RNA–Protein interactions for RNA: ENST00000376491.7

CLCN6-204, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 927 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-204ENST00000376491 BOD1Q96IK1 185 aa13.04□□□□□ -0.32
CLCN6-204ENST00000376491 OR52E6Q96RD3 313 aa13.04□□□□□ -0.32
CLCN6-204ENST00000376491 SF3B5Q9BWJ5 86 aaKnown RBP13.04□□□□□ -0.32
CLCN6-204ENST00000376491 SSU72Q9NP77 194 aaKnown RBP13.04□□□□□ -0.32
CLCN6-204ENST00000376491 PMF1-BGLAPU3KQ54 211 aa13.04□□□□□ -0.32
CLCN6-204ENST00000376491 CDHR4A6H8M9 788 aa13.03□□□□□ -0.32
CLCN6-204ENST00000376491 AQP7P3A6NL99 342 aa13.03□□□□□ -0.32
CLCN6-204ENST00000376491 SNUPNO95149 360 aaKnown RBP13.03□□□□□ -0.32
CLCN6-204ENST00000376491 F12P00748 615 aaPredicted RBP13.03□□□□□ -0.32
CLCN6-204ENST00000376491 GPIP06744 558 aa13.03□□□□□ -0.32
CLCN6-204ENST00000376491 DBIP07108 87 aaKnown RBP13.03□□□□□ -0.32
CLCN6-204ENST00000376491 CSF3P09919 207 aa13.03□□□□□ -0.32
CLCN6-204ENST00000376491 NR2F1P10589 423 aa13.03□□□□□ -0.32
CLCN6-204ENST00000376491 MVDP53602 400 aa13.03□□□□□ -0.32
CLCN6-204ENST00000376491 LSM11P83369 360 aaKnown RBP eCLIP13.03□□□□□ -0.32
CLCN6-204ENST00000376491 GSTA3Q16772 222 aa13.03□□□□□ -0.32
CLCN6-204ENST00000376491 TBRG1Q3YBR2 411 aa13.03□□□□□ -0.32
CLCN6-204ENST00000376491 C1QTNF12Q5T7M4 302 aa13.03□□□□□ -0.32
CLCN6-204ENST00000376491 ZNF836Q6ZNA1 936 aa13.03□□□□□ -0.32
CLCN6-204ENST00000376491 TRIML2Q8N7C3 387 aa13.03□□□□□ -0.32
CLCN6-204ENST00000376491 POMGNT2Q8NAT1 580 aa13.03□□□□□ -0.32
CLCN6-204ENST00000376491 AURKBQ96GD4 344 aaPredicted RBP13.03□□□□□ -0.32
CLCN6-204ENST00000376491 SORCS2Q96PQ0 1159 aa13.03□□□□□ -0.32
CLCN6-204ENST00000376491 BEX2Q9BXY8 128 aa13.03□□□□□ -0.32
CLCN6-204ENST00000376491 SLC6A13Q9NSD5 602 aa13.03□□□□□ -0.32
CLCN6-204ENST00000376491 CHST2Q9Y4C5 530 aa13.03□□□□□ -0.32
CLCN6-204ENST00000376491 GPR45Q9Y5Y3 372 aa13.03□□□□□ -0.32
CLCN6-204ENST00000376491 IGHV1-18A0A0C4DH31 117 aa13.02□□□□□ -0.33
CLCN6-204ENST00000376491 SLC35F4A4IF30 521 aa13.02□□□□□ -0.33
CLCN6-204ENST00000376491 TM9SF1O15321 606 aa13.02□□□□□ -0.33
CLCN6-204ENST00000376491 RGS16O15492 202 aaPredicted RBP13.02□□□□□ -0.33
CLCN6-204ENST00000376491 LMX1BO60663 402 aa13.02□□□□□ -0.33
CLCN6-204ENST00000376491 WNT11O96014 354 aa13.02□□□□□ -0.33
CLCN6-204ENST00000376491 BMP4P12644 408 aa13.02□□□□□ -0.33
CLCN6-204ENST00000376491 CXCR1P25024 350 aa13.02□□□□□ -0.33
CLCN6-204ENST00000376491 SELENOPP49908 381 aa13.02□□□□□ -0.33
CLCN6-204ENST00000376491 ANXA11P50995 505 aaKnown RBP13.02□□□□□ -0.33
CLCN6-204ENST00000376491 TXNL4AP83876 142 aaKnown RBP13.02□□□□□ -0.33
CLCN6-204ENST00000376491 BST1Q10588 318 aa13.02□□□□□ -0.33
CLCN6-204ENST00000376491 STX3Q13277 289 aa13.02□□□□□ -0.33
CLCN6-204ENST00000376491 GNA13Q14344 377 aa13.02□□□□□ -0.33
CLCN6-204ENST00000376491 KRTAP24-1Q3LI83 254 aa13.02□□□□□ -0.33
CLCN6-204ENST00000376491 TNFAIP8L3Q5GJ75 292 aa13.02□□□□□ -0.33
CLCN6-204ENST00000376491 KLHL24Q6TFL4 600 aa13.02□□□□□ -0.33
CLCN6-204ENST00000376491 LINGO2Q7L985 606 aa13.02□□□□□ -0.33
CLCN6-204ENST00000376491 GPAT4Q86UL3 456 aa13.02□□□□□ -0.33
CLCN6-204ENST00000376491 PEX5LQ8IYB4 626 aa13.02□□□□□ -0.33
CLCN6-204ENST00000376491 CLIP4Q8N3C7 705 aa13.02□□□□□ -0.33
CLCN6-204ENST00000376491 CADM2Q8N3J6 435 aa13.02□□□□□ -0.33
CLCN6-204ENST00000376491 MREGQ8N565 214 aa13.02□□□□□ -0.33
CLCN6-204ENST00000376491 OR1K1Q8NGR3 316 aa13.02□□□□□ -0.33
CLCN6-204ENST00000376491 OR52P1PQ8NH57 321 aa13.02□□□□□ -0.33
CLCN6-204ENST00000376491 ZBTB9Q96C00 473 aa13.02□□□□□ -0.33
CLCN6-204ENST00000376491 PIF1Q9H611 641 aa13.02□□□□□ -0.33
CLCN6-204ENST00000376491 ADPRHL2Q9NX46 363 aa13.02□□□□□ -0.33
CLCN6-204ENST00000376491 DSPPQ9NZW4 1301 aa13.02□□□□□ -0.33
CLCN6-204ENST00000376491 FRS3O43559 492 aa13.01□□□□□ -0.33
CLCN6-204ENST00000376491 LGI1O95970 557 aa13.01□□□□□ -0.33
CLCN6-204ENST00000376491 PRG2P13727 222 aa13.01□□□□□ -0.33
CLCN6-204ENST00000376491 UQCRBP14927 111 aa13.01□□□□□ -0.33
CLCN6-204ENST00000376491 IGFBP5P24593 272 aa13.01□□□□□ -0.33
CLCN6-204ENST00000376491 TMEM225Q6GV28 225 aa13.01□□□□□ -0.33
CLCN6-204ENST00000376491 WDR93Q6P2C0 686 aa13.01□□□□□ -0.33
CLCN6-204ENST00000376491 CREB3L2Q70SY1 520 aa13.01□□□□□ -0.33
CLCN6-204ENST00000376491 SPATA19Q7Z5L4 167 aa13.01□□□□□ -0.33
CLCN6-204ENST00000376491 EPHX4Q8IUS5 362 aa13.01□□□□□ -0.33
CLCN6-204ENST00000376491 ZNF440Q8IYI8 595 aa13.01□□□□□ -0.33
CLCN6-204ENST00000376491 KIRREL3Q8IZU9 778 aa13.01□□□□□ -0.33
CLCN6-204ENST00000376491 SLC38A2Q96QD8 506 aa13.01□□□□□ -0.33
CLCN6-204ENST00000376491 PRR14Q9BWN1 585 aa13.01□□□□□ -0.33
CLCN6-204ENST00000376491 SHARPINQ9H0F6 387 aa13.01□□□□□ -0.33
CLCN6-204ENST00000376491 NELFAQ9H3P2 528 aa13.01□□□□□ -0.33
CLCN6-204ENST00000376491 WDR55Q9H6Y2 383 aaPredicted RBP13.01□□□□□ -0.33
CLCN6-204ENST00000376491 OBP2BQ9NPH6 170 aa13.01□□□□□ -0.33
CLCN6-204ENST00000376491 TMEM45AQ9NWC5 275 aa13.01□□□□□ -0.33
CLCN6-204ENST00000376491 LPAR3Q9UBY5 353 aa13.01□□□□□ -0.33
CLCN6-204ENST00000376491 IGHV4-61A0A0C4DH41 118 aa13□□□□□ -0.33
CLCN6-204ENST00000376491 A8MVM7 634 aa13□□□□□ -0.33
CLCN6-204ENST00000376491 NR5A2O00482 541 aa13□□□□□ -0.33
CLCN6-204ENST00000376491 NPIPB7O75200 414 aa13□□□□□ -0.33
CLCN6-204ENST00000376491 UPK3AO75631 287 aa13□□□□□ -0.33
CLCN6-204ENST00000376491 KRT75O95678 551 aa13□□□□□ -0.33
CLCN6-204ENST00000376491 TFPTP0C1Z6 253 aa13□□□□□ -0.33
CLCN6-204ENST00000376491 ETFAP13804 333 aa13□□□□□ -0.33
CLCN6-204ENST00000376491 EPHA3P29320 983 aa13□□□□□ -0.33
CLCN6-204ENST00000376491 NR4A2P43354 598 aa13□□□□□ -0.33
CLCN6-204ENST00000376491 GZMKP49863 264 aa13□□□□□ -0.33
CLCN6-204ENST00000376491 PDLIM4P50479 330 aa13□□□□□ -0.33
CLCN6-204ENST00000376491 TUBA1BP68363 451 aa13□□□□□ -0.33
CLCN6-204ENST00000376491 TUBA4AP68366 448 aa13□□□□□ -0.33
CLCN6-204ENST00000376491 SRSF2Q01130 221 aaKnown RBP13□□□□□ -0.33
CLCN6-204ENST00000376491 GGTLC2Q14390 218 aa13□□□□□ -0.33
CLCN6-204ENST00000376491 GTDC1Q4AE62 458 aa13□□□□□ -0.33
CLCN6-204ENST00000376491 LIN52Q52LA3 116 aa13□□□□□ -0.33
CLCN6-204ENST00000376491 RPS26P11Q5JNZ5 115 aaPredicted RBP13□□□□□ -0.33
CLCN6-204ENST00000376491 WBP2NLQ6ICG8 309 aa13□□□□□ -0.33
CLCN6-204ENST00000376491 IL17RELQ6ZVW7 336 aa13□□□□□ -0.33
CLCN6-204ENST00000376491 TUBA1AQ71U36 451 aa13□□□□□ -0.33
CLCN6-204ENST00000376491 ANKS4BQ8N8V4 417 aa13□□□□□ -0.33
CLCN6-204ENST00000376491 BCL2L2Q92843 193 aaPredicted RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms