RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 KLF11O14901 512 aa13.13□□□□□ -0.31
TRIM13-202ENST00000378182 ZNF264O43296 627 aa13.13□□□□□ -0.31
TRIM13-202ENST00000378182 CLDN1O95832 211 aa13.13□□□□□ -0.31
TRIM13-202ENST00000378182 OR8U8P0C7N1 319 aa13.13□□□□□ -0.31
TRIM13-202ENST00000378182 ERP29P30040 261 aaKnown RBP13.13□□□□□ -0.31
TRIM13-202ENST00000378182 TRMT61AQ96FX7 289 aaKnown RBP13.13□□□□□ -0.31
TRIM13-202ENST00000378182 UBL7Q96S82 380 aaPredicted RBP13.13□□□□□ -0.31
TRIM13-202ENST00000378182 MRI1Q9BV20 369 aa13.13□□□□□ -0.31
TRIM13-202ENST00000378182 SAV1Q9H4B6 383 aaPredicted RBP13.13□□□□□ -0.31
TRIM13-202ENST00000378182 UNKLQ9H9P5 680 aaKnown RBP13.13□□□□□ -0.31
TRIM13-202ENST00000378182 ZNF286AQ9HBT8 521 aa13.13□□□□□ -0.31
TRIM13-202ENST00000378182 QPCTLQ9NXS2 382 aa13.13□□□□□ -0.31
TRIM13-202ENST00000378182 MTCH1Q9NZJ7 389 aa13.13□□□□□ -0.31
TRIM13-202ENST00000378182 CROCCQ5TZA2 2017 aa13.13□□□□□ -0.31
TRIM13-202ENST00000378182 SLC31A2O15432 143 aa13.13□□□□□ -0.31
TRIM13-202ENST00000378182 ZNF789Q5FWF6 425 aa13.13□□□□□ -0.31
TRIM13-202ENST00000378182 OR13C2Q8NGS9 318 aa13.13□□□□□ -0.31
TRIM13-202ENST00000378182 CD200R1Q8TD46 325 aa13.13□□□□□ -0.31
TRIM13-202ENST00000378182 SNAPC3Q92966 411 aa13.13□□□□□ -0.31
TRIM13-202ENST00000378182 NMNAT2Q9BZQ4 307 aa13.13□□□□□ -0.31
TRIM13-202ENST00000378182 TSPAN11A1L157 253 aa13.13□□□□□ -0.31
TRIM13-202ENST00000378182 MYF5P13349 255 aa13.13□□□□□ -0.31
TRIM13-202ENST00000378182 CD68P34810 354 aaPredicted RBP13.13□□□□□ -0.31
TRIM13-202ENST00000378182 FOXA1P55317 472 aa13.13□□□□□ -0.31
TRIM13-202ENST00000378182 ZNF784Q8NCA9 323 aaPredicted RBP13.13□□□□□ -0.31
TRIM13-202ENST00000378182 EGLN1Q9GZT9 426 aa13.13□□□□□ -0.31
TRIM13-202ENST00000378182 SLC38A1Q9H2H9 487 aa13.13□□□□□ -0.31
TRIM13-202ENST00000378182 C1orf198Q9H425 327 aa13.13□□□□□ -0.31
TRIM13-202ENST00000378182 MAGIXQ9H6Y5 334 aa13.13□□□□□ -0.31
TRIM13-202ENST00000378182 FUOMA2VDF0 154 aa13.13□□□□□ -0.31
TRIM13-202ENST00000378182 CT45A6P0DMU7 189 aa13.13□□□□□ -0.31
TRIM13-202ENST00000378182 CT45A5P0DMU8 189 aa13.13□□□□□ -0.31
TRIM13-202ENST00000378182 CT45A7P0DMV0 189 aa13.13□□□□□ -0.31
TRIM13-202ENST00000378182 CT45A8P0DMV1 189 aa13.13□□□□□ -0.31
TRIM13-202ENST00000378182 CT45A9P0DMV2 189 aa13.13□□□□□ -0.31
TRIM13-202ENST00000378182 RAB11AP62491 216 aa13.13□□□□□ -0.31
TRIM13-202ENST00000378182 CT45A2Q5DJT8 189 aa13.13□□□□□ -0.31
TRIM13-202ENST00000378182 CT45A1Q5HYN5 189 aa13.13□□□□□ -0.31
TRIM13-202ENST00000378182 ZNF322Q6U7Q0 402 aaPredicted RBP13.13□□□□□ -0.31
TRIM13-202ENST00000378182 GFRALQ6UXV0 394 aa13.13□□□□□ -0.31
TRIM13-202ENST00000378182 CCDC71Q8IV32 467 aaPredicted RBP13.13□□□□□ -0.31
TRIM13-202ENST00000378182 SUMF2Q8NBJ7 301 aa13.13□□□□□ -0.31
TRIM13-202ENST00000378182 CT45A3Q8NHU0 189 aa13.13□□□□□ -0.31
TRIM13-202ENST00000378182 ZFPM2Q8WW38 1151 aa13.13□□□□□ -0.31
TRIM13-202ENST00000378182 ANKRD9Q96BM1 317 aaPredicted RBP13.13□□□□□ -0.31
TRIM13-202ENST00000378182 CCDC32Q9BV29 185 aa13.13□□□□□ -0.31
TRIM13-202ENST00000378182 OR6C2Q9NZP2 312 aa13.13□□□□□ -0.31
TRIM13-202ENST00000378182 PCDHGA5Q9Y5G8 931 aa13.13□□□□□ -0.31
TRIM13-202ENST00000378182 IGHV3-15A0A0B4J1V0 119 aa13.13□□□□□ -0.31
TRIM13-202ENST00000378182 CCR7P32248 378 aa13.13□□□□□ -0.31
TRIM13-202ENST00000378182 RAB13P51153 203 aa13.13□□□□□ -0.31
TRIM13-202ENST00000378182 GARNL3Q5VVW2 1013 aa13.13□□□□□ -0.31
TRIM13-202ENST00000378182 IGSF5Q9NSI5 407 aa13.13□□□□□ -0.31
TRIM13-202ENST00000378182 SLC6A5Q9Y345 797 aa13.13□□□□□ -0.31
TRIM13-202ENST00000378182 COL1A1P02452 1464 aaPredicted RBP13.12□□□□□ -0.31
TRIM13-202ENST00000378182 MON2Q7Z3U7 1717 aa13.12□□□□□ -0.31
TRIM13-202ENST00000378182 M0QZQ0 153 aa13.12□□□□□ -0.31
TRIM13-202ENST00000378182 NUDT1P36639 197 aa13.12□□□□□ -0.31
TRIM13-202ENST00000378182 NCS1P62166 190 aa13.12□□□□□ -0.31
TRIM13-202ENST00000378182 SELENOWP63302 87 aa13.12□□□□□ -0.31
TRIM13-202ENST00000378182 MGAT3Q09327 533 aa13.12□□□□□ -0.31
TRIM13-202ENST00000378182 MISPQ8IVT2 679 aa13.12□□□□□ -0.31
TRIM13-202ENST00000378182 CHDHQ8NE62 594 aaPredicted RBP13.12□□□□□ -0.31
TRIM13-202ENST00000378182 OR13H1Q8NG92 308 aa13.12□□□□□ -0.31
TRIM13-202ENST00000378182 AIFM1O95831 613 aa13.12□□□□□ -0.31
TRIM13-202ENST00000378182 NKX2-5P52952 324 aaPredicted RBP13.12□□□□□ -0.31
TRIM13-202ENST00000378182 GMLQ99445 158 aa13.12□□□□□ -0.31
TRIM13-202ENST00000378182 RNF212BA8MTL3 300 aa13.12□□□□□ -0.31
TRIM13-202ENST00000378182 GGT1P19440 569 aa13.12□□□□□ -0.31
TRIM13-202ENST00000378182 GK2Q14410 553 aaPredicted RBP13.12□□□□□ -0.31
TRIM13-202ENST00000378182 SPATS1Q496A3 300 aa13.12□□□□□ -0.31
TRIM13-202ENST00000378182 ACSM3Q53FZ2 586 aa13.12□□□□□ -0.31
TRIM13-202ENST00000378182 SSX9Q7RTT3 188 aa13.12□□□□□ -0.31
TRIM13-202ENST00000378182 COMMD7Q86VX2 200 aa13.12□□□□□ -0.31
TRIM13-202ENST00000378182 ENDOVQ8N8Q3 282 aaKnown RBP13.12□□□□□ -0.31
TRIM13-202ENST00000378182 OR5M9Q8NGP3 310 aa13.12□□□□□ -0.31
TRIM13-202ENST00000378182 OR5K2Q8NHB8 316 aa13.12□□□□□ -0.31
TRIM13-202ENST00000378182 CMTM2Q8TAZ6 248 aa13.12□□□□□ -0.31
TRIM13-202ENST00000378182 ZNF705GA8MUZ8 300 aaPredicted RBP13.12□□□□□ -0.31
TRIM13-202ENST00000378182 MSMO1Q15800 293 aa13.12□□□□□ -0.31
TRIM13-202ENST00000378182 ZNF181Q2M3W8 571 aa13.12□□□□□ -0.31
TRIM13-202ENST00000378182 PAPD4Q6PIY7 484 aaKnown RBP13.12□□□□□ -0.31
TRIM13-202ENST00000378182 SCD5Q86SK9 330 aa13.12□□□□□ -0.31
TRIM13-202ENST00000378182 CACNG6Q9BXT2 260 aa13.12□□□□□ -0.31
TRIM13-202ENST00000378182 ONECUT1Q9UBC0 465 aa13.12□□□□□ -0.31
TRIM13-202ENST00000378182 HNF1AP20823 631 aa13.12□□□□□ -0.31
TRIM13-202ENST00000378182 VWA2Q5GFL6 755 aa13.12□□□□□ -0.31
TRIM13-202ENST00000378182 SLC6A19Q695T7 634 aa13.12□□□□□ -0.31
TRIM13-202ENST00000378182 ANKRD16Q6P6B7 361 aa13.12□□□□□ -0.31
TRIM13-202ENST00000378182 PODNL1Q6PEZ8 512 aa13.12□□□□□ -0.31
TRIM13-202ENST00000378182 LGALS12Q96DT0 336 aa13.12□□□□□ -0.31
TRIM13-202ENST00000378182 SAP130Q9H0E3 1048 aa13.12□□□□□ -0.31
TRIM13-202ENST00000378182 TMEM9BQ9NQ34 198 aa13.12□□□□□ -0.31
TRIM13-202ENST00000378182 PRSS16Q9NQE7 514 aa13.12□□□□□ -0.31
TRIM13-202ENST00000378182 TRAF3IP2O43734 574 aaPredicted RBP13.12□□□□□ -0.31
TRIM13-202ENST00000378182 SLC35A1P78382 337 aa13.12□□□□□ -0.31
TRIM13-202ENST00000378182 MMP27Q9H306 513 aa13.12□□□□□ -0.31
TRIM13-202ENST00000378182 SEMA6CQ9H3T2 930 aa13.12□□□□□ -0.31
TRIM13-202ENST00000378182 FANCGO15287 622 aa13.11□□□□□ -0.31
TRIM13-202ENST00000378182 ZNF728P0DKX0 622 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms