RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 RFXANKO14593 260 aa11.49□□□□□ -0.57
RPF1-201ENST00000370654 HDAC3O15379 428 aa11.49□□□□□ -0.57
RPF1-201ENST00000370654 TLX2O43763 284 aaPredicted RBP11.49□□□□□ -0.57
RPF1-201ENST00000370654 EIF1BO60739 113 aaKnown RBP11.49□□□□□ -0.57
RPF1-201ENST00000370654 SNUPNO95149 360 aaKnown RBP11.49□□□□□ -0.57
RPF1-201ENST00000370654 LGI1O95970 557 aa11.49□□□□□ -0.57
RPF1-201ENST00000370654 FKBP2P26885 142 aaKnown RBP11.49□□□□□ -0.57
RPF1-201ENST00000370654 MPGP29372 298 aa11.49□□□□□ -0.57
RPF1-201ENST00000370654 SELENOPP49908 381 aa11.49□□□□□ -0.57
RPF1-201ENST00000370654 TUBA1BP68363 451 aa11.49□□□□□ -0.57
RPF1-201ENST00000370654 TUBA4AP68366 448 aa11.49□□□□□ -0.57
RPF1-201ENST00000370654 TMEM249Q2WGJ8 235 aa11.49□□□□□ -0.57
RPF1-201ENST00000370654 C6orf52Q5T4I8 152 aa11.49□□□□□ -0.57
RPF1-201ENST00000370654 HHATQ5VTY9 493 aa11.49□□□□□ -0.57
RPF1-201ENST00000370654 TUBA1AQ71U36 451 aa11.49□□□□□ -0.57
RPF1-201ENST00000370654 SERPINA11Q86U17 422 aa11.49□□□□□ -0.57
RPF1-201ENST00000370654 GPAT4Q86UL3 456 aa11.49□□□□□ -0.57
RPF1-201ENST00000370654 COMTD1Q86VU5 262 aa11.49□□□□□ -0.57
RPF1-201ENST00000370654 EPHX4Q8IUS5 362 aa11.49□□□□□ -0.57
RPF1-201ENST00000370654 KDM8Q8N371 416 aa11.49□□□□□ -0.57
RPF1-201ENST00000370654 TRIML2Q8N7C3 387 aa11.49□□□□□ -0.57
RPF1-201ENST00000370654 SPATA3Q8NHX4 192 aa11.49□□□□□ -0.57
RPF1-201ENST00000370654 PMM1Q92871 262 aa11.49□□□□□ -0.57
RPF1-201ENST00000370654 MAELQ96JY0 434 aaKnown RBP11.49□□□□□ -0.57
RPF1-201ENST00000370654 TNFRSF13CQ96RJ3 184 aa11.49□□□□□ -0.57
RPF1-201ENST00000370654 ADPRHL2Q9NX46 363 aa11.49□□□□□ -0.57
RPF1-201ENST00000370654 ZNF443Q9Y2A4 671 aaPredicted RBP11.49□□□□□ -0.57
RPF1-201ENST00000370654 ARFGEF3Q5TH69 2177 aa11.49□□□□□ -0.57
RPF1-201ENST00000370654 FBN3Q75N90 2809 aa11.48□□□□□ -0.57
RPF1-201ENST00000370654 IGHV1-18A0A0C4DH31 117 aa11.48□□□□□ -0.57
RPF1-201ENST00000370654 ELOA3DA6NLF2 546 aaPredicted RBP11.48□□□□□ -0.57
RPF1-201ENST00000370654 A8MV72 311 aaPredicted RBP11.48□□□□□ -0.57
RPF1-201ENST00000370654 H7C417 338 aa11.48□□□□□ -0.57
RPF1-201ENST00000370654 NPIPB7O75200 414 aa11.48□□□□□ -0.57
RPF1-201ENST00000370654 UPK3AO75631 287 aa11.48□□□□□ -0.57
RPF1-201ENST00000370654 SLC22A3O75751 556 aa11.48□□□□□ -0.57
RPF1-201ENST00000370654 GPIP06744 558 aa11.48□□□□□ -0.57
RPF1-201ENST00000370654 CXCR1P25024 350 aa11.48□□□□□ -0.57
RPF1-201ENST00000370654 CRATP43155 626 aa11.48□□□□□ -0.57
RPF1-201ENST00000370654 RAB35Q15286 201 aa11.48□□□□□ -0.57
RPF1-201ENST00000370654 GSTA3Q16772 222 aa11.48□□□□□ -0.57
RPF1-201ENST00000370654 ELOA3BQ3SY89 546 aa11.48□□□□□ -0.57
RPF1-201ENST00000370654 PDCD4Q53EL6 469 aaKnown RBP11.48□□□□□ -0.57
RPF1-201ENST00000370654 NXNQ6DKJ4 435 aa11.48□□□□□ -0.57
RPF1-201ENST00000370654 ZNF544Q6NX49 715 aa11.48□□□□□ -0.57
RPF1-201ENST00000370654 CLEC2AQ6UVW9 174 aa11.48□□□□□ -0.57
RPF1-201ENST00000370654 SSX8Q7RTT4 187 aa11.48□□□□□ -0.57
RPF1-201ENST00000370654 PHC2Q8IXK0 858 aa11.48□□□□□ -0.57
RPF1-201ENST00000370654 PEX5LQ8IYB4 626 aa11.48□□□□□ -0.57
RPF1-201ENST00000370654 C10orf111Q8N326 155 aa11.48□□□□□ -0.57
RPF1-201ENST00000370654 ARIH2OSQ8N7S6 290 aa11.48□□□□□ -0.57
RPF1-201ENST00000370654 C1orf162Q8NEQ5 155 aaPredicted RBP11.48□□□□□ -0.57
RPF1-201ENST00000370654 ELOA3Q8NG57 546 aa11.48□□□□□ -0.57
RPF1-201ENST00000370654 C10orf105Q8TEF2 133 aa11.48□□□□□ -0.57
RPF1-201ENST00000370654 MAL2Q969L2 176 aa11.48□□□□□ -0.57
RPF1-201ENST00000370654 C3orf49Q96BT1 292 aa11.48□□□□□ -0.57
RPF1-201ENST00000370654 TMEM19Q96HH6 336 aa11.48□□□□□ -0.57
RPF1-201ENST00000370654 PTDSS2Q9BVG9 487 aa11.48□□□□□ -0.57
RPF1-201ENST00000370654 NELFAQ9H3P2 528 aa11.48□□□□□ -0.57
RPF1-201ENST00000370654 TPT1P8Q9HAU6 139 aa11.48□□□□□ -0.57
RPF1-201ENST00000370654 THAP1Q9NVV9 213 aa11.48□□□□□ -0.57
RPF1-201ENST00000370654 PARPBPQ9NWS1 579 aa11.48□□□□□ -0.57
RPF1-201ENST00000370654 AMDHD2Q9Y303 409 aa11.48□□□□□ -0.57
RPF1-201ENST00000370654 SVEP1Q4LDE5 3571 aa11.47□□□□□ -0.57
RPF1-201ENST00000370654 TMEM229AB2RXF0 380 aa11.47□□□□□ -0.57
RPF1-201ENST00000370654 FTCDNL1E5RQL4 147 aa11.47□□□□□ -0.57
RPF1-201ENST00000370654 KRT75O95678 551 aa11.47□□□□□ -0.57
RPF1-201ENST00000370654 HOXB9P17482 250 aaPredicted RBP11.47□□□□□ -0.57
RPF1-201ENST00000370654 APOBEC3AP31941 199 aaPredicted RBP11.47□□□□□ -0.57
RPF1-201ENST00000370654 PRPS1P60891 318 aa11.47□□□□□ -0.57
RPF1-201ENST00000370654 DSTNP60981 165 aa11.47□□□□□ -0.57
RPF1-201ENST00000370654 EGR4Q05215 589 aa11.47□□□□□ -0.57
RPF1-201ENST00000370654 LOXL1Q08397 574 aaPredicted RBP11.47□□□□□ -0.57
RPF1-201ENST00000370654 SWI5Q1ZZU3 235 aa11.47□□□□□ -0.57
RPF1-201ENST00000370654 TBRG1Q3YBR2 411 aa11.47□□□□□ -0.57
RPF1-201ENST00000370654 LIN52Q52LA3 116 aa11.47□□□□□ -0.57
RPF1-201ENST00000370654 C1orf140Q5VVS0 124 aa11.47□□□□□ -0.57
RPF1-201ENST00000370654 WBP2NLQ6ICG8 309 aa11.47□□□□□ -0.57
RPF1-201ENST00000370654 CREB3L2Q70SY1 520 aa11.47□□□□□ -0.57
RPF1-201ENST00000370654 MYPOPQ86VE0 399 aaPredicted RBP11.47□□□□□ -0.57
RPF1-201ENST00000370654 C17orf78Q8N4C9 275 aa11.47□□□□□ -0.57
RPF1-201ENST00000370654 OR1K1Q8NGR3 316 aa11.47□□□□□ -0.57
RPF1-201ENST00000370654 FAM168AQ92567 244 aa11.47□□□□□ -0.57
RPF1-201ENST00000370654 BCL2L2Q92843 193 aaPredicted RBP11.47□□□□□ -0.57
RPF1-201ENST00000370654 FBXO17Q96EF6 278 aa11.47□□□□□ -0.57
RPF1-201ENST00000370654 ALKBH3Q96Q83 286 aaPredicted RBP11.47□□□□□ -0.57
RPF1-201ENST00000370654 ZBTB18Q99592 522 aa11.47□□□□□ -0.57
RPF1-201ENST00000370654 SF3B5Q9BWJ5 86 aaKnown RBP11.47□□□□□ -0.57
RPF1-201ENST00000370654 PRR14Q9BWN1 585 aa11.47□□□□□ -0.57
RPF1-201ENST00000370654 P2RX2Q9UBL9 471 aa11.47□□□□□ -0.57
RPF1-201ENST00000370654 A0A096LPE4 126 aa11.46□□□□□ -0.57
RPF1-201ENST00000370654 A0A1W2PPZ6 126 aa11.46□□□□□ -0.57
RPF1-201ENST00000370654 ZNF503-AS2A6NEH8 195 aa11.46□□□□□ -0.57
RPF1-201ENST00000370654 A8MVM7 634 aa11.46□□□□□ -0.57
RPF1-201ENST00000370654 IL6P05231 212 aa11.46□□□□□ -0.57
RPF1-201ENST00000370654 CELA3BP08861 270 aa11.46□□□□□ -0.57
RPF1-201ENST00000370654 ZCCHC18P0CG32 403 aa11.46□□□□□ -0.57
RPF1-201ENST00000370654 IGHV4-31P0DP07 118 aa11.46□□□□□ -0.57
RPF1-201ENST00000370654 CALCRP30988 508 aa11.46□□□□□ -0.57
RPF1-201ENST00000370654 ANXA11P50995 505 aaKnown RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms