RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 SHISA7A6NL88 538 aa10.2□□□□□ -0.78
CCDC40-203ENST00000374877 PEX12O00623 359 aa10.2□□□□□ -0.78
CCDC40-203ENST00000374877 CTDSPLO15194 276 aa10.2□□□□□ -0.78
CCDC40-203ENST00000374877 CREBL2O60519 120 aaPredicted RBP10.2□□□□□ -0.78
CCDC40-203ENST00000374877 HOXB2P14652 356 aa10.2□□□□□ -0.78
CCDC40-203ENST00000374877 NDUFS1P28331 727 aa10.2□□□□□ -0.78
CCDC40-203ENST00000374877 MAGEB1P43366 347 aa10.2□□□□□ -0.78
CCDC40-203ENST00000374877 ARFIP1P53367 373 aa10.2□□□□□ -0.78
CCDC40-203ENST00000374877 EPHA4P54764 986 aa10.2□□□□□ -0.78
CCDC40-203ENST00000374877 EEF1A1P68104 462 aaKnown RBP10.2□□□□□ -0.78
CCDC40-203ENST00000374877 ID2Q02363 134 aa10.2□□□□□ -0.78
CCDC40-203ENST00000374877 LINC00303Q3SY05 128 aa10.2□□□□□ -0.78
CCDC40-203ENST00000374877 AGBL4Q5VU57 503 aa10.2□□□□□ -0.78
CCDC40-203ENST00000374877 DEFB123Q8N688 67 aa10.2□□□□□ -0.78
CCDC40-203ENST00000374877 ZNF614Q8N883 585 aa10.2□□□□□ -0.78
CCDC40-203ENST00000374877 C1orf216Q8TAB5 229 aa10.2□□□□□ -0.78
CCDC40-203ENST00000374877 FCAMRQ8WWV6 532 aa10.2□□□□□ -0.78
CCDC40-203ENST00000374877 COX14Q96I36 57 aa10.2□□□□□ -0.78
CCDC40-203ENST00000374877 SYNPO2LQ9H987 977 aa10.2□□□□□ -0.78
CCDC40-203ENST00000374877 NRIP3Q9NQ35 241 aa10.2□□□□□ -0.78
CCDC40-203ENST00000374877 A0A1W2PQF6 199 aa10.2□□□□□ -0.78
CCDC40-203ENST00000374877 TCRBV16S1A1N1A0A5B0 115 aa10.2□□□□□ -0.78
CCDC40-203ENST00000374877 NARSO43776 548 aaKnown RBP10.2□□□□□ -0.78
CCDC40-203ENST00000374877 ECDO95905 644 aaPredicted RBP10.2□□□□□ -0.78
CCDC40-203ENST00000374877 IFNA16P05015 189 aa10.2□□□□□ -0.78
CCDC40-203ENST00000374877 NMBP08949 121 aa10.2□□□□□ -0.78
CCDC40-203ENST00000374877 IL32P24001 234 aa10.2□□□□□ -0.78
CCDC40-203ENST00000374877 MAZP56270 477 aaKnown RBP10.2□□□□□ -0.78
CCDC40-203ENST00000374877 SIRPAP78324 504 aa10.2□□□□□ -0.78
CCDC40-203ENST00000374877 STX4Q12846 297 aa10.2□□□□□ -0.78
CCDC40-203ENST00000374877 CCINQ13939 588 aa10.2□□□□□ -0.78
CCDC40-203ENST00000374877 GLDNQ6ZMI3 551 aaPredicted RBP10.2□□□□□ -0.78
CCDC40-203ENST00000374877 HDDC3Q8N4P3 179 aa10.2□□□□□ -0.78
CCDC40-203ENST00000374877 KCT2Q8NC54 265 aa10.2□□□□□ -0.78
CCDC40-203ENST00000374877 FAM71CQ8NEG0 241 aa10.2□□□□□ -0.78
CCDC40-203ENST00000374877 OR52E2Q8NGJ4 325 aa10.2□□□□□ -0.78
CCDC40-203ENST00000374877 OR4K13Q8NH42 304 aa10.2□□□□□ -0.78
CCDC40-203ENST00000374877 CNOT9Q92600 299 aaKnown RBP10.2□□□□□ -0.78
CCDC40-203ENST00000374877 FBXW5Q969U6 566 aa10.2□□□□□ -0.78
CCDC40-203ENST00000374877 SDF2Q99470 211 aa10.2□□□□□ -0.78
CCDC40-203ENST00000374877 GINS4Q9BRT9 223 aa10.2□□□□□ -0.78
CCDC40-203ENST00000374877 SARGQ9BW04 601 aa10.2□□□□□ -0.78
CCDC40-203ENST00000374877 NANSQ9NR45 359 aa10.2□□□□□ -0.78
CCDC40-203ENST00000374877 POT1Q9NUX5 634 aa10.2□□□□□ -0.78
CCDC40-203ENST00000374877 TAS2R10Q9NYW0 307 aa10.2□□□□□ -0.78
CCDC40-203ENST00000374877 BAIAP2Q9UQB8 552 aa10.2□□□□□ -0.78
CCDC40-203ENST00000374877 IGLON5A6NGN9 336 aa10.2□□□□□ -0.78
CCDC40-203ENST00000374877 PSMD9O00233 223 aa10.2□□□□□ -0.78
CCDC40-203ENST00000374877 LPLP06858 475 aa10.2□□□□□ -0.78
CCDC40-203ENST00000374877 GIPP09681 153 aaPredicted RBP10.2□□□□□ -0.78
CCDC40-203ENST00000374877 UCHL1P09936 223 aa10.2□□□□□ -0.78
CCDC40-203ENST00000374877 ICAM2P13598 275 aa10.2□□□□□ -0.78
CCDC40-203ENST00000374877 SLC2A5P22732 501 aa10.2□□□□□ -0.78
CCDC40-203ENST00000374877 DCTDP32321 178 aa10.2□□□□□ -0.78
CCDC40-203ENST00000374877 AMZ1Q400G9 498 aa10.2□□□□□ -0.78
CCDC40-203ENST00000374877 TMEM69Q5SWH9 247 aa10.2□□□□□ -0.78
CCDC40-203ENST00000374877 RPL13AP3Q6NVV1 102 aa10.2□□□□□ -0.78
CCDC40-203ENST00000374877 RNF113BQ8IZP6 322 aaKnown RBP10.2□□□□□ -0.78
CCDC40-203ENST00000374877 OR6V1Q8N148 313 aa10.2□□□□□ -0.78
CCDC40-203ENST00000374877 LRRC25Q8N386 305 aaPredicted RBP10.2□□□□□ -0.78
CCDC40-203ENST00000374877 OR52B4Q8NGK2 314 aa10.2□□□□□ -0.78
CCDC40-203ENST00000374877 SGTBQ96EQ0 304 aa10.2□□□□□ -0.78
CCDC40-203ENST00000374877 ZNF578Q96N58 590 aaPredicted RBP10.2□□□□□ -0.78
CCDC40-203ENST00000374877 TNFRSF13CQ96RJ3 184 aa10.2□□□□□ -0.78
CCDC40-203ENST00000374877 ARL6Q9H0F7 186 aa10.2□□□□□ -0.78
CCDC40-203ENST00000374877 CAPN10Q9HC96 672 aa10.2□□□□□ -0.78
CCDC40-203ENST00000374877 FBXO34Q9NWN3 711 aa10.2□□□□□ -0.78
CCDC40-203ENST00000374877 FXYD6-FXYD2A0A087WZ82 144 aa10.19□□□□□ -0.78
CCDC40-203ENST00000374877 TBC1D3EA0A087X179 549 aa10.19□□□□□ -0.78
CCDC40-203ENST00000374877 TBC1D3KA0A087X1G2 549 aa10.19□□□□□ -0.78
CCDC40-203ENST00000374877 TBC1D3FA6NER0 549 aaPredicted RBP10.19□□□□□ -0.78
CCDC40-203ENST00000374877 MCRIP1C9JLW8 97 aa10.19□□□□□ -0.78
CCDC40-203ENST00000374877 GABARAPH6UMI1 98 aa10.19□□□□□ -0.78
CCDC40-203ENST00000374877 TOR1AO14656 332 aa10.19□□□□□ -0.78
CCDC40-203ENST00000374877 FMO6PO60774 539 aa10.19□□□□□ -0.78
CCDC40-203ENST00000374877 RP2O75695 350 aa10.19□□□□□ -0.78
CCDC40-203ENST00000374877 SIX6O95475 246 aa10.19□□□□□ -0.78
CCDC40-203ENST00000374877 IFNGR1P15260 489 aa10.19□□□□□ -0.78
CCDC40-203ENST00000374877 RAP2BP61225 183 aa10.19□□□□□ -0.78
CCDC40-203ENST00000374877 DUSP8Q13202 625 aa10.19□□□□□ -0.78
CCDC40-203ENST00000374877 TBC1D3GQ6DHY5 549 aa10.19□□□□□ -0.78
CCDC40-203ENST00000374877 RGS7BPQ6MZT1 257 aaPredicted RBP10.19□□□□□ -0.78
CCDC40-203ENST00000374877 FAM199XQ6PEV8 388 aaPredicted RBP10.19□□□□□ -0.78
CCDC40-203ENST00000374877 FIGNL1Q6PIW4 674 aa10.19□□□□□ -0.78
CCDC40-203ENST00000374877 SEZ6L2Q6UXD5 910 aa10.19□□□□□ -0.78
CCDC40-203ENST00000374877 OVCH1Q7RTY7 1134 aa10.19□□□□□ -0.78
CCDC40-203ENST00000374877 FXYD6Q9H0Q3 95 aa10.19□□□□□ -0.78
CCDC40-203ENST00000374877 GPN1Q9HCN4 374 aaPredicted RBP10.19□□□□□ -0.78
CCDC40-203ENST00000374877 PCDHGA5Q9Y5G8 931 aa10.19□□□□□ -0.78
CCDC40-203ENST00000374877 TRPM6Q9BX84 2022 aa10.19□□□□□ -0.78
CCDC40-203ENST00000374877 TRIOBPQ9H2D6 2365 aa10.19□□□□□ -0.78
CCDC40-203ENST00000374877 SLC22A23A1A5C7 686 aa10.19□□□□□ -0.78
CCDC40-203ENST00000374877 NAP1L6A6NFF2 107 aa10.19□□□□□ -0.78
CCDC40-203ENST00000374877 ZNF879B4DU55 563 aa10.19□□□□□ -0.78
CCDC40-203ENST00000374877 PCDH8O95206 1070 aa10.19□□□□□ -0.78
CCDC40-203ENST00000374877 IFNGP01579 166 aa10.19□□□□□ -0.78
CCDC40-203ENST00000374877 SRMP19623 302 aa10.19□□□□□ -0.78
CCDC40-203ENST00000374877 RPS11P62280 158 aaKnown RBP eCLIP10.19□□□□□ -0.78
CCDC40-203ENST00000374877 TCEA2Q15560 299 aa10.19□□□□□ -0.78
CCDC40-203ENST00000374877 ARHGAP11BQ3KRB8 267 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms