RNA–Protein interactions for RNA: ENST00000378543.2

FAAP20-201, Transcript of FA core complex associated protein 20, humanhuman

TSL 2

Gene FAAP20, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAAP20-201ENST00000378543 PIF1Q9H611 641 aa20.77■□□□□ 0.92
FAAP20-201ENST00000378543 SLC13A4Q9UKG4 626 aa20.77■□□□□ 0.92
FAAP20-201ENST00000378543 USF3Q68DE3 2245 aa20.77■□□□□ 0.91
FAAP20-201ENST00000378543 IGHV3-9P01782 118 aa20.76■□□□□ 0.91
FAAP20-201ENST00000378543 GPIP06744 558 aa20.76■□□□□ 0.91
FAAP20-201ENST00000378543 IDUAP35475 653 aa20.76■□□□□ 0.91
FAAP20-201ENST00000378543 KLF10Q13118 480 aa20.76■□□□□ 0.91
FAAP20-201ENST00000378543 STK11Q15831 433 aa20.76■□□□□ 0.91
FAAP20-201ENST00000378543 MMEL1Q495T6 779 aa20.76■□□□□ 0.91
FAAP20-201ENST00000378543 INTS11Q5TA45 600 aaKnown RBP20.76■□□□□ 0.91
FAAP20-201ENST00000378543 C6orf89Q6UWU4 347 aa20.76■□□□□ 0.91
FAAP20-201ENST00000378543 ARMC8Q8IUR7 673 aa20.76■□□□□ 0.91
FAAP20-201ENST00000378543 PCYOX1LQ8NBM8 494 aa20.76■□□□□ 0.91
FAAP20-201ENST00000378543 OR8J3Q8NGG0 315 aa20.76■□□□□ 0.91
FAAP20-201ENST00000378543 LILRB1Q8NHL6 650 aaPredicted RBP20.76■□□□□ 0.91
FAAP20-201ENST00000378543 STK35Q8TDR2 534 aa20.76■□□□□ 0.91
FAAP20-201ENST00000378543 DNAJA4Q8WW22 397 aaPredicted RBP20.76■□□□□ 0.91
FAAP20-201ENST00000378543 C3orf49Q96BT1 292 aa20.76■□□□□ 0.91
FAAP20-201ENST00000378543 NGBQ9NPG2 151 aa20.76■□□□□ 0.91
FAAP20-201ENST00000378543 TESQ9UGI8 421 aaKnown RBP20.76■□□□□ 0.91
FAAP20-201ENST00000378543 RNF115Q9Y4L5 304 aa20.76■□□□□ 0.91
FAAP20-201ENST00000378543 FBP2O00757 339 aa20.75■□□□□ 0.91
FAAP20-201ENST00000378543 C8BP07358 591 aa20.75■□□□□ 0.91
FAAP20-201ENST00000378543 PTH2RP49190 550 aa20.75■□□□□ 0.91
FAAP20-201ENST00000378543 PCBP3P57721 371 aaKnown RBP20.75■□□□□ 0.91
FAAP20-201ENST00000378543 MTPNP58546 118 aa20.75■□□□□ 0.91
FAAP20-201ENST00000378543 FBXW9Q5XUX1 488 aa20.75■□□□□ 0.91
FAAP20-201ENST00000378543 YTHDF3Q7Z739 585 aaKnown RBP20.75■□□□□ 0.91
FAAP20-201ENST00000378543 PTOV1Q86YD1 416 aa20.75■□□□□ 0.91
FAAP20-201ENST00000378543 APH1AQ96BI3 265 aa20.75■□□□□ 0.91
FAAP20-201ENST00000378543 GSX2Q9BZM3 304 aa20.75■□□□□ 0.91
FAAP20-201ENST00000378543 TRIM2Q9C040 744 aa20.75■□□□□ 0.91
FAAP20-201ENST00000378543 ESRP2Q9H6T0 727 aaKnown RBP20.75■□□□□ 0.91
FAAP20-201ENST00000378543 RPS6KB2Q9UBS0 482 aa20.75■□□□□ 0.91
FAAP20-201ENST00000378543 CAPN7Q9Y6W3 813 aa20.75■□□□□ 0.91
FAAP20-201ENST00000378543 DPRXA6NFQ7 191 aa20.74■□□□□ 0.91
FAAP20-201ENST00000378543 CLOCKO15516 846 aa20.74■□□□□ 0.91
FAAP20-201ENST00000378543 CD3EP07766 207 aa20.74■□□□□ 0.91
FAAP20-201ENST00000378543 PNMTP11086 282 aa20.74■□□□□ 0.91
FAAP20-201ENST00000378543 PRG2P13727 222 aa20.74■□□□□ 0.91
FAAP20-201ENST00000378543 FAM91A1Q658Y4 838 aa20.74■□□□□ 0.91
FAAP20-201ENST00000378543 ADAM5Q6NVV9 412 aa20.74■□□□□ 0.91
FAAP20-201ENST00000378543 PRSS57Q6UWY2 283 aa20.74■□□□□ 0.91
FAAP20-201ENST00000378543 PATL1Q86TB9 770 aaKnown RBP20.74■□□□□ 0.91
FAAP20-201ENST00000378543 UBE2J2Q8N2K1 259 aa20.74■□□□□ 0.91
FAAP20-201ENST00000378543 ZNF433Q8N7K0 673 aaPredicted RBP20.74■□□□□ 0.91
FAAP20-201ENST00000378543 TMEM171Q8WVE6 324 aa20.74■□□□□ 0.91
FAAP20-201ENST00000378543 RASSF5Q8WWW0 418 aa20.74■□□□□ 0.91
FAAP20-201ENST00000378543 NEUROG1Q92886 237 aa20.74■□□□□ 0.91
FAAP20-201ENST00000378543 LRRC58Q96CX6 371 aa20.74■□□□□ 0.91
FAAP20-201ENST00000378543 Q96MF0 132 aa20.74■□□□□ 0.91
FAAP20-201ENST00000378543 SF3B5Q9BWJ5 86 aaKnown RBP20.74■□□□□ 0.91
FAAP20-201ENST00000378543 TAPBPLQ9BX59 468 aa20.74■□□□□ 0.91
FAAP20-201ENST00000378543 PARPBPQ9NWS1 579 aa20.74■□□□□ 0.91
FAAP20-201ENST00000378543 GID8Q9NWU2 228 aa20.74■□□□□ 0.91
FAAP20-201ENST00000378543 LIPT2A6NK58 231 aa20.73■□□□□ 0.91
FAAP20-201ENST00000378543 TMEM229AB2RXF0 380 aa20.73■□□□□ 0.91
FAAP20-201ENST00000378543 CCDC22O60826 627 aa20.73■□□□□ 0.91
FAAP20-201ENST00000378543 NPIPB7O75200 414 aa20.73■□□□□ 0.91
FAAP20-201ENST00000378543 MRPL33O75394 65 aaKnown RBP20.73■□□□□ 0.91
FAAP20-201ENST00000378543 MFN2O95140 757 aa20.73■□□□□ 0.91
FAAP20-201ENST00000378543 VAMP5O95183 116 aa20.73■□□□□ 0.91
FAAP20-201ENST00000378543 INHBBP09529 407 aa20.73■□□□□ 0.91
FAAP20-201ENST00000378543 GGT1P19440 569 aa20.73■□□□□ 0.91
FAAP20-201ENST00000378543 PCGF2P35227 344 aa20.73■□□□□ 0.91
FAAP20-201ENST00000378543 NCALDP61601 193 aa20.73■□□□□ 0.91
FAAP20-201ENST00000378543 BSPH1Q075Z2 132 aa20.73■□□□□ 0.91
FAAP20-201ENST00000378543 PPA1Q15181 289 aa20.73■□□□□ 0.91
FAAP20-201ENST00000378543 NANOGP8Q6NSW7 305 aa20.73■□□□□ 0.91
FAAP20-201ENST00000378543 BIVMQ86UB2 503 aa20.73■□□□□ 0.91
FAAP20-201ENST00000378543 C10orf82Q8WW14 230 aa20.73■□□□□ 0.91
FAAP20-201ENST00000378543 NANOGQ9H9S0 305 aa20.73■□□□□ 0.91
FAAP20-201ENST00000378543 SLC9A8Q9Y2E8 581 aa20.73■□□□□ 0.91
FAAP20-201ENST00000378543 AP3M1Q9Y2T2 418 aa20.73■□□□□ 0.91
FAAP20-201ENST00000378543 OR5H1A6NKK0 313 aa20.72■□□□□ 0.91
FAAP20-201ENST00000378543 MRASO14807 208 aa20.72■□□□□ 0.91
FAAP20-201ENST00000378543 FMO6PO60774 539 aa20.72■□□□□ 0.91
FAAP20-201ENST00000378543 FOXG1P55316 489 aaPredicted RBP20.72■□□□□ 0.91
FAAP20-201ENST00000378543 BNIP2Q12982 314 aa20.72■□□□□ 0.91
FAAP20-201ENST00000378543 CEACAM7Q14002 265 aa20.72■□□□□ 0.91
FAAP20-201ENST00000378543 TIMM23BQ5SRD1 257 aa20.72■□□□□ 0.91
FAAP20-201ENST00000378543 SWT1Q5T5J6 900 aaKnown RBP20.72■□□□□ 0.91
FAAP20-201ENST00000378543 C1orf140Q5VVS0 124 aa20.72■□□□□ 0.91
FAAP20-201ENST00000378543 ULK3Q6PHR2 472 aa20.72■□□□□ 0.91
FAAP20-201ENST00000378543 RANBP3LQ86VV4 465 aaPredicted RBP20.72■□□□□ 0.91
FAAP20-201ENST00000378543 CIARTQ8N365 385 aaPredicted RBP20.72■□□□□ 0.91
FAAP20-201ENST00000378543 OR10A6Q8NH74 314 aa20.72■□□□□ 0.91
FAAP20-201ENST00000378543 POM121Q96HA1 1249 aa20.72■□□□□ 0.91
FAAP20-201ENST00000378543 ZNF701Q9NV72 531 aaPredicted RBP20.72■□□□□ 0.91
FAAP20-201ENST00000378543 SELENONQ9NZV5 590 aa20.72■□□□□ 0.91
FAAP20-201ENST00000378543 FLVCR1Q9Y5Y0 555 aa20.72■□□□□ 0.91
FAAP20-201ENST00000378543 ELOA3DA6NLF2 546 aaPredicted RBP20.71■□□□□ 0.91
FAAP20-201ENST00000378543 OR2T1O43869 369 aa20.71■□□□□ 0.91
FAAP20-201ENST00000378543 RAD51DO75771 328 aa20.71■□□□□ 0.91
FAAP20-201ENST00000378543 PAX1P15863 534 aa20.71■□□□□ 0.91
FAAP20-201ENST00000378543 AQP1P29972 269 aa20.71■□□□□ 0.91
FAAP20-201ENST00000378543 RGS8P57771 180 aaPredicted RBP20.71■□□□□ 0.91
FAAP20-201ENST00000378543 FAPQ12884 760 aa20.71■□□□□ 0.91
FAAP20-201ENST00000378543 SELPLGQ14242 412 aa20.71■□□□□ 0.91
FAAP20-201ENST00000378543 SLC17A1Q14916 467 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms