RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 TCEAL6Q6IPX3 200 aa16.37■□□□□ 0.21
HLA-DQB1-201ENST00000374943 B3GLCTQ6Y288 498 aa16.37■□□□□ 0.21
HLA-DQB1-201ENST00000374943 ZNF517Q6ZMY9 492 aaPredicted RBP16.37■□□□□ 0.21
HLA-DQB1-201ENST00000374943 C16orf47Q6ZP98 133 aaPredicted RBP16.37■□□□□ 0.21
HLA-DQB1-201ENST00000374943 FAM122BQ7Z309 247 aa16.37■□□□□ 0.21
HLA-DQB1-201ENST00000374943 GRINAQ7Z429 371 aa16.37■□□□□ 0.21
HLA-DQB1-201ENST00000374943 POMGNT2Q8NAT1 580 aa16.37■□□□□ 0.21
HLA-DQB1-201ENST00000374943 NPEPL1Q8NDH3 523 aa16.37■□□□□ 0.21
HLA-DQB1-201ENST00000374943 MOSPD2Q8NHP6 518 aa16.37■□□□□ 0.21
HLA-DQB1-201ENST00000374943 FNDC8Q8TC99 324 aa16.37■□□□□ 0.21
HLA-DQB1-201ENST00000374943 TCEAL3Q969E4 200 aa16.37■□□□□ 0.21
HLA-DQB1-201ENST00000374943 KATNB1Q9BVA0 655 aa16.37■□□□□ 0.21
HLA-DQB1-201ENST00000374943 NMNAT2Q9BZQ4 307 aa16.37■□□□□ 0.21
HLA-DQB1-201ENST00000374943 AKIRIN1Q9H9L7 192 aaPredicted RBP16.37■□□□□ 0.21
HLA-DQB1-201ENST00000374943 FBXL4Q9UKA2 621 aa16.37■□□□□ 0.21
HLA-DQB1-201ENST00000374943 A0A075B6Q4 140 aa16.36■□□□□ 0.21
HLA-DQB1-201ENST00000374943 DAPL1A0PJW8 107 aa16.36■□□□□ 0.21
HLA-DQB1-201ENST00000374943 C17orf51A8MQB3 221 aa16.36■□□□□ 0.21
HLA-DQB1-201ENST00000374943 BGLAPP02818 100 aa16.36■□□□□ 0.21
HLA-DQB1-201ENST00000374943 AQP2P41181 271 aa16.36■□□□□ 0.21
HLA-DQB1-201ENST00000374943 DLX5P56178 289 aa16.36■□□□□ 0.21
HLA-DQB1-201ENST00000374943 FBXW4P57775 412 aa16.36■□□□□ 0.21
HLA-DQB1-201ENST00000374943 GXYLT1Q4G148 440 aa16.36■□□□□ 0.21
HLA-DQB1-201ENST00000374943 PLA2G2CQ5R387 149 aa16.36■□□□□ 0.21
HLA-DQB1-201ENST00000374943 TUBA3EQ6PEY2 450 aa16.36■□□□□ 0.21
HLA-DQB1-201ENST00000374943 C10orf53Q8N6V4 93 aa16.36■□□□□ 0.21
HLA-DQB1-201ENST00000374943 TAAR8Q969N4 342 aa16.36■□□□□ 0.21
HLA-DQB1-201ENST00000374943 WDR70Q9NW82 654 aa16.36■□□□□ 0.21
HLA-DQB1-201ENST00000374943 ASB6Q9NWX5 421 aa16.36■□□□□ 0.21
HLA-DQB1-201ENST00000374943 TAS2R10Q9NYW0 307 aa16.36■□□□□ 0.21
HLA-DQB1-201ENST00000374943 VPS13AQ96RL7 3174 aa16.36■□□□□ 0.21
HLA-DQB1-201ENST00000374943 TRDV1A0A1B0GX56 115 aa16.35■□□□□ 0.21
HLA-DQB1-201ENST00000374943 ANKUB1A6NFN9 424 aa16.35■□□□□ 0.21
HLA-DQB1-201ENST00000374943 NPIPB7O75200 414 aa16.35■□□□□ 0.21
HLA-DQB1-201ENST00000374943 NUDT14O95848 222 aa16.35■□□□□ 0.21
HLA-DQB1-201ENST00000374943 MT-ATP6P00846 226 aa16.35■□□□□ 0.21
HLA-DQB1-201ENST00000374943 IL1AP01583 271 aa16.35■□□□□ 0.21
HLA-DQB1-201ENST00000374943 GALP22466 123 aa16.35■□□□□ 0.21
HLA-DQB1-201ENST00000374943 HTR3AP46098 478 aa16.35■□□□□ 0.21
HLA-DQB1-201ENST00000374943 TMED10P49755 219 aaKnown RBP16.35■□□□□ 0.21
HLA-DQB1-201ENST00000374943 SLC16A1P53985 500 aa16.35■□□□□ 0.21
HLA-DQB1-201ENST00000374943 ERVK-25P63136 954 aa16.35■□□□□ 0.21
HLA-DQB1-201ENST00000374943 C17orf67Q0P5P2 114 aa16.35■□□□□ 0.21
HLA-DQB1-201ENST00000374943 PCOLCEQ15113 449 aa16.35■□□□□ 0.21
HLA-DQB1-201ENST00000374943 INAQ16352 499 aa16.35■□□□□ 0.21
HLA-DQB1-201ENST00000374943 ALG10Q5BKT4 473 aa16.35■□□□□ 0.21
HLA-DQB1-201ENST00000374943 EMC4Q5J8M3 183 aa16.35■□□□□ 0.21
HLA-DQB1-201ENST00000374943 C5orf46Q6UWT4 87 aa16.35■□□□□ 0.21
HLA-DQB1-201ENST00000374943 LYPD8Q6UX82 237 aa16.35■□□□□ 0.21
HLA-DQB1-201ENST00000374943 NANOGNBQ7Z5D8 188 aa16.35■□□□□ 0.21
HLA-DQB1-201ENST00000374943 OR10H4Q8NGA5 316 aa16.35■□□□□ 0.21
HLA-DQB1-201ENST00000374943 DUSP19Q8WTR2 217 aa16.35■□□□□ 0.21
HLA-DQB1-201ENST00000374943 SMPDL3BQ92485 455 aa16.35■□□□□ 0.21
HLA-DQB1-201ENST00000374943 ATOH1Q92858 354 aaPredicted RBP16.35■□□□□ 0.21
HLA-DQB1-201ENST00000374943 C8orf44Q96CB5 159 aa16.35■□□□□ 0.21
HLA-DQB1-201ENST00000374943 MED18Q9BUE0 208 aa16.35■□□□□ 0.21
HLA-DQB1-201ENST00000374943 MYOTQ9UBF9 498 aa16.35■□□□□ 0.21
HLA-DQB1-201ENST00000374943 PEX16Q9Y5Y5 336 aa16.35■□□□□ 0.21
HLA-DQB1-201ENST00000374943 TMED7-TICAM2A0A0A6YYA0 188 aa16.34■□□□□ 0.21
HLA-DQB1-201ENST00000374943 C9J4A7 227 aa16.34■□□□□ 0.21
HLA-DQB1-201ENST00000374943 BLOC1S5-TXNDC5H3BN57 136 aa16.34■□□□□ 0.21
HLA-DQB1-201ENST00000374943 TAF4O00268 1085 aa16.34■□□□□ 0.21
HLA-DQB1-201ENST00000374943 ZNF12P17014 697 aa16.34■□□□□ 0.21
HLA-DQB1-201ENST00000374943 SDHAP31040 664 aa16.34■□□□□ 0.21
HLA-DQB1-201ENST00000374943 RPS19P39019 145 aaKnown RBP16.34■□□□□ 0.21
HLA-DQB1-201ENST00000374943 SLC25A1P53007 311 aa16.34■□□□□ 0.21
HLA-DQB1-201ENST00000374943 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.34■□□□□ 0.21
HLA-DQB1-201ENST00000374943 COL28A1Q2UY09 1125 aa16.34■□□□□ 0.21
HLA-DQB1-201ENST00000374943 GPALPP1Q8IXQ4 340 aa16.34■□□□□ 0.21
HLA-DQB1-201ENST00000374943 ATP6V1C2Q8NEY4 427 aa16.34■□□□□ 0.21
HLA-DQB1-201ENST00000374943 STK35Q8TDR2 534 aa16.34■□□□□ 0.21
HLA-DQB1-201ENST00000374943 ELP5Q8TE02 316 aa16.34■□□□□ 0.21
HLA-DQB1-201ENST00000374943 RHBDD1Q8TEB9 315 aa16.34■□□□□ 0.21
HLA-DQB1-201ENST00000374943 THAP3Q8WTV1 239 aaPredicted RBP16.34■□□□□ 0.21
HLA-DQB1-201ENST00000374943 TMEM234Q8WY98 164 aa16.34■□□□□ 0.21
HLA-DQB1-201ENST00000374943 ST8SIA1Q92185 356 aa16.34■□□□□ 0.21
HLA-DQB1-201ENST00000374943 MR1Q95460 341 aa16.34■□□□□ 0.21
HLA-DQB1-201ENST00000374943 RASD2Q96D21 266 aa16.34■□□□□ 0.21
HLA-DQB1-201ENST00000374943 PTDSS2Q9BVG9 487 aa16.34■□□□□ 0.21
HLA-DQB1-201ENST00000374943 C6orf62Q9GZU0 229 aaPredicted RBP16.34■□□□□ 0.21
HLA-DQB1-201ENST00000374943 KLHL1Q9NR64 748 aa16.34■□□□□ 0.21
HLA-DQB1-201ENST00000374943 BABAM2Q9NXR7 383 aa16.34■□□□□ 0.21
HLA-DQB1-201ENST00000374943 YARS2Q9Y2Z4 477 aaKnown RBP16.34■□□□□ 0.21
HLA-DQB1-201ENST00000374943 TMED7Q9Y3B3 224 aa16.34■□□□□ 0.21
HLA-DQB1-201ENST00000374943 NOX1Q9Y5S8 564 aa16.34■□□□□ 0.21
HLA-DQB1-201ENST00000374943 LNP1A1A4G5 178 aa16.34■□□□□ 0.21
HLA-DQB1-201ENST00000374943 SLC25A12O75746 678 aa16.34■□□□□ 0.21
HLA-DQB1-201ENST00000374943 MT-ND5P03915 603 aa16.34■□□□□ 0.21
HLA-DQB1-201ENST00000374943 GYPBP06028 91 aa16.34■□□□□ 0.21
HLA-DQB1-201ENST00000374943 AVPR2P30518 371 aa16.34■□□□□ 0.21
HLA-DQB1-201ENST00000374943 DIO1P49895 249 aa16.34■□□□□ 0.21
HLA-DQB1-201ENST00000374943 ZNF85Q03923 595 aa16.34■□□□□ 0.21
HLA-DQB1-201ENST00000374943 RPL18Q07020 188 aaKnown RBP16.34■□□□□ 0.21
HLA-DQB1-201ENST00000374943 VASNQ6EMK4 673 aa16.34■□□□□ 0.21
HLA-DQB1-201ENST00000374943 KLBQ86Z14 1044 aa16.34■□□□□ 0.21
HLA-DQB1-201ENST00000374943 ARIH2OSQ8N7S6 290 aa16.34■□□□□ 0.21
HLA-DQB1-201ENST00000374943 SLC22A8Q8TCC7 542 aa16.34■□□□□ 0.21
HLA-DQB1-201ENST00000374943 PMEPA1Q969W9 287 aa16.34■□□□□ 0.21
HLA-DQB1-201ENST00000374943 C1GALT1C1Q96EU7 318 aa16.34■□□□□ 0.21
HLA-DQB1-201ENST00000374943 KCTD7Q96MP8 289 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms