RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 ADGRL4Q9HBW9 690 aa18.95■□□□□ 0.62
TMEFF1-201ENST00000374879 TREM1Q9NP99 234 aa18.95■□□□□ 0.62
TMEFF1-201ENST00000374879 ABT1Q9ULW3 272 aaKnown RBP18.95■□□□□ 0.62
TMEFF1-201ENST00000374879 ZNF337Q9Y3M9 751 aa18.95■□□□□ 0.62
TMEFF1-201ENST00000374879 DYRK1BQ9Y463 629 aa18.95■□□□□ 0.62
TMEFF1-201ENST00000374879 MPIP34949 423 aa18.94■□□□□ 0.62
TMEFF1-201ENST00000374879 SP3Q02447 781 aa18.94■□□□□ 0.62
TMEFF1-201ENST00000374879 PCGF3Q3KNV8 242 aa18.94■□□□□ 0.62
TMEFF1-201ENST00000374879 TXNDC8Q6A555 127 aa18.94■□□□□ 0.62
TMEFF1-201ENST00000374879 FCRLBQ6BAA4 426 aa18.94■□□□□ 0.62
TMEFF1-201ENST00000374879 RNF122Q9H9V4 155 aa18.94■□□□□ 0.62
TMEFF1-201ENST00000374879 ZNF729A6NN14 1252 aaPredicted RBP18.94■□□□□ 0.62
TMEFF1-201ENST00000374879 C1orf196B1AJZ1 125 aa18.94■□□□□ 0.62
TMEFF1-201ENST00000374879 PLPP1O14494 284 aa18.94■□□□□ 0.62
TMEFF1-201ENST00000374879 BNIP3LO60238 219 aa18.94■□□□□ 0.62
TMEFF1-201ENST00000374879 FADS1O60427 444 aa18.94■□□□□ 0.62
TMEFF1-201ENST00000374879 SOCS5O75159 536 aa18.94■□□□□ 0.62
TMEFF1-201ENST00000374879 EFEMP2O95967 443 aa18.94■□□□□ 0.62
TMEFF1-201ENST00000374879 SRMP19623 302 aa18.94■□□□□ 0.62
TMEFF1-201ENST00000374879 ABCD3P28288 659 aa18.94■□□□□ 0.62
TMEFF1-201ENST00000374879 PDHA2P29803 388 aa18.94■□□□□ 0.62
TMEFF1-201ENST00000374879 ZNF311Q5JNZ3 666 aa18.94■□□□□ 0.62
TMEFF1-201ENST00000374879 LHX8Q68G74 356 aa18.94■□□□□ 0.62
TMEFF1-201ENST00000374879 PWWP2BQ6NUJ5 590 aa18.94■□□□□ 0.62
TMEFF1-201ENST00000374879 PAQR8Q8TEZ7 354 aa18.94■□□□□ 0.62
TMEFF1-201ENST00000374879 SCAMP4Q969E2 229 aa18.94■□□□□ 0.62
TMEFF1-201ENST00000374879 TMEM159Q96B96 161 aa18.94■□□□□ 0.62
TMEFF1-201ENST00000374879 LYSMD1Q96S90 227 aa18.94■□□□□ 0.62
TMEFF1-201ENST00000374879 PDCD1LG2Q9BQ51 273 aa18.94■□□□□ 0.62
TMEFF1-201ENST00000374879 OR52D1Q9H346 318 aa18.94■□□□□ 0.62
TMEFF1-201ENST00000374879 BCL2L10Q9HD36 194 aa18.94■□□□□ 0.62
TMEFF1-201ENST00000374879 NOX4Q9NPH5 578 aa18.94■□□□□ 0.62
TMEFF1-201ENST00000374879 WBP1LQ9NX94 342 aa18.94■□□□□ 0.62
TMEFF1-201ENST00000374879 FBXL4Q9UKA2 621 aa18.94■□□□□ 0.62
TMEFF1-201ENST00000374879 CLEC4EQ9ULY5 219 aa18.94■□□□□ 0.62
TMEFF1-201ENST00000374879 TNFSF18Q9UNG2 199 aa18.94■□□□□ 0.62
TMEFF1-201ENST00000374879 KCNE3Q9Y6H6 103 aa18.94■□□□□ 0.62
TMEFF1-201ENST00000374879 SMAD9O15198 467 aaKnown RBP18.93■□□□□ 0.62
TMEFF1-201ENST00000374879 TSPAN6O43657 245 aa18.93■□□□□ 0.62
TMEFF1-201ENST00000374879 FXYD6P3P58550 94 aa18.93■□□□□ 0.62
TMEFF1-201ENST00000374879 TAS2R20P59543 309 aa18.93■□□□□ 0.62
TMEFF1-201ENST00000374879 ACTR1AP61163 376 aa18.93■□□□□ 0.62
TMEFF1-201ENST00000374879 ATXN7L3Q14CW9 347 aaPredicted RBP18.93■□□□□ 0.62
TMEFF1-201ENST00000374879 DECR1Q16698 335 aa18.93■□□□□ 0.62
TMEFF1-201ENST00000374879 NDUFAF6Q330K2 333 aa18.93■□□□□ 0.62
TMEFF1-201ENST00000374879 RNF212Q495C1 297 aa18.93■□□□□ 0.62
TMEFF1-201ENST00000374879 LRRC37A5PQ49AS3 106 aa18.93■□□□□ 0.62
TMEFF1-201ENST00000374879 IGSF21Q96ID5 467 aa18.93■□□□□ 0.62
TMEFF1-201ENST00000374879 MFRPQ9BY79 579 aa18.93■□□□□ 0.62
TMEFF1-201ENST00000374879 FKRPQ9H9S5 495 aa18.93■□□□□ 0.62
TMEFF1-201ENST00000374879 ZCCHC3Q9NUD5 404 aaKnown RBP18.93■□□□□ 0.62
TMEFF1-201ENST00000374879 OR5H14A6NHG9 310 aa18.93■□□□□ 0.62
TMEFF1-201ENST00000374879 TMIGD3P0DMS9 266 aaPredicted RBP18.93■□□□□ 0.62
TMEFF1-201ENST00000374879 DDX6P26196 483 aaKnown RBP eCLIP18.93■□□□□ 0.62
TMEFF1-201ENST00000374879 HSD17B2P37059 387 aa18.93■□□□□ 0.62
TMEFF1-201ENST00000374879 MAGEB1P43366 347 aa18.93■□□□□ 0.62
TMEFF1-201ENST00000374879 RBM39Q14498 530 aaKnown RBP18.93■□□□□ 0.62
TMEFF1-201ENST00000374879 GLT8D1Q68CQ7 371 aa18.93■□□□□ 0.62
TMEFF1-201ENST00000374879 ZNF813Q6ZN06 617 aa18.93■□□□□ 0.62
TMEFF1-201ENST00000374879 SUN3Q8TAQ9 357 aa18.93■□□□□ 0.62
TMEFF1-201ENST00000374879 WDR34Q96EX3 536 aa18.93■□□□□ 0.62
TMEFF1-201ENST00000374879 TCEAL7Q9BRU2 100 aa18.93■□□□□ 0.62
TMEFF1-201ENST00000374879 SEC11CQ9BY50 192 aa18.93■□□□□ 0.62
TMEFF1-201ENST00000374879 OR5V1Q9UGF6 321 aa18.93■□□□□ 0.62
TMEFF1-201ENST00000374879 PIN1P1O15428 100 aa18.92■□□□□ 0.62
TMEFF1-201ENST00000374879 PRKRAO75569 313 aaKnown RBP18.92■□□□□ 0.62
TMEFF1-201ENST00000374879 CLTBP09497 229 aa18.92■□□□□ 0.62
TMEFF1-201ENST00000374879 SERPINA4P29622 427 aa18.92■□□□□ 0.62
TMEFF1-201ENST00000374879 PRKAR1BP31321 381 aa18.92■□□□□ 0.62
TMEFF1-201ENST00000374879 MAPK8P45983 427 aa18.92■□□□□ 0.62
TMEFF1-201ENST00000374879 MRPS10P82664 201 aaKnown RBP18.92■□□□□ 0.62
TMEFF1-201ENST00000374879 COL9A2Q14055 689 aaPredicted RBP18.92■□□□□ 0.62
TMEFF1-201ENST00000374879 Q6ZNB5 142 aa18.92■□□□□ 0.62
TMEFF1-201ENST00000374879 MBOAT2Q6ZWT7 520 aa18.92■□□□□ 0.62
TMEFF1-201ENST00000374879 OR4A4PQ8NGN8 299 aa18.92■□□□□ 0.62
TMEFF1-201ENST00000374879 ARMC5Q96C12 935 aa18.92■□□□□ 0.62
TMEFF1-201ENST00000374879 SMIM19Q96E16 107 aa18.92■□□□□ 0.62
TMEFF1-201ENST00000374879 DCAF16Q9NXF7 216 aa18.92■□□□□ 0.62
TMEFF1-201ENST00000374879 SLC13A4Q9UKG4 626 aa18.92■□□□□ 0.62
TMEFF1-201ENST00000374879 RNF222A6NCQ9 220 aa18.92■□□□□ 0.62
TMEFF1-201ENST00000374879 SLC22A31A6NKX4 558 aa18.92■□□□□ 0.62
TMEFF1-201ENST00000374879 CLN5O75503 358 aa18.92■□□□□ 0.62
TMEFF1-201ENST00000374879 OR2F2O95006 317 aa18.92■□□□□ 0.62
TMEFF1-201ENST00000374879 GYPBP06028 91 aa18.92■□□□□ 0.62
TMEFF1-201ENST00000374879 ANXA2P07355 339 aaKnown RBP18.92■□□□□ 0.62
TMEFF1-201ENST00000374879 SPINT3P49223 89 aa18.92■□□□□ 0.62
TMEFF1-201ENST00000374879 PSMD4P55036 377 aaKnown RBP18.92■□□□□ 0.62
TMEFF1-201ENST00000374879 OR2F1Q13607 317 aa18.92■□□□□ 0.62
TMEFF1-201ENST00000374879 UNQ6126/PRO20091Q6UXV3 157 aa18.92■□□□□ 0.62
TMEFF1-201ENST00000374879 GDF7Q7Z4P5 450 aa18.92■□□□□ 0.62
TMEFF1-201ENST00000374879 WDSUB1Q8N9V3 476 aa18.92■□□□□ 0.62
TMEFF1-201ENST00000374879 OR51S1Q8NGJ8 323 aa18.92■□□□□ 0.62
TMEFF1-201ENST00000374879 CPNE2Q96FN4 548 aaPredicted RBP18.92■□□□□ 0.62
TMEFF1-201ENST00000374879 PFDN5Q99471 154 aa18.92■□□□□ 0.62
TMEFF1-201ENST00000374879 UQCC1Q9NVA1 299 aa18.92■□□□□ 0.62
TMEFF1-201ENST00000374879 ASF1AQ9Y294 204 aa18.92■□□□□ 0.62
TMEFF1-201ENST00000374879 OGG1O15527 345 aa18.91■□□□□ 0.62
TMEFF1-201ENST00000374879 FARS2O95363 451 aaKnown RBP18.91■□□□□ 0.62
TMEFF1-201ENST00000374879 LY86O95711 162 aa18.91■□□□□ 0.62
TMEFF1-201ENST00000374879 CDK5R1Q15078 307 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms