RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 ZNF565Q8N9K5 539 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 OR7G2Q8NG99 324 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 ZFAND1Q8TCF1 268 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 FGF13Q92913 245 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 FCRL1Q96LA6 429 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 OR1F2PQ96R84 312 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 AIFM2Q9BRQ8 373 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 UBQLN3Q9H347 655 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 KCNS2Q9ULS6 477 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 ANKRD36A6QL64 1941 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 KDM4EB2RXH2 506 aaPredicted RBP6.06□□□□□ -1.44
SMC1A-202ENST00000375340 ATP6V1G2-DDX39BF2Z307 99 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 LDOC1O95751 146 aaPredicted RBP6.06□□□□□ -1.44
SMC1A-202ENST00000375340 ERCC1P07992 297 aaPredicted RBP6.06□□□□□ -1.44
SMC1A-202ENST00000375340 PVALBP20472 110 aaPredicted RBP6.06□□□□□ -1.44
SMC1A-202ENST00000375340 ACTBP60709 375 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 ACTG1P63261 375 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 MELKQ14680 651 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 OR7E24Q6IFN5 339 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 ALG12Q9BV10 488 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 NPIPA2E9PIF3 369 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 NPIPA3F8WFD2 350 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 PET100P0DJ07 73 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 THEGLP0DJG4 465 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 NTSR1P30989 418 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 HERV-K104P61576 105 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 DYRK1AQ13627 763 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 ELOCQ15369 112 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 SLC9A3R2Q15599 337 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 DUSP5Q16690 384 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 FAM27D1Q5T7N8 215 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 METAP1DQ6UB28 335 aaPredicted RBP6.06□□□□□ -1.44
SMC1A-202ENST00000375340 CREB3L2Q70SY1 520 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 TMUB2Q71RG4 321 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 MCEMP1Q8IX19 187 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 GTPBP8Q8N3Z3 284 aaPredicted RBP6.06□□□□□ -1.44
SMC1A-202ENST00000375340 POTEKPQ9BYX7 375 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 ICKQ9UPZ9 632 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 ZNF593O00488 134 aaPredicted RBP6.06□□□□□ -1.44
SMC1A-202ENST00000375340 SEMA4FO95754 770 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 PMP2P02689 132 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 CA3P07451 260 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 F3P13726 295 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 PRKAR1BP31321 381 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 CSNK2A1P68400 391 aaPredicted RBP6.06□□□□□ -1.44
SMC1A-202ENST00000375340 TSC22D1Q15714 1073 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 TRMT12Q53H54 448 aaKnown RBP6.06□□□□□ -1.44
SMC1A-202ENST00000375340 NIPAL3Q6P499 406 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 CCDC190Q86UF4 302 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 NLRP8Q86W28 1048 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 CSNK2A3Q8NEV1 391 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 GPR148Q8TDV2 347 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 CDC6Q99741 560 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 NKX3-1Q99801 234 aaPredicted RBP6.06□□□□□ -1.44
SMC1A-202ENST00000375340 FTSJ1Q9UET6 329 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 CFIP05156 583 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 AGTR1P30556 359 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 SFTPDP35247 375 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 CLDN20P56880 219 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 PXDC1Q5TGL8 231 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 LAS2Q8IYD9 372 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 HHIPQ96QV1 700 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 OR2A14Q96R47 310 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 CCSO14618 274 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 FZD6O60353 706 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 HTR3BO95264 441 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 PRMT2P55345 433 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 ZNF77Q15935 545 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 WBP2NLQ6ICG8 309 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 SLC35F3Q8IY50 421 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 ZNF440Q8IYI8 595 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 OR52B4Q8NGK2 314 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 RBPMSQ93062 196 aaKnown RBP6.05□□□□□ -1.44
SMC1A-202ENST00000375340 ADOQ96SZ5 270 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 ZMAT3Q9HA38 289 aaKnown RBP6.05□□□□□ -1.44
SMC1A-202ENST00000375340 MED17Q9NVC6 651 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 SPHK1Q9NYA1 384 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 SLC6A5Q9Y345 797 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 ARID1BQ8NFD5 2236 aaPredicted RBP6.05□□□□□ -1.44
SMC1A-202ENST00000375340 H0Y8X5 98 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 DSCR3O14972 297 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 PRAF2O60831 178 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 ALX3O95076 343 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 RNASE10Q5GAN6 216 aaKnown RBP6.05□□□□□ -1.44
SMC1A-202ENST00000375340 LRRC69Q6ZNQ3 347 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 ANKRD53Q8N9V6 530 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 PLPP7Q8NBV4 271 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 SIDT1Q9NXL6 827 aaKnown RBP6.05□□□□□ -1.44
SMC1A-202ENST00000375340 CCDC163A0A0D9SF12 145 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 A0A1B0GWA3 101 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 RAB3AP20336 220 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 CDK2P24941 298 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 S100A2P29034 98 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 ZFP36L2P47974 494 aaKnown RBP6.05□□□□□ -1.44
SMC1A-202ENST00000375340 POU3F4P49335 361 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 GPR18Q14330 331 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 EEF1A1P5Q5VTE0 462 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 IDO2Q6ZQW0 420 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 MS4A6EQ96DS6 147 aa6.05□□□□□ -1.44
SMC1A-202ENST00000375340 ZDHHC12Q96GR4 267 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms