RNA–Protein interactions for RNA: ENST00000373492.6

PBX3-205, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-205ENST00000373492 MFSD8Q8NHS3 518 aa16.38■□□□□ 0.21
PBX3-205ENST00000373492 GMPPAQ96IJ6 420 aaPredicted RBP16.38■□□□□ 0.21
PBX3-205ENST00000373492 FNDC11Q9BVV2 318 aa16.38■□□□□ 0.21
PBX3-205ENST00000373492 TRIM15Q9C019 465 aa16.38■□□□□ 0.21
PBX3-205ENST00000373492 KLHL9Q9P2J3 617 aa16.38■□□□□ 0.21
PBX3-205ENST00000373492 FAM32AQ9Y421 112 aaKnown RBP16.38■□□□□ 0.21
PBX3-205ENST00000373492 ADGRG4Q8IZF6 3080 aa16.37■□□□□ 0.21
PBX3-205ENST00000373492 TRAV36DV7A0A075B6V5 113 aa16.37■□□□□ 0.21
PBX3-205ENST00000373492 IGHV3-15A0A0B4J1V0 119 aa16.37■□□□□ 0.21
PBX3-205ENST00000373492 LIPT2A6NK58 231 aa16.37■□□□□ 0.21
PBX3-205ENST00000373492 SMAD9O15198 467 aaKnown RBP16.37■□□□□ 0.21
PBX3-205ENST00000373492 GSC2O15499 205 aa16.37■□□□□ 0.21
PBX3-205ENST00000373492 ITGA2P17301 1181 aa16.37■□□□□ 0.21
PBX3-205ENST00000373492 ATP6V1B2P21281 511 aa16.37■□□□□ 0.21
PBX3-205ENST00000373492 BMP5P22003 454 aa16.37■□□□□ 0.21
PBX3-205ENST00000373492 YAP1P46937 504 aaKnown RBP16.37■□□□□ 0.21
PBX3-205ENST00000373492 AGFG1P52594 562 aaKnown RBP16.37■□□□□ 0.21
PBX3-205ENST00000373492 FAM69AQ5T7M9 428 aa16.37■□□□□ 0.21
PBX3-205ENST00000373492 LINC00114Q6XXX2 140 aa16.37■□□□□ 0.21
PBX3-205ENST00000373492 TSPYL5Q86VY4 417 aaPredicted RBP16.37■□□□□ 0.21
PBX3-205ENST00000373492 CNEP1R1Q8N9A8 125 aa16.37■□□□□ 0.21
PBX3-205ENST00000373492 PIGXQ8TBF5 258 aa16.37■□□□□ 0.21
PBX3-205ENST00000373492 SLC25A36Q96CQ1 311 aa16.37■□□□□ 0.21
PBX3-205ENST00000373492 KTI12Q96EK9 354 aaPredicted RBP16.37■□□□□ 0.21
PBX3-205ENST00000373492 TACO1Q9BSH4 297 aaKnown RBP16.37■□□□□ 0.21
PBX3-205ENST00000373492 MMADHCQ9H3L0 296 aaPredicted RBP16.37■□□□□ 0.21
PBX3-205ENST00000373492 GP6Q9HCN6 339 aa16.37■□□□□ 0.21
PBX3-205ENST00000373492 NPDC1Q9NQX5 325 aaPredicted RBP16.37■□□□□ 0.21
PBX3-205ENST00000373492 A4GNTQ9UNA3 340 aa16.37■□□□□ 0.21
PBX3-205ENST00000373492 EMC9Q9Y3B6 208 aa16.37■□□□□ 0.21
PBX3-205ENST00000373492 PKDREJQ9NTG1 2253 aa16.36■□□□□ 0.21
PBX3-205ENST00000373492 CRYBG3Q68DQ2 2970 aa16.36■□□□□ 0.21
PBX3-205ENST00000373492 NOTCH2Q04721 2471 aa16.36■□□□□ 0.21
PBX3-205ENST00000373492 A0A1W2PNV4 684 aa16.36■□□□□ 0.21
PBX3-205ENST00000373492 CYTIPO60759 359 aa16.36■□□□□ 0.21
PBX3-205ENST00000373492 THY1P04216 161 aa16.36■□□□□ 0.21
PBX3-205ENST00000373492 IGFBP2P18065 325 aa16.36■□□□□ 0.21
PBX3-205ENST00000373492 MS4A2Q01362 244 aa16.36■□□□□ 0.21
PBX3-205ENST00000373492 RASGEF1BQ0VAM2 473 aa16.36■□□□□ 0.21
PBX3-205ENST00000373492 FOXF2Q12947 444 aa16.36■□□□□ 0.21
PBX3-205ENST00000373492 MFSD13AQ14CX5 517 aa16.36■□□□□ 0.21
PBX3-205ENST00000373492 PGM2L1Q6PCE3 622 aa16.36■□□□□ 0.21
PBX3-205ENST00000373492 PAQR6Q6TCH4 344 aa16.36■□□□□ 0.21
PBX3-205ENST00000373492 FAM214BQ7L5A3 538 aa16.36■□□□□ 0.21
PBX3-205ENST00000373492 OFCC1Q8IZS5 231 aa16.36■□□□□ 0.21
PBX3-205ENST00000373492 FAM86B1Q8N7N1 296 aa16.36■□□□□ 0.21
PBX3-205ENST00000373492 RELL2Q8NC24 303 aaPredicted RBP16.36■□□□□ 0.21
PBX3-205ENST00000373492 ABHD3Q8WU67 409 aa16.36■□□□□ 0.21
PBX3-205ENST00000373492 LRRC46Q96FV0 321 aa16.36■□□□□ 0.21
PBX3-205ENST00000373492 HS6ST2Q96MM7 605 aa16.36■□□□□ 0.21
PBX3-205ENST00000373492 CADM1Q9BY67 442 aaKnown RBP16.36■□□□□ 0.21
PBX3-205ENST00000373492 SLC19A3Q9BZV2 496 aa16.36■□□□□ 0.21
PBX3-205ENST00000373492 PIGMQ9H3S5 423 aa16.36■□□□□ 0.21
PBX3-205ENST00000373492 C6orf203Q9P0P8 240 aaPredicted RBP16.36■□□□□ 0.21
PBX3-205ENST00000373492 ENPP4Q9Y6X5 453 aa16.36■□□□□ 0.21
PBX3-205ENST00000373492 NAV2Q8IVL1 2488 aa16.36■□□□□ 0.21
PBX3-205ENST00000373492 CELSR2Q9HCU4 2923 aa16.35■□□□□ 0.21
PBX3-205ENST00000373492 IGKV1D-42A0A075B6H8 117 aa16.35■□□□□ 0.21
PBX3-205ENST00000373492 J3KTA2 159 aa16.35■□□□□ 0.21
PBX3-205ENST00000373492 hCG_2039718K7EN88 272 aa16.35■□□□□ 0.21
PBX3-205ENST00000373492 SS18L1O75177 396 aaPredicted RBP16.35■□□□□ 0.21
PBX3-205ENST00000373492 LYPD3O95274 346 aa16.35■□□□□ 0.21
PBX3-205ENST00000373492 FABP3P05413 133 aa16.35■□□□□ 0.21
PBX3-205ENST00000373492 RHCEP18577 417 aa16.35■□□□□ 0.21
PBX3-205ENST00000373492 PTNP21246 168 aa16.35■□□□□ 0.21
PBX3-205ENST00000373492 RBM34P42696 430 aaKnown RBP16.35■□□□□ 0.21
PBX3-205ENST00000373492 ASCL1P50553 236 aa16.35■□□□□ 0.21
PBX3-205ENST00000373492 SIRPAP78324 504 aa16.35■□□□□ 0.21
PBX3-205ENST00000373492 FOXD4Q12950 439 aaPredicted RBP16.35■□□□□ 0.21
PBX3-205ENST00000373492 TRAM2Q15035 370 aa16.35■□□□□ 0.21
PBX3-205ENST00000373492 FBXL19-AS1Q494R0 122 aa16.35■□□□□ 0.21
PBX3-205ENST00000373492 TMEM201Q5SNT2 666 aa16.35■□□□□ 0.21
PBX3-205ENST00000373492 OTUD3Q5T2D3 398 aaPredicted RBP16.35■□□□□ 0.21
PBX3-205ENST00000373492 ABLIM2Q6H8Q1 611 aa16.35■□□□□ 0.21
PBX3-205ENST00000373492 WDR88Q6ZMY6 472 aa16.35■□□□□ 0.21
PBX3-205ENST00000373492 MEX3BQ6ZN04 569 aaKnown RBP16.35■□□□□ 0.21
PBX3-205ENST00000373492 P3H2Q8IVL5 708 aa16.35■□□□□ 0.21
PBX3-205ENST00000373492 NKAIN4Q8IVV8 208 aa16.35■□□□□ 0.21
PBX3-205ENST00000373492 OR6S1Q8NH40 331 aa16.35■□□□□ 0.21
PBX3-205ENST00000373492 TAAR8Q969N4 342 aa16.35■□□□□ 0.21
PBX3-205ENST00000373492 ZNF300Q96RE9 604 aaPredicted RBP16.35■□□□□ 0.21
PBX3-205ENST00000373492 SEPHS2Q99611 448 aa16.35■□□□□ 0.21
PBX3-205ENST00000373492 PRSS27Q9BQR3 290 aa16.35■□□□□ 0.21
PBX3-205ENST00000373492 PTDSS2Q9BVG9 487 aa16.35■□□□□ 0.21
PBX3-205ENST00000373492 KLHL4Q9C0H6 718 aa16.35■□□□□ 0.21
PBX3-205ENST00000373492 LRMDAQ9H2I8 198 aa16.35■□□□□ 0.21
PBX3-205ENST00000373492 SLC24A3Q9HC58 644 aa16.35■□□□□ 0.21
PBX3-205ENST00000373492 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.35■□□□□ 0.21
PBX3-205ENST00000373492 FOXD3Q9UJU5 478 aaPredicted RBP16.35■□□□□ 0.21
PBX3-205ENST00000373492 CLEC4AQ9UMR7 237 aa16.35■□□□□ 0.21
PBX3-205ENST00000373492 MAST4O15021 2626 aa16.34■□□□□ 0.21
PBX3-205ENST00000373492 ACOT8O14734 319 aa16.34■□□□□ 0.21
PBX3-205ENST00000373492 TNFSF13O75888 250 aa16.34■□□□□ 0.21
PBX3-205ENST00000373492 AKR7A3O95154 331 aa16.34■□□□□ 0.21
PBX3-205ENST00000373492 SEMG1P04279 462 aa16.34■□□□□ 0.21
PBX3-205ENST00000373492 PEX19P40855 299 aa16.34■□□□□ 0.21
PBX3-205ENST00000373492 H3F3AP84243 136 aa16.34■□□□□ 0.21
PBX3-205ENST00000373492 VLDLRP98155 873 aa16.34■□□□□ 0.21
PBX3-205ENST00000373492 PDK3Q15120 406 aa16.34■□□□□ 0.21
PBX3-205ENST00000373492 TMEM225Q6GV28 225 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms