RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 PCDHGB7Q9Y5F8 929 aa18.46■□□□□ 0.55
VSX1-202ENST00000376709 VPS13AQ96RL7 3174 aa18.46■□□□□ 0.55
VSX1-202ENST00000376709 COL5A1P20908 1838 aaPredicted RBP18.46■□□□□ 0.55
VSX1-202ENST00000376709 ARID1BQ8NFD5 2236 aaPredicted RBP18.46■□□□□ 0.54
VSX1-202ENST00000376709 IDH3BO43837 385 aa18.45■□□□□ 0.54
VSX1-202ENST00000376709 MST1P26927 711 aa18.45■□□□□ 0.54
VSX1-202ENST00000376709 CASP3P42574 277 aa18.45■□□□□ 0.54
VSX1-202ENST00000376709 RFX2P48378 723 aa18.45■□□□□ 0.54
VSX1-202ENST00000376709 DHPSP49366 369 aaPredicted RBP18.45■□□□□ 0.54
VSX1-202ENST00000376709 IDNKQ5T6J7 187 aa18.45■□□□□ 0.54
VSX1-202ENST00000376709 CEACAM19Q7Z692 300 aa18.45■□□□□ 0.54
VSX1-202ENST00000376709 KMT5CQ86Y97 462 aa18.45■□□□□ 0.54
VSX1-202ENST00000376709 SLC35F2Q8IXU6 374 aa18.45■□□□□ 0.54
VSX1-202ENST00000376709 ABHD4Q8TB40 342 aa18.45■□□□□ 0.54
VSX1-202ENST00000376709 MOGAT1Q96PD6 335 aa18.45■□□□□ 0.54
VSX1-202ENST00000376709 ELF4Q99607 663 aaPredicted RBP18.45■□□□□ 0.54
VSX1-202ENST00000376709 SEMA5BQ9P283 1151 aa18.45■□□□□ 0.54
VSX1-202ENST00000376709 GRIP1Q9Y3R0 1128 aa18.45■□□□□ 0.54
VSX1-202ENST00000376709 FRYLO94915 3013 aa18.45■□□□□ 0.54
VSX1-202ENST00000376709 OR6C68A6NDL8 312 aa18.45■□□□□ 0.54
VSX1-202ENST00000376709 C19orf67A6NJJ6 358 aa18.45■□□□□ 0.54
VSX1-202ENST00000376709 HCRTR2O43614 444 aa18.45■□□□□ 0.54
VSX1-202ENST00000376709 SPI1P17947 270 aa18.45■□□□□ 0.54
VSX1-202ENST00000376709 MYL9P24844 172 aa18.45■□□□□ 0.54
VSX1-202ENST00000376709 SHC1P29353 583 aa18.45■□□□□ 0.54
VSX1-202ENST00000376709 AQP2P41181 271 aa18.45■□□□□ 0.54
VSX1-202ENST00000376709 TMED10P49755 219 aaKnown RBP18.45■□□□□ 0.54
VSX1-202ENST00000376709 IL18Q14116 193 aa18.45■□□□□ 0.54
VSX1-202ENST00000376709 FAM27D1Q5T7N8 215 aa18.45■□□□□ 0.54
VSX1-202ENST00000376709 SLC29A4Q7RTT9 530 aa18.45■□□□□ 0.54
VSX1-202ENST00000376709 ZPLD1Q8TCW7 415 aa18.45■□□□□ 0.54
VSX1-202ENST00000376709 SNX33Q8WV41 574 aa18.45■□□□□ 0.54
VSX1-202ENST00000376709 ZNF501Q96CX3 271 aaPredicted RBP18.45■□□□□ 0.54
VSX1-202ENST00000376709 GPX7Q96SL4 187 aaPredicted RBP18.45■□□□□ 0.54
VSX1-202ENST00000376709 SLC7A5P2Q9GIP4 190 aa18.45■□□□□ 0.54
VSX1-202ENST00000376709 VN1R1Q9GZP7 353 aa18.45■□□□□ 0.54
VSX1-202ENST00000376709 PPIL3Q9H2H8 161 aaKnown RBP18.45■□□□□ 0.54
VSX1-202ENST00000376709 MMP25Q9NPA2 562 aa18.45■□□□□ 0.54
VSX1-202ENST00000376709 ADAM30Q9UKF2 790 aa18.45■□□□□ 0.54
VSX1-202ENST00000376709 FER1L5A0AVI2 2057 aa18.44■□□□□ 0.54
VSX1-202ENST00000376709 TEX13CA0A0J9YWL9 993 aa18.44■□□□□ 0.54
VSX1-202ENST00000376709 IMPA2O14732 288 aa18.44■□□□□ 0.54
VSX1-202ENST00000376709 MAGEB4O15481 346 aaPredicted RBP18.44■□□□□ 0.54
VSX1-202ENST00000376709 IGF2P01344 180 aa18.44■□□□□ 0.54
VSX1-202ENST00000376709 NRG3P56975 720 aa18.44■□□□□ 0.54
VSX1-202ENST00000376709 ZNF117Q03924 483 aa18.44■□□□□ 0.54
VSX1-202ENST00000376709 PLCXD2Q0VAA5 305 aa18.44■□□□□ 0.54
VSX1-202ENST00000376709 ISXQ2M1V0 245 aa18.44■□□□□ 0.54
VSX1-202ENST00000376709 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.44■□□□□ 0.54
VSX1-202ENST00000376709 LYSMD4Q5XG99 296 aa18.44■□□□□ 0.54
VSX1-202ENST00000376709 DMKNQ6E0U4 476 aaPredicted RBP18.44■□□□□ 0.54
VSX1-202ENST00000376709 NR2C2APQ86WQ0 139 aa18.44■□□□□ 0.54
VSX1-202ENST00000376709 ACOT12Q8WYK0 555 aa18.44■□□□□ 0.54
VSX1-202ENST00000376709 GHSRQ92847 366 aa18.44■□□□□ 0.54
VSX1-202ENST00000376709 CCDC74AQ96AQ1 378 aa18.44■□□□□ 0.54
VSX1-202ENST00000376709 PGLYRP3Q96LB9 341 aa18.44■□□□□ 0.54
VSX1-202ENST00000376709 HIF3AQ9Y2N7 669 aa18.44■□□□□ 0.54
VSX1-202ENST00000376709 PDGFBP01127 241 aaPredicted RBP18.44■□□□□ 0.54
VSX1-202ENST00000376709 APEX1P27695 318 aaKnown RBP18.44■□□□□ 0.54
VSX1-202ENST00000376709 TACR3P29371 465 aa18.44■□□□□ 0.54
VSX1-202ENST00000376709 SLC6A8P48029 635 aa18.44■□□□□ 0.54
VSX1-202ENST00000376709 EVX1P49640 407 aa18.44■□□□□ 0.54
VSX1-202ENST00000376709 DIO1P49895 249 aa18.44■□□□□ 0.54
VSX1-202ENST00000376709 EGR4Q05215 589 aa18.44■□□□□ 0.54
VSX1-202ENST00000376709 ASAH1Q13510 395 aa18.44■□□□□ 0.54
VSX1-202ENST00000376709 ALG10Q5BKT4 473 aa18.44■□□□□ 0.54
VSX1-202ENST00000376709 SLC35D3Q5M8T2 416 aa18.44■□□□□ 0.54
VSX1-202ENST00000376709 YOD1Q5VVQ6 348 aaPredicted RBP18.44■□□□□ 0.54
VSX1-202ENST00000376709 HBMQ6B0K9 141 aa18.44■□□□□ 0.54
VSX1-202ENST00000376709 LEG1Q6P5S2 330 aa18.44■□□□□ 0.54
VSX1-202ENST00000376709 JAZF1Q86VZ6 243 aa18.44■□□□□ 0.54
VSX1-202ENST00000376709 ZNRF4Q8WWF5 429 aa18.44■□□□□ 0.54
VSX1-202ENST00000376709 RTN4RQ9BZR6 473 aa18.44■□□□□ 0.54
VSX1-202ENST00000376709 WWTR1Q9GZV5 400 aa18.44■□□□□ 0.54
VSX1-202ENST00000376709 LAT2Q9GZY6 243 aa18.44■□□□□ 0.54
VSX1-202ENST00000376709 SLC22A4Q9H015 551 aa18.44■□□□□ 0.54
VSX1-202ENST00000376709 ZNF768Q9H5H4 540 aaKnown RBP18.44■□□□□ 0.54
VSX1-202ENST00000376709 CTSFQ9UBX1 484 aa18.44■□□□□ 0.54
VSX1-202ENST00000376709 A0A1W2PRG6 482 aa18.43■□□□□ 0.54
VSX1-202ENST00000376709 NDUFB5O43674 189 aa18.43■□□□□ 0.54
VSX1-202ENST00000376709 SELENOFO60613 162 aa18.43■□□□□ 0.54
VSX1-202ENST00000376709 NUDT14O95848 222 aa18.43■□□□□ 0.54
VSX1-202ENST00000376709 SLC2A2P11168 524 aaPredicted RBP18.43■□□□□ 0.54
VSX1-202ENST00000376709 ITPKBP27987 946 aa18.43■□□□□ 0.54
VSX1-202ENST00000376709 GBX2P52951 348 aaPredicted RBP18.43■□□□□ 0.54
VSX1-202ENST00000376709 OR2B6P58173 313 aa18.43■□□□□ 0.54
VSX1-202ENST00000376709 METAP1DQ6UB28 335 aaPredicted RBP18.43■□□□□ 0.54
VSX1-202ENST00000376709 SYS1Q8N2H4 156 aa18.43■□□□□ 0.54
VSX1-202ENST00000376709 Q8N402 240 aa18.43■□□□□ 0.54
VSX1-202ENST00000376709 MS4A15Q8N5U1 240 aa18.43■□□□□ 0.54
VSX1-202ENST00000376709 OR1N1Q8NGS0 311 aa18.43■□□□□ 0.54
VSX1-202ENST00000376709 TP53INP1Q96A56 240 aa18.43■□□□□ 0.54
VSX1-202ENST00000376709 ZNF524Q96C55 264 aa18.43■□□□□ 0.54
VSX1-202ENST00000376709 Q96M85 177 aa18.43■□□□□ 0.54
VSX1-202ENST00000376709 TBL1XR1Q9BZK7 514 aa18.43■□□□□ 0.54
VSX1-202ENST00000376709 GNG8Q9UK08 70 aa18.43■□□□□ 0.54
VSX1-202ENST00000376709 WDR87Q6ZQQ6 2873 aa18.43■□□□□ 0.54
VSX1-202ENST00000376709 FAM25AB3EWG3 89 aa18.42■□□□□ 0.54
VSX1-202ENST00000376709 FAM25CB3EWG5 89 aa18.42■□□□□ 0.54
VSX1-202ENST00000376709 FAM25GB3EWG6 89 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms