RNA–Protein interactions for RNA: ENST00000377027.1

C9orf85-202, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 3

Gene C9orf85, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-202ENST00000377027 XAGE5Q8WWM1 108 aa8.35□□□□□ -1.07
C9orf85-202ENST00000377027 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.35□□□□□ -1.07
C9orf85-202ENST00000377027 TESCQ96BS2 214 aa8.35□□□□□ -1.07
C9orf85-202ENST00000377027 ZBTB9Q96C00 473 aa8.35□□□□□ -1.07
C9orf85-202ENST00000377027 ROPN1LQ96C74 230 aa8.35□□□□□ -1.07
C9orf85-202ENST00000377027 NEURL3Q96EH8 262 aa8.35□□□□□ -1.07
C9orf85-202ENST00000377027 TRMT61AQ96FX7 289 aaKnown RBP8.35□□□□□ -1.07
C9orf85-202ENST00000377027 CACNG6Q9BXT2 260 aa8.35□□□□□ -1.07
C9orf85-202ENST00000377027 RSPO3Q9BXY4 272 aaPredicted RBP8.35□□□□□ -1.07
C9orf85-202ENST00000377027 EXOSC3Q9NQT5 275 aaKnown RBP8.35□□□□□ -1.07
C9orf85-202ENST00000377027 SLC6A13Q9NSD5 602 aa8.35□□□□□ -1.07
C9orf85-202ENST00000377027 CHRNA9Q9UGM1 479 aa8.35□□□□□ -1.07
C9orf85-202ENST00000377027 HAO1Q9UJM8 370 aa8.35□□□□□ -1.07
C9orf85-202ENST00000377027 WDR45Q9Y484 360 aa8.35□□□□□ -1.07
C9orf85-202ENST00000377027 TMEM82A0PJX8 343 aa8.34□□□□□ -1.07
C9orf85-202ENST00000377027 DUXAA6NLW8 204 aa8.34□□□□□ -1.07
C9orf85-202ENST00000377027 SSX4O60224 188 aa8.34□□□□□ -1.07
C9orf85-202ENST00000377027 LY6HO94772 140 aa8.34□□□□□ -1.07
C9orf85-202ENST00000377027 CPSF4O95639 269 aaKnown RBP8.34□□□□□ -1.07
C9orf85-202ENST00000377027 CCNA2P20248 432 aa8.34□□□□□ -1.07
C9orf85-202ENST00000377027 UQCRC2P22695 453 aa8.34□□□□□ -1.07
C9orf85-202ENST00000377027 CD40P25942 277 aa8.34□□□□□ -1.07
C9orf85-202ENST00000377027 TTKP33981 857 aa8.34□□□□□ -1.07
C9orf85-202ENST00000377027 APOBEC1P41238 236 aaKnown RBP8.34□□□□□ -1.07
C9orf85-202ENST00000377027 P2RY4P51582 365 aa8.34□□□□□ -1.07
C9orf85-202ENST00000377027 MVDP53602 400 aa8.34□□□□□ -1.07
C9orf85-202ENST00000377027 ABCE1P61221 599 aaKnown RBP8.34□□□□□ -1.07
C9orf85-202ENST00000377027 KCNJ10P78508 379 aa8.34□□□□□ -1.07
C9orf85-202ENST00000377027 CHI3L2Q15782 390 aa8.34□□□□□ -1.07
C9orf85-202ENST00000377027 TNFAIP8L3Q5GJ75 292 aa8.34□□□□□ -1.07
C9orf85-202ENST00000377027 C6orf52Q5T4I8 152 aa8.34□□□□□ -1.07
C9orf85-202ENST00000377027 TSPO2Q5TGU0 170 aa8.34□□□□□ -1.07
C9orf85-202ENST00000377027 C9orf135Q5VTT2 229 aa8.34□□□□□ -1.07
C9orf85-202ENST00000377027 C16orf62Q7Z3J2 963 aa8.34□□□□□ -1.07
C9orf85-202ENST00000377027 GRINAQ7Z429 371 aa8.34□□□□□ -1.07
C9orf85-202ENST00000377027 HIPK1Q86Z02 1210 aa8.34□□□□□ -1.07
C9orf85-202ENST00000377027 ZNF100Q8IYN0 542 aa8.34□□□□□ -1.07
C9orf85-202ENST00000377027 ZNF525Q8N782 197 aa8.34□□□□□ -1.07
C9orf85-202ENST00000377027 SLC25A43Q8WUT9 341 aaPredicted RBP8.34□□□□□ -1.07
C9orf85-202ENST00000377027 FAM168AQ92567 244 aa8.34□□□□□ -1.07
C9orf85-202ENST00000377027 APH1AQ96BI3 265 aa8.34□□□□□ -1.07
C9orf85-202ENST00000377027 CCDC115Q96NT0 180 aa8.34□□□□□ -1.07
C9orf85-202ENST00000377027 MUS81Q96NY9 551 aa8.34□□□□□ -1.07
C9orf85-202ENST00000377027 ZIM3Q96PE6 472 aa8.34□□□□□ -1.07
C9orf85-202ENST00000377027 PRPF18Q99633 342 aaKnown RBP8.34□□□□□ -1.07
C9orf85-202ENST00000377027 INPP5KQ9BT40 448 aa8.34□□□□□ -1.07
C9orf85-202ENST00000377027 TMEM109Q9BVC6 243 aa8.34□□□□□ -1.07
C9orf85-202ENST00000377027 C1QTNF6Q9BXI9 259 aa8.34□□□□□ -1.07
C9orf85-202ENST00000377027 ROPN1BQ9BZX4 212 aaPredicted RBP8.34□□□□□ -1.07
C9orf85-202ENST00000377027 ROPN1Q9HAT0 212 aaPredicted RBP8.34□□□□□ -1.07
C9orf85-202ENST00000377027 NGBQ9NPG2 151 aa8.34□□□□□ -1.07
C9orf85-202ENST00000377027 SLC7A10Q9NS82 523 aa8.34□□□□□ -1.07
C9orf85-202ENST00000377027 OSGIN1Q9UJX0 560 aa8.34□□□□□ -1.07
C9orf85-202ENST00000377027 SLC35A3Q9Y2D2 325 aa8.34□□□□□ -1.07
C9orf85-202ENST00000377027 NOSIPQ9Y314 301 aaKnown RBP8.34□□□□□ -1.07
C9orf85-202ENST00000377027 CHST2Q9Y4C5 530 aa8.34□□□□□ -1.07
C9orf85-202ENST00000377027 FLVCR1Q9Y5Y0 555 aa8.34□□□□□ -1.07
C9orf85-202ENST00000377027 TMED7-TICAM2A0A0A6YYA0 188 aa8.33□□□□□ -1.08
C9orf85-202ENST00000377027 PRSS51A0A1B0GVH4 220 aa8.33□□□□□ -1.08
C9orf85-202ENST00000377027 AGAP5A6NIR3 686 aa8.33□□□□□ -1.08
C9orf85-202ENST00000377027 SDHDO14521 159 aa8.33□□□□□ -1.08
C9orf85-202ENST00000377027 TLX2O43763 284 aaPredicted RBP8.33□□□□□ -1.08
C9orf85-202ENST00000377027 HPXP02790 462 aa8.33□□□□□ -1.08
C9orf85-202ENST00000377027 SERPINE1P05121 402 aa8.33□□□□□ -1.08
C9orf85-202ENST00000377027 TFPIP10646 304 aa8.33□□□□□ -1.08
C9orf85-202ENST00000377027 BGNP21810 368 aa8.33□□□□□ -1.08
C9orf85-202ENST00000377027 IDH2P48735 452 aaKnown RBP8.33□□□□□ -1.08
C9orf85-202ENST00000377027 KHKP50053 298 aa8.33□□□□□ -1.08
C9orf85-202ENST00000377027 NME5P56597 212 aa8.33□□□□□ -1.08
C9orf85-202ENST00000377027 UFM1P61960 85 aa8.33□□□□□ -1.08
C9orf85-202ENST00000377027 CSNK2A1P68400 391 aaPredicted RBP8.33□□□□□ -1.08
C9orf85-202ENST00000377027 LGALS3BPQ08380 585 aa8.33□□□□□ -1.08
C9orf85-202ENST00000377027 MAD2L1Q13257 205 aaPredicted RBP8.33□□□□□ -1.08
C9orf85-202ENST00000377027 SLC17A1Q14916 467 aa8.33□□□□□ -1.08
C9orf85-202ENST00000377027 MST1LQ2TV78 715 aa8.33□□□□□ -1.08
C9orf85-202ENST00000377027 TMEM249Q2WGJ8 235 aa8.33□□□□□ -1.08
C9orf85-202ENST00000377027 FAM174BQ3ZCQ3 159 aa8.33□□□□□ -1.08
C9orf85-202ENST00000377027 BHLHB9Q6PI77 547 aa8.33□□□□□ -1.08
C9orf85-202ENST00000377027 LINGO2Q7L985 606 aa8.33□□□□□ -1.08
C9orf85-202ENST00000377027 P2RY8Q86VZ1 359 aa8.33□□□□□ -1.08
C9orf85-202ENST00000377027 RNF130Q86XS8 419 aa8.33□□□□□ -1.08
C9orf85-202ENST00000377027 NUDCD3Q8IVD9 361 aa8.33□□□□□ -1.08
C9orf85-202ENST00000377027 TMEM234Q8WY98 164 aa8.33□□□□□ -1.08
C9orf85-202ENST00000377027 HS6ST2Q96MM7 605 aa8.33□□□□□ -1.08
C9orf85-202ENST00000377027 ZNF385AQ96PM9 386 aaKnown RBP8.33□□□□□ -1.08
C9orf85-202ENST00000377027 DHRS9Q9BPW9 319 aa8.33□□□□□ -1.08
C9orf85-202ENST00000377027 SLC35A5Q9BS91 424 aa8.33□□□□□ -1.08
C9orf85-202ENST00000377027 NUF2Q9BZD4 464 aa8.33□□□□□ -1.08
C9orf85-202ENST00000377027 DPY30Q9C005 99 aa8.33□□□□□ -1.08
C9orf85-202ENST00000377027 SLC17A5Q9NRA2 495 aa8.33□□□□□ -1.08
C9orf85-202ENST00000377027 POLE3Q9NRF9 147 aa8.33□□□□□ -1.08
C9orf85-202ENST00000377027 YAE1D1Q9NRH1 226 aa8.33□□□□□ -1.08
C9orf85-202ENST00000377027 SERINC1Q9NRX5 453 aa8.33□□□□□ -1.08
C9orf85-202ENST00000377027 CBLN4Q9NTU7 201 aa8.33□□□□□ -1.08
C9orf85-202ENST00000377027 PNPOQ9NVS9 261 aa8.33□□□□□ -1.08
C9orf85-202ENST00000377027 TAS2R16Q9NYV7 291 aa8.33□□□□□ -1.08
C9orf85-202ENST00000377027 MARCOQ9UEW3 520 aaPredicted RBP8.33□□□□□ -1.08
C9orf85-202ENST00000377027 TMED7Q9Y3B3 224 aa8.33□□□□□ -1.08
C9orf85-202ENST00000377027 HDGFL3Q9Y3E1 203 aa8.33□□□□□ -1.08
C9orf85-202ENST00000377027 RAP2CQ9Y3L5 183 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms