RNA–Protein interactions for RNA: ENST00000378406.5

CCDC107-202, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC107, Length 1,016 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-202ENST00000378406 SKP2Q13309 424 aa17.19■□□□□ 0.34
CCDC107-202ENST00000378406 PDK3Q15120 406 aa17.19■□□□□ 0.34
CCDC107-202ENST00000378406 PDZK1Q5T2W1 519 aa17.19■□□□□ 0.34
CCDC107-202ENST00000378406 LRIF1Q5T3J3 769 aa17.19■□□□□ 0.34
CCDC107-202ENST00000378406 DLEU7Q6UYE1 221 aa17.19■□□□□ 0.34
CCDC107-202ENST00000378406 UBE2J2Q8N2K1 259 aa17.19■□□□□ 0.34
CCDC107-202ENST00000378406 AURKBQ96GD4 344 aaPredicted RBP17.19■□□□□ 0.34
CCDC107-202ENST00000378406 SLC35G5Q96KT7 338 aa17.19■□□□□ 0.34
CCDC107-202ENST00000378406 THUMPD3Q9BV44 507 aaKnown RBP17.19■□□□□ 0.34
CCDC107-202ENST00000378406 EFCAB1Q9HAE3 211 aa17.19■□□□□ 0.34
CCDC107-202ENST00000378406 EMC3Q9P0I2 261 aa17.19■□□□□ 0.34
CCDC107-202ENST00000378406 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.19■□□□□ 0.34
CCDC107-202ENST00000378406 CIB4A0PJX0 185 aa17.18■□□□□ 0.34
CCDC107-202ENST00000378406 SERINC4A6NH21 518 aa17.18■□□□□ 0.34
CCDC107-202ENST00000378406 M0R1B8 84 aa17.18■□□□□ 0.34
CCDC107-202ENST00000378406 SULT2B1O00204 365 aa17.18■□□□□ 0.34
CCDC107-202ENST00000378406 KRT75O95678 551 aa17.18■□□□□ 0.34
CCDC107-202ENST00000378406 C1QCP02747 245 aa17.18■□□□□ 0.34
CCDC107-202ENST00000378406 KRT16P08779 473 aa17.18■□□□□ 0.34
CCDC107-202ENST00000378406 USF1P22415 310 aaPredicted RBP17.18■□□□□ 0.34
CCDC107-202ENST00000378406 IGFBP5P24593 272 aa17.18■□□□□ 0.34
CCDC107-202ENST00000378406 NTF4P34130 210 aa17.18■□□□□ 0.34
CCDC107-202ENST00000378406 FOXG1P55316 489 aaPredicted RBP17.18■□□□□ 0.34
CCDC107-202ENST00000378406 SESN3P58005 492 aa17.18■□□□□ 0.34
CCDC107-202ENST00000378406 CSNK2A1P68400 391 aaPredicted RBP17.18■□□□□ 0.34
CCDC107-202ENST00000378406 TRMT5Q32P41 509 aaKnown RBP17.18■□□□□ 0.34
CCDC107-202ENST00000378406 SYT14P1Q58G82 188 aa17.18■□□□□ 0.34
CCDC107-202ENST00000378406 SAXO2Q658L1 398 aa17.18■□□□□ 0.34
CCDC107-202ENST00000378406 ZNF544Q6NX49 715 aa17.18■□□□□ 0.34
CCDC107-202ENST00000378406 RNF130Q86XS8 419 aa17.18■□□□□ 0.34
CCDC107-202ENST00000378406 MSRB3Q8IXL7 192 aa17.18■□□□□ 0.34
CCDC107-202ENST00000378406 PNPT1Q8TCS8 783 aaKnown RBP17.18■□□□□ 0.34
CCDC107-202ENST00000378406 ST8SIA1Q92185 356 aa17.18■□□□□ 0.34
CCDC107-202ENST00000378406 APH1AQ96BI3 265 aa17.18■□□□□ 0.34
CCDC107-202ENST00000378406 NEURL3Q96EH8 262 aa17.18■□□□□ 0.34
CCDC107-202ENST00000378406 NSL1Q96IY1 281 aa17.18■□□□□ 0.34
CCDC107-202ENST00000378406 OR7D2Q96RA2 312 aa17.18■□□□□ 0.34
CCDC107-202ENST00000378406 SDF2Q99470 211 aa17.18■□□□□ 0.34
CCDC107-202ENST00000378406 LAT2Q9GZY6 243 aa17.18■□□□□ 0.34
CCDC107-202ENST00000378406 TPT1P8Q9HAU6 139 aa17.18■□□□□ 0.34
CCDC107-202ENST00000378406 GID8Q9NWU2 228 aa17.18■□□□□ 0.34
CCDC107-202ENST00000378406 SLC25A37Q9NYZ2 338 aa17.18■□□□□ 0.34
CCDC107-202ENST00000378406 VAPAQ9P0L0 249 aa17.18■□□□□ 0.34
CCDC107-202ENST00000378406 KCNE5Q9UJ90 142 aa17.18■□□□□ 0.34
CCDC107-202ENST00000378406 NOSIPQ9Y314 301 aaKnown RBP17.18■□□□□ 0.34
CCDC107-202ENST00000378406 CENPVL1A0A0U1RR11 272 aa17.17■□□□□ 0.34
CCDC107-202ENST00000378406 CCT8L1PA6NM43 557 aa17.17■□□□□ 0.34
CCDC107-202ENST00000378406 CLIC1O00299 241 aa17.17■□□□□ 0.34
CCDC107-202ENST00000378406 LY6HO94772 140 aa17.17■□□□□ 0.34
CCDC107-202ENST00000378406 CSF3P09919 207 aa17.17■□□□□ 0.34
CCDC107-202ENST00000378406 HOXB9P17482 250 aaPredicted RBP17.17■□□□□ 0.34
CCDC107-202ENST00000378406 MATN1P21941 496 aa17.17■□□□□ 0.34
CCDC107-202ENST00000378406 EFNA4P52798 201 aa17.17■□□□□ 0.34
CCDC107-202ENST00000378406 RPS26P62854 115 aaKnown RBP17.17■□□□□ 0.34
CCDC107-202ENST00000378406 LSM11P83369 360 aaKnown RBP eCLIP17.17■□□□□ 0.34
CCDC107-202ENST00000378406 GABRA6Q16445 453 aa17.17■□□□□ 0.34
CCDC107-202ENST00000378406 DEPDC4Q8N2C3 294 aa17.17■□□□□ 0.34
CCDC107-202ENST00000378406 OR5D16Q8NGK9 328 aa17.17■□□□□ 0.34
CCDC107-202ENST00000378406 LRRC58Q96CX6 371 aa17.17■□□□□ 0.34
CCDC107-202ENST00000378406 MUS81Q96NY9 551 aa17.17■□□□□ 0.34
CCDC107-202ENST00000378406 CGREF1Q99674 301 aa17.17■□□□□ 0.34
CCDC107-202ENST00000378406 C1QTNF6Q9BXI9 259 aa17.17■□□□□ 0.34
CCDC107-202ENST00000378406 SERINC1Q9NRX5 453 aa17.17■□□□□ 0.34
CCDC107-202ENST00000378406 ASB6Q9NWX5 421 aa17.17■□□□□ 0.34
CCDC107-202ENST00000378406 TAS2R16Q9NYV7 291 aa17.17■□□□□ 0.34
CCDC107-202ENST00000378406 MALT1Q9UDY8 824 aa17.17■□□□□ 0.34
CCDC107-202ENST00000378406 SVEP1Q4LDE5 3571 aa17.17■□□□□ 0.34
CCDC107-202ENST00000378406 HEATR1Q9H583 2144 aaKnown RBP17.17■□□□□ 0.34
CCDC107-202ENST00000378406 TRBV5-3A0A0A0MS03 114 aa17.16■□□□□ 0.34
CCDC107-202ENST00000378406 SLC35F4A4IF30 521 aa17.16■□□□□ 0.34
CCDC107-202ENST00000378406 CYP7B1O75881 506 aa17.16■□□□□ 0.34
CCDC107-202ENST00000378406 UBOX5O94941 541 aa17.16■□□□□ 0.34
CCDC107-202ENST00000378406 NPPAP01160 153 aa17.16■□□□□ 0.34
CCDC107-202ENST00000378406 ITGA5P08648 1049 aa17.16■□□□□ 0.34
CCDC107-202ENST00000378406 SRD5A1P18405 259 aa17.16■□□□□ 0.34
CCDC107-202ENST00000378406 NUDT2P50583 147 aa17.16■□□□□ 0.34
CCDC107-202ENST00000378406 MERTKQ12866 999 aa17.16■□□□□ 0.34
CCDC107-202ENST00000378406 ZNF141Q15928 474 aa17.16■□□□□ 0.34
CCDC107-202ENST00000378406 RUNDC3AQ59EK9 446 aa17.16■□□□□ 0.34
CCDC107-202ENST00000378406 IL17RELQ6ZVW7 336 aa17.16■□□□□ 0.34
CCDC107-202ENST00000378406 SLC25A43Q8WUT9 341 aaPredicted RBP17.16■□□□□ 0.34
CCDC107-202ENST00000378406 OR51I1Q9H343 314 aa17.16■□□□□ 0.34
CCDC107-202ENST00000378406 ARFGEF3Q5TH69 2177 aa17.15■□□□□ 0.34
CCDC107-202ENST00000378406 VWC2LB2RUY7 222 aa17.15■□□□□ 0.34
CCDC107-202ENST00000378406 HAX1O00165 279 aa17.15■□□□□ 0.34
CCDC107-202ENST00000378406 PPIBP23284 216 aaKnown RBP17.15■□□□□ 0.34
CCDC107-202ENST00000378406 GZMKP49863 264 aa17.15■□□□□ 0.34
CCDC107-202ENST00000378406 GPR68Q15743 365 aa17.15■□□□□ 0.34
CCDC107-202ENST00000378406 COX20Q5RI15 118 aa17.15■□□□□ 0.34
CCDC107-202ENST00000378406 OR7E24Q6IFN5 339 aa17.15■□□□□ 0.34
CCDC107-202ENST00000378406 TNFAIP8L2Q6P589 184 aaPredicted RBP17.15■□□□□ 0.34
CCDC107-202ENST00000378406 WDR31Q8NA23 367 aa17.15■□□□□ 0.34
CCDC107-202ENST00000378406 TMEM234Q8WY98 164 aa17.15■□□□□ 0.34
CCDC107-202ENST00000378406 ROPN1LQ96C74 230 aa17.15■□□□□ 0.34
CCDC107-202ENST00000378406 ANKRD27Q96NW4 1050 aa17.15■□□□□ 0.34
CCDC107-202ENST00000378406 RAD21L1Q9H4I0 556 aa17.15■□□□□ 0.34
CCDC107-202ENST00000378406 SERHL2Q9H4I8 314 aa17.15■□□□□ 0.34
CCDC107-202ENST00000378406 ACER3Q9NUN7 267 aa17.15■□□□□ 0.34
CCDC107-202ENST00000378406 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.15■□□□□ 0.34
CCDC107-202ENST00000378406 ATP23Q9Y6H3 246 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms