RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 KLHL13Q9P2N7 655 aa8.23□□□□□ -1.09
HMGN1-202ENST00000380747 TESQ9UGI8 421 aaKnown RBP8.23□□□□□ -1.09
HMGN1-202ENST00000380747 PRDM4Q9UKN5 801 aa8.23□□□□□ -1.09
HMGN1-202ENST00000380747 AP3M1Q9Y2T2 418 aa8.23□□□□□ -1.09
HMGN1-202ENST00000380747 FLNAP21333 2647 aaKnown RBP8.22□□□□□ -1.09
HMGN1-202ENST00000380747 A0A1B0GWA3 101 aa8.22□□□□□ -1.09
HMGN1-202ENST00000380747 ELOVL7A1L3X0 281 aa8.22□□□□□ -1.09
HMGN1-202ENST00000380747 A8MVM7 634 aa8.22□□□□□ -1.09
HMGN1-202ENST00000380747 GSTA4O15217 222 aa8.22□□□□□ -1.09
HMGN1-202ENST00000380747 DNPH1O43598 174 aa8.22□□□□□ -1.09
HMGN1-202ENST00000380747 CYTIPO60759 359 aa8.22□□□□□ -1.09
HMGN1-202ENST00000380747 AHSA1O95433 338 aa8.22□□□□□ -1.09
HMGN1-202ENST00000380747 LGI1O95970 557 aa8.22□□□□□ -1.09
HMGN1-202ENST00000380747 CGAP01215 116 aa8.22□□□□□ -1.09
HMGN1-202ENST00000380747 CD8BP10966 210 aa8.22□□□□□ -1.09
HMGN1-202ENST00000380747 IMPDH2P12268 514 aa8.22□□□□□ -1.09
HMGN1-202ENST00000380747 POU2F1P14859 743 aa8.22□□□□□ -1.09
HMGN1-202ENST00000380747 HOXB4P17483 251 aaPredicted RBP8.22□□□□□ -1.09
HMGN1-202ENST00000380747 IGFBP2P18065 325 aa8.22□□□□□ -1.09
HMGN1-202ENST00000380747 CD247P20963 164 aa8.22□□□□□ -1.09
HMGN1-202ENST00000380747 FPR1P21462 350 aa8.22□□□□□ -1.09
HMGN1-202ENST00000380747 HTR2AP28223 471 aa8.22□□□□□ -1.09
HMGN1-202ENST00000380747 MAP2K6P52564 334 aa8.22□□□□□ -1.09
HMGN1-202ENST00000380747 SLC7A2P52569 658 aa8.22□□□□□ -1.09
HMGN1-202ENST00000380747 PSME3P61289 254 aa8.22□□□□□ -1.09
HMGN1-202ENST00000380747 SLC35A1P78382 337 aa8.22□□□□□ -1.09
HMGN1-202ENST00000380747 TLE4Q04727 773 aa8.22□□□□□ -1.09
HMGN1-202ENST00000380747 RASGEF1BQ0VAM2 473 aa8.22□□□□□ -1.09
HMGN1-202ENST00000380747 CEACAM7Q14002 265 aa8.22□□□□□ -1.09
HMGN1-202ENST00000380747 VEZF1Q14119 521 aa8.22□□□□□ -1.09
HMGN1-202ENST00000380747 GUSBP1Q15486 140 aa8.22□□□□□ -1.09
HMGN1-202ENST00000380747 OR1Q1Q15612 314 aa8.22□□□□□ -1.09
HMGN1-202ENST00000380747 OR7A5Q15622 319 aa8.22□□□□□ -1.09
HMGN1-202ENST00000380747 DUSP7Q16829 419 aa8.22□□□□□ -1.09
HMGN1-202ENST00000380747 LRRC23Q53EV4 343 aaPredicted RBP8.22□□□□□ -1.09
HMGN1-202ENST00000380747 ALG10BQ5I7T1 473 aa8.22□□□□□ -1.09
HMGN1-202ENST00000380747 GKAP1Q5VSY0 366 aaPredicted RBP8.22□□□□□ -1.09
HMGN1-202ENST00000380747 ZNF474Q6S9Z5 364 aaPredicted RBP8.22□□□□□ -1.09
HMGN1-202ENST00000380747 HACD2Q6Y1H2 254 aa8.22□□□□□ -1.09
HMGN1-202ENST00000380747 CCDC80Q76M96 950 aa8.22□□□□□ -1.09
HMGN1-202ENST00000380747 NUFIP2Q7Z417 695 aaKnown RBP8.22□□□□□ -1.09
HMGN1-202ENST00000380747 ATG4DQ86TL0 474 aaPredicted RBP8.22□□□□□ -1.09
HMGN1-202ENST00000380747 SLC15A3Q8IY34 581 aa8.22□□□□□ -1.09
HMGN1-202ENST00000380747 MICU2Q8IYU8 434 aa8.22□□□□□ -1.09
HMGN1-202ENST00000380747 PROX1Q92786 737 aa8.22□□□□□ -1.09
HMGN1-202ENST00000380747 ZNF775Q96BV0 537 aaPredicted RBP8.22□□□□□ -1.09
HMGN1-202ENST00000380747 LRRC37BQ96QE4 947 aa8.22□□□□□ -1.09
HMGN1-202ENST00000380747 ZNF300Q96RE9 604 aaPredicted RBP8.22□□□□□ -1.09
HMGN1-202ENST00000380747 MCHR1Q99705 422 aa8.22□□□□□ -1.09
HMGN1-202ENST00000380747 MDFIQ99750 246 aa8.22□□□□□ -1.09
HMGN1-202ENST00000380747 ARHGDIGQ99819 225 aa8.22□□□□□ -1.09
HMGN1-202ENST00000380747 WFDC6Q9BQY6 131 aa8.22□□□□□ -1.09
HMGN1-202ENST00000380747 NAA11Q9BSU3 229 aaPredicted RBP8.22□□□□□ -1.09
HMGN1-202ENST00000380747 TAPBPLQ9BX59 468 aa8.22□□□□□ -1.09
HMGN1-202ENST00000380747 POTEKPQ9BYX7 375 aa8.22□□□□□ -1.09
HMGN1-202ENST00000380747 EVA1AQ9H8M9 152 aa8.22□□□□□ -1.09
HMGN1-202ENST00000380747 FAM53CQ9NYF3 392 aa8.22□□□□□ -1.09
HMGN1-202ENST00000380747 KLHL9Q9P2J3 617 aa8.22□□□□□ -1.09
HMGN1-202ENST00000380747 TAGLN3Q9UI15 199 aa8.22□□□□□ -1.09
HMGN1-202ENST00000380747 TRAPPC4Q9Y296 219 aa8.22□□□□□ -1.09
HMGN1-202ENST00000380747 ABCA4P78363 2273 aa8.21□□□□□ -1.1
HMGN1-202ENST00000380747 TUBAL3A6NHL2 446 aa8.21□□□□□ -1.1
HMGN1-202ENST00000380747 CPSF4LA6NMK7 179 aaKnown RBP8.21□□□□□ -1.1
HMGN1-202ENST00000380747 ZNF814B7Z6K7 855 aa8.21□□□□□ -1.1
HMGN1-202ENST00000380747 NME4O00746 187 aa8.21□□□□□ -1.1
HMGN1-202ENST00000380747 FAM107AO95990 144 aa8.21□□□□□ -1.1
HMGN1-202ENST00000380747 IFNA14P01570 189 aa8.21□□□□□ -1.1
HMGN1-202ENST00000380747 C8BP07358 591 aa8.21□□□□□ -1.1
HMGN1-202ENST00000380747 YES1P07947 543 aa8.21□□□□□ -1.1
HMGN1-202ENST00000380747 PNMTP11086 282 aa8.21□□□□□ -1.1
HMGN1-202ENST00000380747 TNFRSF1BP20333 461 aa8.21□□□□□ -1.1
HMGN1-202ENST00000380747 KDELR2P33947 212 aa8.21□□□□□ -1.1
HMGN1-202ENST00000380747 CD79BP40259 229 aa8.21□□□□□ -1.1
HMGN1-202ENST00000380747 PEX19P40855 299 aa8.21□□□□□ -1.1
HMGN1-202ENST00000380747 CRYBA2P53672 197 aa8.21□□□□□ -1.1
HMGN1-202ENST00000380747 MXRA7P84157 204 aa8.21□□□□□ -1.1
HMGN1-202ENST00000380747 SORDQ00796 357 aa8.21□□□□□ -1.1
HMGN1-202ENST00000380747 FAM27E3Q08E93 113 aa8.21□□□□□ -1.1
HMGN1-202ENST00000380747 CYBRD1Q53TN4 286 aa8.21□□□□□ -1.1
HMGN1-202ENST00000380747 C1orf140Q5VVS0 124 aa8.21□□□□□ -1.1
HMGN1-202ENST00000380747 ULK3Q6PHR2 472 aa8.21□□□□□ -1.1
HMGN1-202ENST00000380747 STK32CQ86UX6 486 aa8.21□□□□□ -1.1
HMGN1-202ENST00000380747 RBM45Q8IUH3 476 aaKnown RBP8.21□□□□□ -1.1
HMGN1-202ENST00000380747 P3H2Q8IVL5 708 aa8.21□□□□□ -1.1
HMGN1-202ENST00000380747 CCDC103Q8IW40 242 aa8.21□□□□□ -1.1
HMGN1-202ENST00000380747 LSMEM1Q8N8F7 131 aa8.21□□□□□ -1.1
HMGN1-202ENST00000380747 OR4D11Q8NGI4 311 aa8.21□□□□□ -1.1
HMGN1-202ENST00000380747 OR6T1Q8NGN1 323 aa8.21□□□□□ -1.1
HMGN1-202ENST00000380747 LINC01560Q8TB33 94 aa8.21□□□□□ -1.1
HMGN1-202ENST00000380747 PIGXQ8TBF5 258 aa8.21□□□□□ -1.1
HMGN1-202ENST00000380747 STK35Q8TDR2 534 aa8.21□□□□□ -1.1
HMGN1-202ENST00000380747 DNAJA4Q8WW22 397 aaPredicted RBP8.21□□□□□ -1.1
HMGN1-202ENST00000380747 RASSF5Q8WWW0 418 aa8.21□□□□□ -1.1
HMGN1-202ENST00000380747 SLC25A36Q96CQ1 311 aa8.21□□□□□ -1.1
HMGN1-202ENST00000380747 SLC47A1Q96FL8 570 aa8.21□□□□□ -1.1
HMGN1-202ENST00000380747 PSD2Q9BQI7 771 aa8.21□□□□□ -1.1
HMGN1-202ENST00000380747 TACO1Q9BSH4 297 aaKnown RBP8.21□□□□□ -1.1
HMGN1-202ENST00000380747 KLHL4Q9C0H6 718 aa8.21□□□□□ -1.1
HMGN1-202ENST00000380747 GP6Q9HCN6 339 aa8.21□□□□□ -1.1
HMGN1-202ENST00000380747 PLSCR4Q9NRQ2 329 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms