RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 VASH1Q7L8A9 365 aaPredicted RBP7.28□□□□□ -1.24
PDLIM5-204ENST00000380176 PRSS58Q8IYP2 241 aa7.28□□□□□ -1.24
PDLIM5-204ENST00000380176 Q8N9G6 341 aaPredicted RBP7.28□□□□□ -1.24
PDLIM5-204ENST00000380176 TEX19Q8NA77 164 aa7.28□□□□□ -1.24
PDLIM5-204ENST00000380176 GALNT6Q8NCL4 622 aa7.28□□□□□ -1.24
PDLIM5-204ENST00000380176 OR1L3Q8NH93 324 aa7.28□□□□□ -1.24
PDLIM5-204ENST00000380176 PHOSPHO1Q8TCT1 267 aa7.28□□□□□ -1.24
PDLIM5-204ENST00000380176 AP3S1Q92572 193 aa7.28□□□□□ -1.24
PDLIM5-204ENST00000380176 RASD2Q96D21 266 aa7.28□□□□□ -1.24
PDLIM5-204ENST00000380176 ZDHHC12Q96GR4 267 aa7.28□□□□□ -1.24
PDLIM5-204ENST00000380176 AHCYL2Q96HN2 611 aaKnown RBP7.28□□□□□ -1.24
PDLIM5-204ENST00000380176 ZNF578Q96N58 590 aaPredicted RBP7.28□□□□□ -1.24
PDLIM5-204ENST00000380176 COQ7Q99807 217 aa7.28□□□□□ -1.24
PDLIM5-204ENST00000380176 NDC1Q9BTX1 674 aa7.28□□□□□ -1.24
PDLIM5-204ENST00000380176 MMP28Q9H239 520 aa7.28□□□□□ -1.24
PDLIM5-204ENST00000380176 PPP1R3EQ9H7J1 279 aa7.28□□□□□ -1.24
PDLIM5-204ENST00000380176 EVA1AQ9H8M9 152 aa7.28□□□□□ -1.24
PDLIM5-204ENST00000380176 BAIAP2Q9UQB8 552 aa7.28□□□□□ -1.24
PDLIM5-204ENST00000380176 PCDHGB2Q9Y5G2 931 aa7.28□□□□□ -1.24
PDLIM5-204ENST00000380176 NUP210LQ5VU65 1888 aa7.28□□□□□ -1.24
PDLIM5-204ENST00000380176 IGHV1OR21-1A0A087WYE8 117 aa7.28□□□□□ -1.24
PDLIM5-204ENST00000380176 OR6C68A6NDL8 312 aa7.28□□□□□ -1.24
PDLIM5-204ENST00000380176 ALG1L2C9J202 215 aa7.28□□□□□ -1.24
PDLIM5-204ENST00000380176 PLA2G10O15496 165 aa7.28□□□□□ -1.24
PDLIM5-204ENST00000380176 PLPP2O43688 288 aa7.28□□□□□ -1.24
PDLIM5-204ENST00000380176 WISP1O95388 367 aa7.28□□□□□ -1.24
PDLIM5-204ENST00000380176 MT-ND5P03915 603 aa7.28□□□□□ -1.24
PDLIM5-204ENST00000380176 GAAP10253 952 aa7.28□□□□□ -1.24
PDLIM5-204ENST00000380176 FOLR1P15328 257 aa7.28□□□□□ -1.24
PDLIM5-204ENST00000380176 PYCR1P32322 319 aa7.28□□□□□ -1.24
PDLIM5-204ENST00000380176 RPL4P36578 427 aaKnown RBP7.28□□□□□ -1.24
PDLIM5-204ENST00000380176 CCR4P51679 360 aa7.28□□□□□ -1.24
PDLIM5-204ENST00000380176 GPR143P51810 404 aa7.28□□□□□ -1.24
PDLIM5-204ENST00000380176 OR10A3P58181 314 aa7.28□□□□□ -1.24
PDLIM5-204ENST00000380176 ERVK-25P63136 954 aa7.28□□□□□ -1.24
PDLIM5-204ENST00000380176 SKP2Q13309 424 aa7.28□□□□□ -1.24
PDLIM5-204ENST00000380176 GPR50Q13585 617 aa7.28□□□□□ -1.24
PDLIM5-204ENST00000380176 SERTAD2Q14140 314 aa7.28□□□□□ -1.24
PDLIM5-204ENST00000380176 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.28□□□□□ -1.24
PDLIM5-204ENST00000380176 TMEM53Q6P2H8 277 aa7.28□□□□□ -1.24
PDLIM5-204ENST00000380176 IL20RBQ6UXL0 311 aa7.28□□□□□ -1.24
PDLIM5-204ENST00000380176 AKAP14Q86UN6 197 aa7.28□□□□□ -1.24
PDLIM5-204ENST00000380176 CMIPQ8IY22 773 aa7.28□□□□□ -1.24
PDLIM5-204ENST00000380176 SLC25A45Q8N413 288 aa7.28□□□□□ -1.24
PDLIM5-204ENST00000380176 DTX3Q8N9I9 347 aa7.28□□□□□ -1.24
PDLIM5-204ENST00000380176 FAM71CQ8NEG0 241 aa7.28□□□□□ -1.24
PDLIM5-204ENST00000380176 MOSPD2Q8NHP6 518 aa7.28□□□□□ -1.24
PDLIM5-204ENST00000380176 SETD6Q8TBK2 473 aa7.28□□□□□ -1.24
PDLIM5-204ENST00000380176 DNAJA3Q96EY1 480 aa7.28□□□□□ -1.24
PDLIM5-204ENST00000380176 PGLYRP3Q96LB9 341 aa7.28□□□□□ -1.24
PDLIM5-204ENST00000380176 CLUHP3Q96NS8 147 aa7.28□□□□□ -1.24
PDLIM5-204ENST00000380176 MOGAT1Q96PD6 335 aa7.28□□□□□ -1.24
PDLIM5-204ENST00000380176 SOSTQ9BQB4 213 aa7.28□□□□□ -1.24
PDLIM5-204ENST00000380176 C11orf54Q9H0W9 315 aaPredicted RBP7.28□□□□□ -1.24
PDLIM5-204ENST00000380176 B3GAT2Q9NPZ5 323 aa7.28□□□□□ -1.24
PDLIM5-204ENST00000380176 HAO2Q9NYQ3 351 aa7.28□□□□□ -1.24
PDLIM5-204ENST00000380176 EPHA6Q9UF33 1036 aa7.28□□□□□ -1.24
PDLIM5-204ENST00000380176 ZNF346Q9UL40 294 aaKnown RBP7.28□□□□□ -1.24
PDLIM5-204ENST00000380176 TFECO14948 347 aaPredicted RBP7.27□□□□□ -1.25
PDLIM5-204ENST00000380176 SERPINI2O75830 405 aa7.27□□□□□ -1.25
PDLIM5-204ENST00000380176 UBL4AP11441 157 aa7.27□□□□□ -1.25
PDLIM5-204ENST00000380176 CSF2RBP32927 897 aa7.27□□□□□ -1.25
PDLIM5-204ENST00000380176 EVX1P49640 407 aa7.27□□□□□ -1.25
PDLIM5-204ENST00000380176 NKX2-5P52952 324 aaPredicted RBP7.27□□□□□ -1.25
PDLIM5-204ENST00000380176 PSMD4P55036 377 aaKnown RBP7.27□□□□□ -1.25
PDLIM5-204ENST00000380176 OR2B6P58173 313 aa7.27□□□□□ -1.25
PDLIM5-204ENST00000380176 PPP3R1P63098 170 aa7.27□□□□□ -1.25
PDLIM5-204ENST00000380176 GDPD1Q8N9F7 314 aa7.27□□□□□ -1.25
PDLIM5-204ENST00000380176 NPEPL1Q8NDH3 523 aa7.27□□□□□ -1.25
PDLIM5-204ENST00000380176 ABHD4Q8TB40 342 aa7.27□□□□□ -1.25
PDLIM5-204ENST00000380176 SLC2A12Q8TD20 617 aa7.27□□□□□ -1.25
PDLIM5-204ENST00000380176 ZNF721Q8TF20 911 aa7.27□□□□□ -1.25
PDLIM5-204ENST00000380176 NINJ1Q92982 152 aa7.27□□□□□ -1.25
PDLIM5-204ENST00000380176 ADOQ96SZ5 270 aa7.27□□□□□ -1.25
PDLIM5-204ENST00000380176 DDOQ99489 341 aa7.27□□□□□ -1.25
PDLIM5-204ENST00000380176 RAB33BQ9H082 229 aa7.27□□□□□ -1.25
PDLIM5-204ENST00000380176 UBQLN4Q9NRR5 601 aa7.27□□□□□ -1.25
PDLIM5-204ENST00000380176 PRODH2Q9UF12 536 aa7.27□□□□□ -1.25
PDLIM5-204ENST00000380176 POU2F3Q9UKI9 436 aa7.27□□□□□ -1.25
PDLIM5-204ENST00000380176 ADAMTS20P59510 1910 aa7.27□□□□□ -1.25
PDLIM5-204ENST00000380176 ASCC3Q8N3C0 2202 aaKnown RBP7.27□□□□□ -1.25
PDLIM5-204ENST00000380176 IGKV3D-11A0A0A0MRZ8 115 aa7.27□□□□□ -1.25
PDLIM5-204ENST00000380176 A0A1W2PPK0 400 aa7.27□□□□□ -1.25
PDLIM5-204ENST00000380176 HTR3EA5X5Y0 456 aa7.27□□□□□ -1.25
PDLIM5-204ENST00000380176 A6NJY4 79 aa7.27□□□□□ -1.25
PDLIM5-204ENST00000380176 FAM171A2A8MVW0 826 aa7.27□□□□□ -1.25
PDLIM5-204ENST00000380176 BLOC1S5-TXNDC5H3BN57 136 aa7.27□□□□□ -1.25
PDLIM5-204ENST00000380176 OR7A10O76100 309 aa7.27□□□□□ -1.25
PDLIM5-204ENST00000380176 UTS2O95399 124 aa7.27□□□□□ -1.25
PDLIM5-204ENST00000380176 DDAH2O95865 285 aa7.27□□□□□ -1.25
PDLIM5-204ENST00000380176 IFNGP01579 166 aa7.27□□□□□ -1.25
PDLIM5-204ENST00000380176 IGKV3-11P04433 115 aa7.27□□□□□ -1.25
PDLIM5-204ENST00000380176 GALNSP34059 522 aa7.27□□□□□ -1.25
PDLIM5-204ENST00000380176 AQP2P41181 271 aa7.27□□□□□ -1.25
PDLIM5-204ENST00000380176 PPICP45877 212 aa7.27□□□□□ -1.25
PDLIM5-204ENST00000380176 RPS4XP62701 263 aaKnown RBP7.27□□□□□ -1.25
PDLIM5-204ENST00000380176 EGR4Q05215 589 aa7.27□□□□□ -1.25
PDLIM5-204ENST00000380176 ZP2Q05996 745 aa7.27□□□□□ -1.25
PDLIM5-204ENST00000380176 SCN1BQ07699 218 aa7.27□□□□□ -1.25
PDLIM5-204ENST00000380176 DMWDQ09019 674 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms