RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 SEBOXQ9HB31 216 aaPredicted RBP10.96□□□□□ -0.65
NPHP4-202ENST00000378161 FZD3Q9NPG1 666 aa10.96□□□□□ -0.65
NPHP4-202ENST00000378161 SNX11Q9Y5W9 270 aa10.96□□□□□ -0.65
NPHP4-202ENST00000378161 C7orf77A4D0Y5 90 aa10.96□□□□□ -0.65
NPHP4-202ENST00000378161 SURF4O15260 269 aa10.96□□□□□ -0.65
NPHP4-202ENST00000378161 HPXP02790 462 aa10.96□□□□□ -0.65
NPHP4-202ENST00000378161 C8GP07360 202 aa10.96□□□□□ -0.65
NPHP4-202ENST00000378161 OR1D2P34982 312 aa10.96□□□□□ -0.65
NPHP4-202ENST00000378161 TAGLN2P37802 199 aaKnown RBP10.96□□□□□ -0.65
NPHP4-202ENST00000378161 GSK3AP49840 483 aa10.96□□□□□ -0.65
NPHP4-202ENST00000378161 C4orf17Q53FE4 359 aa10.96□□□□□ -0.65
NPHP4-202ENST00000378161 MS4A13Q5J8X5 152 aa10.96□□□□□ -0.65
NPHP4-202ENST00000378161 FAHD2BQ6P2I3 314 aaPredicted RBP10.96□□□□□ -0.65
NPHP4-202ENST00000378161 RD3Q7Z3Z2 195 aa10.96□□□□□ -0.65
NPHP4-202ENST00000378161 PRSS35Q8N3Z0 413 aa10.96□□□□□ -0.65
NPHP4-202ENST00000378161 SLC35G3Q8N808 338 aa10.96□□□□□ -0.65
NPHP4-202ENST00000378161 OR10A7Q8NGE5 316 aa10.96□□□□□ -0.65
NPHP4-202ENST00000378161 FAHD2AQ96GK7 314 aa10.96□□□□□ -0.65
NPHP4-202ENST00000378161 TOX2Q96NM4 488 aa10.96□□□□□ -0.65
NPHP4-202ENST00000378161 WFIKKN1Q96NZ8 548 aa10.96□□□□□ -0.65
NPHP4-202ENST00000378161 F2RL3Q96RI0 385 aa10.96□□□□□ -0.65
NPHP4-202ENST00000378161 EIF1AYO14602 144 aaKnown RBP10.96□□□□□ -0.66
NPHP4-202ENST00000378161 TPST2O60704 377 aa10.96□□□□□ -0.66
NPHP4-202ENST00000378161 SLC25A12O75746 678 aa10.96□□□□□ -0.66
NPHP4-202ENST00000378161 PEX11BO96011 259 aa10.96□□□□□ -0.66
NPHP4-202ENST00000378161 RPA2P15927 270 aa10.96□□□□□ -0.66
NPHP4-202ENST00000378161 ITGB7P26010 798 aa10.96□□□□□ -0.66
NPHP4-202ENST00000378161 EIF1AXP47813 144 aaKnown RBP10.96□□□□□ -0.66
NPHP4-202ENST00000378161 TGM3Q08188 693 aa10.96□□□□□ -0.66
NPHP4-202ENST00000378161 IKZF1Q13422 519 aa10.96□□□□□ -0.66
NPHP4-202ENST00000378161 COX15Q7KZN9 410 aa10.96□□□□□ -0.66
NPHP4-202ENST00000378161 BAP18Q8IXM2 172 aa10.96□□□□□ -0.66
NPHP4-202ENST00000378161 KCNRGQ8N5I3 272 aa10.96□□□□□ -0.66
NPHP4-202ENST00000378161 CHST14Q8NCH0 376 aa10.96□□□□□ -0.66
NPHP4-202ENST00000378161 OR2AK2Q8NG84 335 aa10.96□□□□□ -0.66
NPHP4-202ENST00000378161 OR4F15Q8NGB8 312 aa10.96□□□□□ -0.66
NPHP4-202ENST00000378161 DYRK2Q92630 601 aa10.96□□□□□ -0.66
NPHP4-202ENST00000378161 TBX5Q99593 518 aa10.96□□□□□ -0.66
NPHP4-202ENST00000378161 TEX101Q9BY14 249 aa10.96□□□□□ -0.66
NPHP4-202ENST00000378161 GABARAPL3Q9BY60 117 aa10.96□□□□□ -0.66
NPHP4-202ENST00000378161 CAMK2AQ9UQM7 478 aa10.96□□□□□ -0.66
NPHP4-202ENST00000378161 KDM4EB2RXH2 506 aaPredicted RBP10.95□□□□□ -0.66
NPHP4-202ENST00000378161 ANKRD66B4E2M5 251 aa10.95□□□□□ -0.66
NPHP4-202ENST00000378161 ACOT7O00154 380 aa10.95□□□□□ -0.66
NPHP4-202ENST00000378161 ZNF208O43345 1280 aa10.95□□□□□ -0.66
NPHP4-202ENST00000378161 HOXB5P09067 269 aa10.95□□□□□ -0.66
NPHP4-202ENST00000378161 SNRPCP09234 159 aaKnown RBP10.95□□□□□ -0.66
NPHP4-202ENST00000378161 PET100P0DJ07 73 aa10.95□□□□□ -0.66
NPHP4-202ENST00000378161 HOXA5P20719 270 aa10.95□□□□□ -0.66
NPHP4-202ENST00000378161 MTNR1AP48039 350 aa10.95□□□□□ -0.66
NPHP4-202ENST00000378161 FKBP1BP68106 108 aa10.95□□□□□ -0.66
NPHP4-202ENST00000378161 NKG7Q16617 165 aa10.95□□□□□ -0.66
NPHP4-202ENST00000378161 PLEKHN1Q494U1 663 aaPredicted RBP10.95□□□□□ -0.66
NPHP4-202ENST00000378161 ZNF836Q6ZNA1 936 aa10.95□□□□□ -0.66
NPHP4-202ENST00000378161 SLC30A8Q8IWU4 369 aa10.95□□□□□ -0.66
NPHP4-202ENST00000378161 SMIM12Q96EX1 92 aa10.95□□□□□ -0.66
NPHP4-202ENST00000378161 ATF6BQ99941 703 aa10.95□□□□□ -0.66
NPHP4-202ENST00000378161 ZNF430Q9H8G1 570 aaPredicted RBP10.95□□□□□ -0.66
NPHP4-202ENST00000378161 GULP1Q9UBP9 304 aa10.95□□□□□ -0.66
NPHP4-202ENST00000378161 PCDHGA5Q9Y5G8 931 aa10.95□□□□□ -0.66
NPHP4-202ENST00000378161 PRAMEF11O60813 436 aa10.95□□□□□ -0.66
NPHP4-202ENST00000378161 C1QAP02745 245 aa10.95□□□□□ -0.66
NPHP4-202ENST00000378161 ARG1P05089 322 aa10.95□□□□□ -0.66
NPHP4-202ENST00000378161 FOLR2P14207 255 aa10.95□□□□□ -0.66
NPHP4-202ENST00000378161 FDXRP22570 491 aa10.95□□□□□ -0.66
NPHP4-202ENST00000378161 CDKN2DP55273 166 aa10.95□□□□□ -0.66
NPHP4-202ENST00000378161 RPS24P62847 133 aaKnown RBP10.95□□□□□ -0.66
NPHP4-202ENST00000378161 H3F3AP84243 136 aa10.95□□□□□ -0.66
NPHP4-202ENST00000378161 PYY3Q5JQD4 70 aa10.95□□□□□ -0.66
NPHP4-202ENST00000378161 PRAMEF20Q5VT98 475 aa10.95□□□□□ -0.66
NPHP4-202ENST00000378161 SMARCD3Q6STE5 483 aa10.95□□□□□ -0.66
NPHP4-202ENST00000378161 GABRG1Q8N1C3 465 aa10.95□□□□□ -0.66
NPHP4-202ENST00000378161 FAM181AQ8N9Y4 354 aa10.95□□□□□ -0.66
NPHP4-202ENST00000378161 SLC30A7Q8NEW0 376 aa10.95□□□□□ -0.66
NPHP4-202ENST00000378161 IFI44Q8TCB0 444 aa10.95□□□□□ -0.66
NPHP4-202ENST00000378161 OR11A1Q9GZK7 315 aa10.95□□□□□ -0.66
NPHP4-202ENST00000378161 SEC61A2Q9H9S3 476 aa10.95□□□□□ -0.66
NPHP4-202ENST00000378161 CBLN4Q9NTU7 201 aa10.95□□□□□ -0.66
NPHP4-202ENST00000378161 MARCH4Q9P2E8 410 aaPredicted RBP10.95□□□□□ -0.66
NPHP4-202ENST00000378161 ZDHHC8Q9ULC8 765 aa10.95□□□□□ -0.66
NPHP4-202ENST00000378161 CHD5Q8TDI0 1954 aa10.95□□□□□ -0.66
NPHP4-202ENST00000378161 NR2F1P10589 423 aa10.95□□□□□ -0.66
NPHP4-202ENST00000378161 AGTR2P50052 363 aa10.95□□□□□ -0.66
NPHP4-202ENST00000378161 ELAVL1Q15717 326 aaKnown RBP10.95□□□□□ -0.66
NPHP4-202ENST00000378161 AWAT1Q58HT5 328 aa10.95□□□□□ -0.66
NPHP4-202ENST00000378161 NCR3LG1Q68D85 454 aa10.95□□□□□ -0.66
NPHP4-202ENST00000378161 GLDNQ6ZMI3 551 aaPredicted RBP10.95□□□□□ -0.66
NPHP4-202ENST00000378161 GPRIN1Q7Z2K8 1008 aa10.95□□□□□ -0.66
NPHP4-202ENST00000378161 LRRC18Q8N456 261 aa10.95□□□□□ -0.66
NPHP4-202ENST00000378161 BPIFA2Q96DR5 249 aa10.95□□□□□ -0.66
NPHP4-202ENST00000378161 TCTN2Q96GX1 697 aa10.95□□□□□ -0.66
NPHP4-202ENST00000378161 KIRREL1Q96J84 757 aa10.95□□□□□ -0.66
NPHP4-202ENST00000378161 LMAN1LQ9HAT1 526 aa10.95□□□□□ -0.66
NPHP4-202ENST00000378161 DOK5Q9P104 306 aa10.95□□□□□ -0.66
NPHP4-202ENST00000378161 LOC102724200A0A096LPH7 203 aaPredicted RBP10.95□□□□□ -0.66
NPHP4-202ENST00000378161 CYB5BO43169 146 aa10.95□□□□□ -0.66
NPHP4-202ENST00000378161 HLA-DQB1P01920 261 aa10.95□□□□□ -0.66
NPHP4-202ENST00000378161 HEXAP06865 529 aa10.95□□□□□ -0.66
NPHP4-202ENST00000378161 ATXN8OSP0DMR3 200 aa10.95□□□□□ -0.66
NPHP4-202ENST00000378161 DRD2P14416 443 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms