RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 IGKV1D-42A0A075B6H8 117 aa10.65□□□□□ -0.7
PCNA-201ENST00000379143 LIPT2A6NK58 231 aa10.65□□□□□ -0.7
PCNA-201ENST00000379143 SMAD9O15198 467 aaKnown RBP10.65□□□□□ -0.7
PCNA-201ENST00000379143 CYTIPO60759 359 aa10.65□□□□□ -0.7
PCNA-201ENST00000379143 AQP8O94778 261 aa10.65□□□□□ -0.7
PCNA-201ENST00000379143 IGF2P01344 180 aa10.65□□□□□ -0.7
PCNA-201ENST00000379143 THY1P04216 161 aa10.65□□□□□ -0.7
PCNA-201ENST00000379143 SEMG1P04279 462 aa10.65□□□□□ -0.7
PCNA-201ENST00000379143 FABP3P05413 133 aa10.65□□□□□ -0.7
PCNA-201ENST00000379143 IMPDH2P12268 514 aa10.65□□□□□ -0.7
PCNA-201ENST00000379143 FPR1P21462 350 aa10.65□□□□□ -0.7
PCNA-201ENST00000379143 RPS5P46782 204 aaKnown RBP10.65□□□□□ -0.7
PCNA-201ENST00000379143 H3F3AP84243 136 aa10.65□□□□□ -0.7
PCNA-201ENST00000379143 VLDLRP98155 873 aa10.65□□□□□ -0.7
PCNA-201ENST00000379143 FLOT2Q14254 428 aa10.65□□□□□ -0.7
PCNA-201ENST00000379143 TRAM2Q15035 370 aa10.65□□□□□ -0.7
PCNA-201ENST00000379143 OR7A5Q15622 319 aa10.65□□□□□ -0.7
PCNA-201ENST00000379143 FAM98BQ52LJ0 330 aaKnown RBP10.65□□□□□ -0.7
PCNA-201ENST00000379143 ASRGL1Q7L266 308 aa10.65□□□□□ -0.7
PCNA-201ENST00000379143 TSPYL5Q86VY4 417 aaPredicted RBP10.65□□□□□ -0.7
PCNA-201ENST00000379143 LILRB4Q8NHJ6 448 aa10.65□□□□□ -0.7
PCNA-201ENST00000379143 PIGXQ8TBF5 258 aa10.65□□□□□ -0.7
PCNA-201ENST00000379143 ITLN2Q8WWU7 325 aaPredicted RBP10.65□□□□□ -0.7
PCNA-201ENST00000379143 ROBO4Q8WZ75 1007 aa10.65□□□□□ -0.7
PCNA-201ENST00000379143 SDCCAG3Q96C92 435 aa10.65□□□□□ -0.7
PCNA-201ENST00000379143 INTS12Q96CB8 462 aaKnown RBP10.65□□□□□ -0.7
PCNA-201ENST00000379143 KTI12Q96EK9 354 aaPredicted RBP10.65□□□□□ -0.7
PCNA-201ENST00000379143 C7orf34Q96L11 122 aa10.65□□□□□ -0.7
PCNA-201ENST00000379143 ZNF347Q96SE7 839 aa10.65□□□□□ -0.7
PCNA-201ENST00000379143 NDUFAF4Q9P032 175 aa10.65□□□□□ -0.7
PCNA-201ENST00000379143 SLC7A8Q9UHI5 535 aa10.65□□□□□ -0.7
PCNA-201ENST00000379143 EMC9Q9Y3B6 208 aa10.65□□□□□ -0.7
PCNA-201ENST00000379143 CORINQ9Y5Q5 1042 aa10.65□□□□□ -0.7
PCNA-201ENST00000379143 V9GYQ6 96 aa10.65□□□□□ -0.7
PCNA-201ENST00000379143 ICE1Q9Y2F5 2266 aa10.65□□□□□ -0.7
PCNA-201ENST00000379143 TCRBV5S2A0A599 114 aa10.64□□□□□ -0.71
PCNA-201ENST00000379143 SS18L1O75177 396 aaPredicted RBP10.64□□□□□ -0.71
PCNA-201ENST00000379143 VAMP5O95183 116 aa10.64□□□□□ -0.71
PCNA-201ENST00000379143 LYPD3O95274 346 aa10.64□□□□□ -0.71
PCNA-201ENST00000379143 CLDN14O95500 239 aa10.64□□□□□ -0.71
PCNA-201ENST00000379143 MT-ATP6P00846 226 aa10.64□□□□□ -0.71
PCNA-201ENST00000379143 UMPSP11172 480 aa10.64□□□□□ -0.71
PCNA-201ENST00000379143 YAP1P46937 504 aaKnown RBP10.64□□□□□ -0.71
PCNA-201ENST00000379143 CTBP2P56545 445 aa10.64□□□□□ -0.71
PCNA-201ENST00000379143 SMIM11AP58511 58 aa10.64□□□□□ -0.71
PCNA-201ENST00000379143 CHRNB3Q05901 458 aa10.64□□□□□ -0.71
PCNA-201ENST00000379143 RASGEF1BQ0VAM2 473 aa10.64□□□□□ -0.71
PCNA-201ENST00000379143 PDK3Q15120 406 aa10.64□□□□□ -0.71
PCNA-201ENST00000379143 SLC25A35Q3KQZ1 300 aa10.64□□□□□ -0.71
PCNA-201ENST00000379143 PLXDC2Q6UX71 529 aa10.64□□□□□ -0.71
PCNA-201ENST00000379143 WDR88Q6ZMY6 472 aa10.64□□□□□ -0.71
PCNA-201ENST00000379143 FAM214BQ7L5A3 538 aa10.64□□□□□ -0.71
PCNA-201ENST00000379143 PIWIL3Q7Z3Z3 882 aaKnown RBP10.64□□□□□ -0.71
PCNA-201ENST00000379143 YTHDF3Q7Z739 585 aaKnown RBP10.64□□□□□ -0.71
PCNA-201ENST00000379143 CCDC71Q8IV32 467 aaPredicted RBP10.64□□□□□ -0.71
PCNA-201ENST00000379143 ZDHHC21Q8IVQ6 265 aa10.64□□□□□ -0.71
PCNA-201ENST00000379143 GCNT2Q8N0V5 402 aa10.64□□□□□ -0.71
PCNA-201ENST00000379143 NAXEQ8NCW5 288 aa10.64□□□□□ -0.71
PCNA-201ENST00000379143 TMEM239Q8WW34 195 aa10.64□□□□□ -0.71
PCNA-201ENST00000379143 SEPHS2Q99611 448 aa10.64□□□□□ -0.71
PCNA-201ENST00000379143 PIP5K1AQ99755 562 aa10.64□□□□□ -0.71
PCNA-201ENST00000379143 PRSS27Q9BQR3 290 aa10.64□□□□□ -0.71
PCNA-201ENST00000379143 PTDSS2Q9BVG9 487 aa10.64□□□□□ -0.71
PCNA-201ENST00000379143 PIGMQ9H3S5 423 aa10.64□□□□□ -0.71
PCNA-201ENST00000379143 NMNAT1Q9HAN9 279 aaPredicted RBP10.64□□□□□ -0.71
PCNA-201ENST00000379143 EMC3Q9P0I2 261 aa10.64□□□□□ -0.71
PCNA-201ENST00000379143 MED31Q9Y3C7 131 aa10.64□□□□□ -0.71
PCNA-201ENST00000379143 HIVEP3Q5T1R4 2406 aa10.64□□□□□ -0.71
PCNA-201ENST00000379143 LRBAP50851 2863 aa10.64□□□□□ -0.71
PCNA-201ENST00000379143 NCOA6Q14686 2063 aaPredicted RBP10.64□□□□□ -0.71
PCNA-201ENST00000379143 KIAA1549Q9HCM3 1950 aa10.64□□□□□ -0.71
PCNA-201ENST00000379143 IGHV3-15A0A0B4J1V0 119 aa10.63□□□□□ -0.71
PCNA-201ENST00000379143 A0A1W2PNV4 684 aa10.63□□□□□ -0.71
PCNA-201ENST00000379143 A0A1W2PRQ8 180 aa10.63□□□□□ -0.71
PCNA-201ENST00000379143 AQP7P3A6NL99 342 aa10.63□□□□□ -0.71
PCNA-201ENST00000379143 FTCDNL1E5RQL4 147 aa10.63□□□□□ -0.71
PCNA-201ENST00000379143 J3KTA2 159 aa10.63□□□□□ -0.71
PCNA-201ENST00000379143 hCG_2039718K7EN88 272 aa10.63□□□□□ -0.71
PCNA-201ENST00000379143 GPR171O14626 319 aa10.63□□□□□ -0.71
PCNA-201ENST00000379143 FFAR1O14842 300 aa10.63□□□□□ -0.71
PCNA-201ENST00000379143 FZD7O75084 574 aa10.63□□□□□ -0.71
PCNA-201ENST00000379143 PRSS23O95084 383 aa10.63□□□□□ -0.71
PCNA-201ENST00000379143 MT-ND1P03886 318 aa10.63□□□□□ -0.71
PCNA-201ENST00000379143 H1F0P07305 194 aaKnown RBP10.63□□□□□ -0.71
PCNA-201ENST00000379143 YES1P07947 543 aa10.63□□□□□ -0.71
PCNA-201ENST00000379143 BMP5P22003 454 aa10.63□□□□□ -0.71
PCNA-201ENST00000379143 DGCR6Q14129 220 aa10.63□□□□□ -0.71
PCNA-201ENST00000379143 GUSBP1Q15486 140 aa10.63□□□□□ -0.71
PCNA-201ENST00000379143 TMEM201Q5SNT2 666 aa10.63□□□□□ -0.71
PCNA-201ENST00000379143 OTUD3Q5T2D3 398 aaPredicted RBP10.63□□□□□ -0.71
PCNA-201ENST00000379143 TMEM225Q6GV28 225 aa10.63□□□□□ -0.71
PCNA-201ENST00000379143 ABLIM2Q6H8Q1 611 aa10.63□□□□□ -0.71
PCNA-201ENST00000379143 RRM2BQ7LG56 351 aa10.63□□□□□ -0.71
PCNA-201ENST00000379143 TSEN54Q7Z6J9 526 aaKnown RBP10.63□□□□□ -0.71
PCNA-201ENST00000379143 NKAIN4Q8IVV8 208 aa10.63□□□□□ -0.71
PCNA-201ENST00000379143 RNF113BQ8IZP6 322 aaKnown RBP10.63□□□□□ -0.71
PCNA-201ENST00000379143 C10orf53Q8N6V4 93 aa10.63□□□□□ -0.71
PCNA-201ENST00000379143 CNEP1R1Q8N9A8 125 aa10.63□□□□□ -0.71
PCNA-201ENST00000379143 SCAIQ8N9R8 606 aa10.63□□□□□ -0.71
PCNA-201ENST00000379143 PIK3C3Q8NEB9 887 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms