RNA–Protein interactions for RNA: ENST00000374223.5

UBXN11-207, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best) BASIC

Gene UBXN11, Length 1,312 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-207ENST00000374223 IDUAP35475 653 aa12.49□□□□□ -0.41
UBXN11-207ENST00000374223 CLK1P49759 484 aaKnown RBP12.49□□□□□ -0.41
UBXN11-207ENST00000374223 SELENOPP49908 381 aa12.49□□□□□ -0.41
UBXN11-207ENST00000374223 SLC18A1P54219 525 aa12.49□□□□□ -0.41
UBXN11-207ENST00000374223 TUBA1BP68363 451 aa12.49□□□□□ -0.41
UBXN11-207ENST00000374223 TUBA4AP68366 448 aa12.49□□□□□ -0.41
UBXN11-207ENST00000374223 DMTNQ08495 405 aa12.49□□□□□ -0.41
UBXN11-207ENST00000374223 RGNQ15493 299 aa12.49□□□□□ -0.41
UBXN11-207ENST00000374223 ETFDHQ16134 617 aa12.49□□□□□ -0.41
UBXN11-207ENST00000374223 TTMPQ5BVD1 217 aa12.49□□□□□ -0.41
UBXN11-207ENST00000374223 TUBA1AQ71U36 451 aa12.49□□□□□ -0.41
UBXN11-207ENST00000374223 DTX2Q86UW9 622 aa12.49□□□□□ -0.41
UBXN11-207ENST00000374223 DDIT4LQ96D03 193 aa12.49□□□□□ -0.41
UBXN11-207ENST00000374223 MUCL1Q96DR8 90 aa12.49□□□□□ -0.41
UBXN11-207ENST00000374223 ZHX1-C8orf76Q96EF9 292 aa12.49□□□□□ -0.41
UBXN11-207ENST00000374223 THOC1Q96FV9 657 aaKnown RBP12.49□□□□□ -0.41
UBXN11-207ENST00000374223 ITCHQ96J02 903 aa12.49□□□□□ -0.41
UBXN11-207ENST00000374223 PTDSS2Q9BVG9 487 aa12.49□□□□□ -0.41
UBXN11-207ENST00000374223 AMBRA1Q9C0C7 1298 aa12.49□□□□□ -0.41
UBXN11-207ENST00000374223 SEC61A2Q9H9S3 476 aa12.49□□□□□ -0.41
UBXN11-207ENST00000374223 NGBQ9NPG2 151 aa12.49□□□□□ -0.41
UBXN11-207ENST00000374223 SLC17A5Q9NRA2 495 aa12.49□□□□□ -0.41
UBXN11-207ENST00000374223 NKIRAS1Q9NYS0 192 aa12.49□□□□□ -0.41
UBXN11-207ENST00000374223 TAS2R16Q9NYV7 291 aa12.49□□□□□ -0.41
UBXN11-207ENST00000374223 MALRD1Q5VYJ5 2156 aa12.49□□□□□ -0.41
UBXN11-207ENST00000374223 COL6A5A8TX70 2615 aa12.49□□□□□ -0.41
UBXN11-207ENST00000374223 IGHV4-30-2A0A087WSY4 118 aa12.48□□□□□ -0.41
UBXN11-207ENST00000374223 A0A096LNT2 108 aa12.48□□□□□ -0.41
UBXN11-207ENST00000374223 FAM234BA2RU67 622 aa12.48□□□□□ -0.41
UBXN11-207ENST00000374223 FTCDNL1E5RQL4 147 aa12.48□□□□□ -0.41
UBXN11-207ENST00000374223 CLIC1O00299 241 aa12.48□□□□□ -0.41
UBXN11-207ENST00000374223 DNPH1O43598 174 aa12.48□□□□□ -0.41
UBXN11-207ENST00000374223 SSX4O60224 188 aa12.48□□□□□ -0.41
UBXN11-207ENST00000374223 NPIPB7O75200 414 aa12.48□□□□□ -0.41
UBXN11-207ENST00000374223 CBLP22681 906 aa12.48□□□□□ -0.41
UBXN11-207ENST00000374223 CXCR1P25024 350 aa12.48□□□□□ -0.41
UBXN11-207ENST00000374223 HTR2AP28223 471 aa12.48□□□□□ -0.41
UBXN11-207ENST00000374223 HTR3AP46098 478 aa12.48□□□□□ -0.41
UBXN11-207ENST00000374223 GSTA3Q16772 222 aa12.48□□□□□ -0.41
UBXN11-207ENST00000374223 LIN52Q52LA3 116 aa12.48□□□□□ -0.41
UBXN11-207ENST00000374223 SLC22A25Q6T423 547 aa12.48□□□□□ -0.41
UBXN11-207ENST00000374223 PAQR6Q6TCH4 344 aa12.48□□□□□ -0.41
UBXN11-207ENST00000374223 GPAT4Q86UL3 456 aa12.48□□□□□ -0.41
UBXN11-207ENST00000374223 EPHX4Q8IUS5 362 aa12.48□□□□□ -0.41
UBXN11-207ENST00000374223 MIER2Q8N344 545 aa12.48□□□□□ -0.41
UBXN11-207ENST00000374223 KTI12Q96EK9 354 aaPredicted RBP12.48□□□□□ -0.41
UBXN11-207ENST00000374223 CACNG6Q9BXT2 260 aa12.48□□□□□ -0.41
UBXN11-207ENST00000374223 AQP7P3A6NL99 342 aa12.47□□□□□ -0.41
UBXN11-207ENST00000374223 ATP6V1G2-DDX39BF2Z307 99 aa12.47□□□□□ -0.41
UBXN11-207ENST00000374223 SLCO1B7G3V0H7 640 aa12.47□□□□□ -0.41
UBXN11-207ENST00000374223 GPR171O14626 319 aa12.47□□□□□ -0.41
UBXN11-207ENST00000374223 TPST2O60704 377 aa12.47□□□□□ -0.41
UBXN11-207ENST00000374223 UPK3AO75631 287 aa12.47□□□□□ -0.41
UBXN11-207ENST00000374223 LGI1O95970 557 aa12.47□□□□□ -0.41
UBXN11-207ENST00000374223 TTKP33981 857 aa12.47□□□□□ -0.41
UBXN11-207ENST00000374223 RPS5P46782 204 aaKnown RBP12.47□□□□□ -0.41
UBXN11-207ENST00000374223 CRISP3P54108 245 aa12.47□□□□□ -0.41
UBXN11-207ENST00000374223 RNF220Q5VTB9 566 aa12.47□□□□□ -0.41
UBXN11-207ENST00000374223 C1orf140Q5VVS0 124 aa12.47□□□□□ -0.41
UBXN11-207ENST00000374223 WBP2NLQ6ICG8 309 aa12.47□□□□□ -0.41
UBXN11-207ENST00000374223 CREB3L2Q70SY1 520 aa12.47□□□□□ -0.41
UBXN11-207ENST00000374223 AAED1Q7RTV5 226 aa12.47□□□□□ -0.41
UBXN11-207ENST00000374223 CROCCP2Q86T23 111 aa12.47□□□□□ -0.41
UBXN11-207ENST00000374223 MYPOPQ86VE0 399 aaPredicted RBP12.47□□□□□ -0.41
UBXN11-207ENST00000374223 KIRREL3Q8IZU9 778 aa12.47□□□□□ -0.41
UBXN11-207ENST00000374223 NFKBIDQ8NI38 313 aa12.47□□□□□ -0.41
UBXN11-207ENST00000374223 NANOS1Q8WY41 292 aaKnown RBP12.47□□□□□ -0.41
UBXN11-207ENST00000374223 PMM1Q92871 262 aa12.47□□□□□ -0.41
UBXN11-207ENST00000374223 SLC25A36Q96CQ1 311 aa12.47□□□□□ -0.41
UBXN11-207ENST00000374223 ZNF837Q96EG3 531 aaPredicted RBP12.47□□□□□ -0.41
UBXN11-207ENST00000374223 NAA11Q9BSU3 229 aaPredicted RBP12.47□□□□□ -0.41
UBXN11-207ENST00000374223 SPATA9Q9BWV2 254 aa12.47□□□□□ -0.41
UBXN11-207ENST00000374223 NELFAQ9H3P2 528 aa12.47□□□□□ -0.41
UBXN11-207ENST00000374223 VAPAQ9P0L0 249 aa12.47□□□□□ -0.41
UBXN11-207ENST00000374223 UPB1Q9UBR1 384 aa12.47□□□□□ -0.41
UBXN11-207ENST00000374223 SLC9A8Q9Y2E8 581 aa12.47□□□□□ -0.41
UBXN11-207ENST00000374223 ATRQ13535 2644 aa12.47□□□□□ -0.41
UBXN11-207ENST00000374223 IGKV1D-42A0A075B6H8 117 aa12.46□□□□□ -0.41
UBXN11-207ENST00000374223 TRBV5-3A0A0A0MS03 114 aa12.46□□□□□ -0.41
UBXN11-207ENST00000374223 A0A0G2JPF8 293 aa12.46□□□□□ -0.41
UBXN11-207ENST00000374223 ZNF503-AS2A6NEH8 195 aa12.46□□□□□ -0.41
UBXN11-207ENST00000374223 HNRNPCL2B2RXH8 293 aa12.46□□□□□ -0.41
UBXN11-207ENST00000374223 HNRNPCL3B7ZW38 293 aa12.46□□□□□ -0.41
UBXN11-207ENST00000374223 HNRNPCL1O60812 293 aaKnown RBP12.46□□□□□ -0.41
UBXN11-207ENST00000374223 HNRNPCL4P0DMR1 293 aa12.46□□□□□ -0.41
UBXN11-207ENST00000374223 ZNF311Q5JNZ3 666 aa12.46□□□□□ -0.41
UBXN11-207ENST00000374223 PHYHD1Q5SRE7 291 aa12.46□□□□□ -0.41
UBXN11-207ENST00000374223 AGBL2Q5U5Z8 902 aa12.46□□□□□ -0.41
UBXN11-207ENST00000374223 PODNL1Q6PEZ8 512 aa12.46□□□□□ -0.41
UBXN11-207ENST00000374223 P2RY8Q86VZ1 359 aa12.46□□□□□ -0.41
UBXN11-207ENST00000374223 TMEM45BQ96B21 275 aa12.46□□□□□ -0.41
UBXN11-207ENST00000374223 TRMT61AQ96FX7 289 aaKnown RBP12.46□□□□□ -0.41
UBXN11-207ENST00000374223 ALKBH3Q96Q83 286 aaPredicted RBP12.46□□□□□ -0.41
UBXN11-207ENST00000374223 DHRS9Q9BPW9 319 aa12.46□□□□□ -0.41
UBXN11-207ENST00000374223 A4GALTQ9NPC4 353 aa12.46□□□□□ -0.41
UBXN11-207ENST00000374223 CCDC167Q9P0B6 97 aa12.46□□□□□ -0.41
UBXN11-207ENST00000374223 MOKQ9UQ07 419 aa12.46□□□□□ -0.41
UBXN11-207ENST00000374223 ATP23Q9Y6H3 246 aa12.46□□□□□ -0.41
UBXN11-207ENST00000374223 A0A096LPE4 126 aa12.45□□□□□ -0.42
UBXN11-207ENST00000374223 A0A096LPI6 279 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms