RNA–Protein interactions for RNA: ENST00000374038.7

RBM39-204, Transcript of RNA binding motif protein 39, human

TSL 5

Gene RBM39, Length 1,026 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-204	ENST00000374038	SSC4D	Q8WTU2	575 aa		14	□□□□□ -0.17
RBM39-204	ENST00000374038	ABHD3	Q8WU67	409 aa		14	□□□□□ -0.17
RBM39-204	ENST00000374038	TMEM239	Q8WW34	195 aa		14	□□□□□ -0.17
RBM39-204	ENST00000374038	ITLN2	Q8WWU7	325 aa	Predicted RBP	14	□□□□□ -0.17
RBM39-204	ENST00000374038	UTP4	Q969X6	686 aa	Known RBP	14	□□□□□ -0.17
RBM39-204	ENST00000374038	SDCCAG3	Q96C92	435 aa		14	□□□□□ -0.17
RBM39-204	ENST00000374038	INTS12	Q96CB8	462 aa	Known RBP	14	□□□□□ -0.17
RBM39-204	ENST00000374038	PIP5K1A	Q99755	562 aa		14	□□□□□ -0.17
RBM39-204	ENST00000374038	SLC19A3	Q9BZV2	496 aa		14	□□□□□ -0.17
RBM39-204	ENST00000374038	NMNAT1	Q9HAN9	279 aa	Predicted RBP	14	□□□□□ -0.17
RBM39-204	ENST00000374038	TENM4	Q6N022	2769 aa		14	□□□□□ -0.17
RBM39-204	ENST00000374038	TCRBV3S1	A0A5B6	114 aa		13.99	□□□□□ -0.17
RBM39-204	ENST00000374038	DHRS12	A0PJE2	317 aa		13.99	□□□□□ -0.17
RBM39-204	ENST00000374038	WIPF3	A6NGB9	483 aa		13.99	□□□□□ -0.17
RBM39-204	ENST00000374038	ZNF814	B7Z6K7	855 aa		13.99	□□□□□ -0.17
RBM39-204	ENST00000374038	CYTIP	O60759	359 aa		13.99	□□□□□ -0.17
RBM39-204	ENST00000374038	FZD7	O75084	574 aa		13.99	□□□□□ -0.17
RBM39-204	ENST00000374038	CIB2	O75838	187 aa		13.99	□□□□□ -0.17
RBM39-204	ENST00000374038	AKR7A3	O95154	331 aa		13.99	□□□□□ -0.17
RBM39-204	ENST00000374038	MT-ND1	P03886	318 aa		13.99	□□□□□ -0.17
RBM39-204	ENST00000374038	H1F0	P07305	194 aa	Known RBP	13.99	□□□□□ -0.17
RBM39-204	ENST00000374038	UMPS	P11172	480 aa		13.99	□□□□□ -0.17
RBM39-204	ENST00000374038	CTSS	P25774	331 aa		13.99	□□□□□ -0.17
RBM39-204	ENST00000374038	GTF2E2	P29084	291 aa	Known RBP	13.99	□□□□□ -0.17
RBM39-204	ENST00000374038	CHRNB4	P30926	498 aa		13.99	□□□□□ -0.17
RBM39-204	ENST00000374038	MAGEA2	P43356	314 aa		13.99	□□□□□ -0.17
RBM39-204	ENST00000374038	H3F3A	P84243	136 aa		13.99	□□□□□ -0.17
RBM39-204	ENST00000374038	FOXF2	Q12947	444 aa		13.99	□□□□□ -0.17
RBM39-204	ENST00000374038	RNPS1	Q15287	305 aa	Known RBP	13.99	□□□□□ -0.17
RBM39-204	ENST00000374038	GTF2IRD2B	Q6EKJ0	949 aa		13.99	□□□□□ -0.17
RBM39-204	ENST00000374038	ABLIM2	Q6H8Q1	611 aa		13.99	□□□□□ -0.17
RBM39-204	ENST00000374038	PIWIL3	Q7Z3Z3	882 aa	Known RBP	13.99	□□□□□ -0.17
RBM39-204	ENST00000374038	MRGPRG	Q86SM5	289 aa		13.99	□□□□□ -0.17
RBM39-204	ENST00000374038	GTF2IRD2	Q86UP8	949 aa		13.99	□□□□□ -0.17
RBM39-204	ENST00000374038	MCEMP1	Q8IX19	187 aa		13.99	□□□□□ -0.17
RBM39-204	ENST00000374038	ZNF808	Q8N4W9	903 aa	Predicted RBP	13.99	□□□□□ -0.17
RBM39-204	ENST00000374038	OR6S1	Q8NH40	331 aa		13.99	□□□□□ -0.17
RBM39-204	ENST00000374038	CANT1	Q8WVQ1	401 aa		13.99	□□□□□ -0.17
RBM39-204	ENST00000374038	SLC25A36	Q96CQ1	311 aa		13.99	□□□□□ -0.17
RBM39-204	ENST00000374038	DHRS1	Q96LJ7	313 aa		13.99	□□□□□ -0.17
RBM39-204	ENST00000374038	HS6ST2	Q96MM7	605 aa		13.99	□□□□□ -0.17
RBM39-204	ENST00000374038	ZNF347	Q96SE7	839 aa		13.99	□□□□□ -0.17
RBM39-204	ENST00000374038	NAA11	Q9BSU3	229 aa	Predicted RBP	13.99	□□□□□ -0.17
RBM39-204	ENST00000374038	ANKRD19P	Q9H560	264 aa		13.99	□□□□□ -0.17
RBM39-204	ENST00000374038	MEPE	Q9NQ76	525 aa	Predicted RBP	13.99	□□□□□ -0.17
RBM39-204	ENST00000374038	KLHL9	Q9P2J3	617 aa		13.99	□□□□□ -0.17
RBM39-204	ENST00000374038	CLEC4A	Q9UMR7	237 aa		13.99	□□□□□ -0.17
RBM39-204	ENST00000374038	AURKC	Q9UQB9	309 aa		13.99	□□□□□ -0.17
RBM39-204	ENST00000374038	TESMIN	Q9Y4I5	508 aa		13.99	□□□□□ -0.17
RBM39-204	ENST00000374038	USP9X	Q93008	2570 aa	Predicted RBP	13.99	□□□□□ -0.17
RBM39-204	ENST00000374038	GCN1	Q92616	2671 aa	Known RBP	13.98	□□□□□ -0.17
RBM39-204	ENST00000374038	INTS1	Q8N201	2190 aa	Known RBP	13.98	□□□□□ -0.17
RBM39-204	ENST00000374038		A0A1W2PNV4	684 aa		13.98	□□□□□ -0.17
RBM39-204	ENST00000374038		A0A1W2PRQ8	180 aa		13.98	□□□□□ -0.17
RBM39-204	ENST00000374038	ENO4	A6NNW6	628 aa		13.98	□□□□□ -0.17
RBM39-204	ENST00000374038	LRRN3	E7EW58	273 aa		13.98	□□□□□ -0.17
RBM39-204	ENST00000374038	RAMP1	O60894	148 aa		13.98	□□□□□ -0.17
RBM39-204	ENST00000374038	SS18L1	O75177	396 aa	Predicted RBP	13.98	□□□□□ -0.17
RBM39-204	ENST00000374038	PLG	P00747	810 aa	Predicted RBP	13.98	□□□□□ -0.17
RBM39-204	ENST00000374038	BGLAP	P02818	100 aa		13.98	□□□□□ -0.17
RBM39-204	ENST00000374038	CRH	P06850	196 aa		13.98	□□□□□ -0.17
RBM39-204	ENST00000374038	RAP2A	P10114	183 aa		13.98	□□□□□ -0.17
RBM39-204	ENST00000374038	AGA	P20933	346 aa		13.98	□□□□□ -0.17
RBM39-204	ENST00000374038	CBL	P22681	906 aa		13.98	□□□□□ -0.17
RBM39-204	ENST00000374038	ERF	P50548	548 aa		13.98	□□□□□ -0.17
RBM39-204	ENST00000374038	SPIB	Q01892	262 aa		13.98	□□□□□ -0.17
RBM39-204	ENST00000374038	LTB	Q06643	244 aa		13.98	□□□□□ -0.17
RBM39-204	ENST00000374038	RASGEF1B	Q0VAM2	473 aa		13.98	□□□□□ -0.17
RBM39-204	ENST00000374038	DGCR6	Q14129	220 aa		13.98	□□□□□ -0.17
RBM39-204	ENST00000374038	MFSD13A	Q14CX5	517 aa		13.98	□□□□□ -0.17
RBM39-204	ENST00000374038	GUSBP1	Q15486	140 aa		13.98	□□□□□ -0.17
RBM39-204	ENST00000374038	ZSCAN26	Q16670	478 aa		13.98	□□□□□ -0.17
RBM39-204	ENST00000374038	FGD3	Q5JSP0	725 aa		13.98	□□□□□ -0.17
RBM39-204	ENST00000374038	OTUD3	Q5T2D3	398 aa	Predicted RBP	13.98	□□□□□ -0.17
RBM39-204	ENST00000374038	XKRX	Q6PP77	449 aa		13.98	□□□□□ -0.17
RBM39-204	ENST00000374038	CCDC103	Q8IW40	242 aa		13.98	□□□□□ -0.17
RBM39-204	ENST00000374038	C10orf53	Q8N6V4	93 aa		13.98	□□□□□ -0.17
RBM39-204	ENST00000374038	TMEM99	Q8N816	258 aa		13.98	□□□□□ -0.17
RBM39-204	ENST00000374038	PFN4	Q8NHR9	129 aa		13.98	□□□□□ -0.17
RBM39-204	ENST00000374038	PIGX	Q8TBF5	258 aa		13.98	□□□□□ -0.17
RBM39-204	ENST00000374038	ASB5	Q8WWX0	329 aa		13.98	□□□□□ -0.17
RBM39-204	ENST00000374038	ACOT11	Q8WXI4	607 aa	Predicted RBP	13.98	□□□□□ -0.17
RBM39-204	ENST00000374038	GMPPA	Q96IJ6	420 aa	Predicted RBP	13.98	□□□□□ -0.17
RBM39-204	ENST00000374038	MOGAT1	Q96PD6	335 aa		13.98	□□□□□ -0.17
RBM39-204	ENST00000374038	SFXN3	Q9BWM7	321 aa		13.98	□□□□□ -0.17
RBM39-204	ENST00000374038	KLHL4	Q9C0H6	718 aa		13.98	□□□□□ -0.17
RBM39-204	ENST00000374038	GLRX2	Q9NS18	164 aa		13.98	□□□□□ -0.17
RBM39-204	ENST00000374038	C6orf203	Q9P0P8	240 aa	Predicted RBP	13.98	□□□□□ -0.17
RBM39-204	ENST00000374038	ZNF629	Q9UEG4	869 aa	Predicted RBP	13.98	□□□□□ -0.17
RBM39-204	ENST00000374038	MED31	Q9Y3C7	131 aa		13.98	□□□□□ -0.17
RBM39-204	ENST00000374038	AQP7P3	A6NL99	342 aa		13.97	□□□□□ -0.17
RBM39-204	ENST00000374038		M0R082	166 aa		13.97	□□□□□ -0.17
RBM39-204	ENST00000374038	PIP5K1C	O60331	668 aa		13.97	□□□□□ -0.17
RBM39-204	ENST00000374038	TNFSF13	O75888	250 aa		13.97	□□□□□ -0.17
RBM39-204	ENST00000374038	IL18BP	O95998	194 aa		13.97	□□□□□ -0.17
RBM39-204	ENST00000374038	MT-ATP6	P00846	226 aa		13.97	□□□□□ -0.17
RBM39-204	ENST00000374038	IGF2	P01344	180 aa		13.97	□□□□□ -0.17
RBM39-204	ENST00000374038	BMP5	P22003	454 aa		13.97	□□□□□ -0.17
RBM39-204	ENST00000374038	GRPR	P30550	384 aa		13.97	□□□□□ -0.17
RBM39-204	ENST00000374038	RRM2	P31350	389 aa		13.97	□□□□□ -0.17

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