLCN4-201ENST00000380829 GPR139Q6DWJ6 353 aa13.07□□□□□ -0.32
CLCN4-201ENST00000380829 B3GLCTQ6Y288 498 aa13.07□□□□□ -0.32
CLCN4-201ENST00000380829 CHMP1BQ7LBR1 199 aa13.07□□□□□ -0.32
CLCN4-201ENST00000380829 BMP8AQ7Z5Y6 402 aa13.07□□□□□ -0.32
CLCN4-201ENST00000380829 CPOQ8IVL8 374 aa13.07□□□□□ -0.32
CLCN4-201ENST00000380829 LINC00518Q8N0U6 118 aa13.07□□□□□ -0.32
CLCN4-201ENST00000380829 CARFQ8N187 725 aa13.07□□□□□ -0.32
CLCN4-201ENST00000380829 DUSP18Q8NEJ0 188 aa13.07□□□□□ -0.32
CLCN4-201ENST00000380829 OR4F15Q8NGB8 312 aa13.07□□□□□ -0.32
CLCN4-201ENST00000380829 MVB12AQ96EY5 273 aa13.07□□□□□ -0.32
CLCN4-201ENST00000380829 OR1F2PQ96R84 312 aa13.07□□□□□ -0.32
CLCN4-201ENST00000380829 MARVELD1Q9BSK0 173 aa13.07□□□□□ -0.32
CLCN4-201ENST00000380829 ZNF304Q9HCX3 659 aa13.07□□□□□ -0.32
CLCN4-201ENST00000380829 TXNL4BQ9NX01 149 aaKnown RBP13.07□□□□□ -0.32
CLCN4-201ENST00000380829 ATPIF1Q9UII2 106 aa13.07□□□□□ -0.32
CLCN4-201ENST00000380829 MMACHCQ9Y4U1 282 aa13.07□□□□□ -0.32
CLCN4-201ENST00000380829 IGKV3D-11A0A0A0MRZ8 115 aa13.06□□□□□ -0.32
CLCN4-201ENST00000380829 CPED1A4D0V7 1026 aa13.06□□□□□ -0.32
CLCN4-201ENST00000380829 SERINC4A6NH21 518 aa13.06□□□□□ -0.32
CLCN4-201ENST00000380829 SOCS6O14544 535 aa13.06□□□□□ -0.32
CLCN4-201ENST00000380829 MPC2O95563 127 aa13.06□□□□□ -0.32
CLCN4-201ENST00000380829 CFDP00746 253 aaPredicted RBP13.06□□□□□ -0.32
CLCN4-201ENST00000380829 BMP7P18075 431 aa13.06□□□□□ -0.32
CLCN4-201ENST00000380829 CD79BP40259 229 aa13.06□□□□□ -0.32
CLCN4-201ENST00000380829 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.06□□□□□ -0.32
CLCN4-201ENST00000380829 IL18Q14116 193 aa13.06□□□□□ -0.32
CLCN4-201ENST00000380829 DSG2Q14126 1118 aa13.06□□□□□ -0.32
CLCN4-201ENST00000380829 ANGPT1Q15389 498 aa13.06□□□□□ -0.32
CLCN4-201ENST00000380829 C3orf38Q5JPI3 329 aa13.06□□□□□ -0.32
CLCN4-201ENST00000380829 ARHGAP40Q5TG30 622 aa13.06□□□□□ -0.32
CLCN4-201ENST00000380829 RNLSQ5VYX0 342 aa13.06□□□□□ -0.32
CLCN4-201ENST00000380829 FCRLBQ6BAA4 426 aa13.06□□□□□ -0.32
CLCN4-201ENST00000380829 MZT2BQ6NZ67 158 aa13.06□□□□□ -0.32
CLCN4-201ENST00000380829 GUSBP11Q6P575 273 aa13.06□□□□□ -0.32
CLCN4-201ENST00000380829 CNIH2Q6PI25 160 aa13.06□□□□□ -0.32
CLCN4-201ENST00000380829 WDR74Q6RFH5 385 aaPredicted RBP13.06□□□□□ -0.32
CLCN4-201ENST00000380829 TMPRSS11FQ6ZWK6 438 aa13.06□□□□□ -0.32
CLCN4-201ENST00000380829 LAPTM4BQ86VI4 370 aa13.06□□□□□ -0.32
CLCN4-201ENST00000380829 GPALPP1Q8IXQ4 340 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms