RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 MAMDC2Q7Z304 686 aaPredicted RBP12.3□□□□□ -0.44
SSR4-202ENST00000370085 GDF7Q7Z4P5 450 aa12.3□□□□□ -0.44
SSR4-202ENST00000370085 NAXEQ8NCW5 288 aa12.3□□□□□ -0.44
SSR4-202ENST00000370085 OR6K3Q8NGY3 331 aa12.3□□□□□ -0.44
SSR4-202ENST00000370085 SLC25A36Q96CQ1 311 aa12.3□□□□□ -0.44
SSR4-202ENST00000370085 SLC7A6OSQ96CW6 309 aaPredicted RBP12.3□□□□□ -0.44
SSR4-202ENST00000370085 ASPNQ9BXN1 380 aa12.3□□□□□ -0.44
SSR4-202ENST00000370085 AMBRA1Q9C0C7 1298 aa12.3□□□□□ -0.44
SSR4-202ENST00000370085 KLHL13Q9P2N7 655 aa12.3□□□□□ -0.44
SSR4-202ENST00000370085 PROCRQ9UNN8 238 aa12.3□□□□□ -0.44
SSR4-202ENST00000370085 CORINQ9Y5Q5 1042 aa12.3□□□□□ -0.44
SSR4-202ENST00000370085 ENPP4Q9Y6X5 453 aa12.3□□□□□ -0.44
SSR4-202ENST00000370085 PTPN13Q12923 2485 aa12.29□□□□□ -0.44
SSR4-202ENST00000370085 IGHV3-15A0A0B4J1V0 119 aa12.29□□□□□ -0.44
SSR4-202ENST00000370085 SMAD9O15198 467 aaKnown RBP12.29□□□□□ -0.44
SSR4-202ENST00000370085 SMNDC1O75940 238 aaKnown RBP eCLIP12.29□□□□□ -0.44
SSR4-202ENST00000370085 MT-ATP6P00846 226 aa12.29□□□□□ -0.44
SSR4-202ENST00000370085 HIST1H2ABP04908 130 aa12.29□□□□□ -0.44
SSR4-202ENST00000370085 IMPDH2P12268 514 aa12.29□□□□□ -0.44
SSR4-202ENST00000370085 RHCEP18577 417 aa12.29□□□□□ -0.44
SSR4-202ENST00000370085 PEX19P40855 299 aa12.29□□□□□ -0.44
SSR4-202ENST00000370085 SMIM11AP58511 58 aa12.29□□□□□ -0.44
SSR4-202ENST00000370085 SIRPAP78324 504 aa12.29□□□□□ -0.44
SSR4-202ENST00000370085 TRAM2Q15035 370 aa12.29□□□□□ -0.44
SSR4-202ENST00000370085 PLXDC2Q6UX71 529 aa12.29□□□□□ -0.44
SSR4-202ENST00000370085 CYP2R1Q6VVX0 501 aa12.29□□□□□ -0.44
SSR4-202ENST00000370085 HIST3H2AQ7L7L0 130 aa12.29□□□□□ -0.44
SSR4-202ENST00000370085 OFCC1Q8IZS5 231 aa12.29□□□□□ -0.44
SSR4-202ENST00000370085 ABHD3Q8WU67 409 aa12.29□□□□□ -0.44
SSR4-202ENST00000370085 HIST1H2ACQ93077 130 aa12.29□□□□□ -0.44
SSR4-202ENST00000370085 KTI12Q96EK9 354 aaPredicted RBP12.29□□□□□ -0.44
SSR4-202ENST00000370085 DNAJA3Q96EY1 480 aa12.29□□□□□ -0.44
SSR4-202ENST00000370085 ANKRD19PQ9H560 264 aa12.29□□□□□ -0.44
SSR4-202ENST00000370085 SLC24A3Q9HC58 644 aa12.29□□□□□ -0.44
SSR4-202ENST00000370085 RASD1Q9Y272 281 aa12.29□□□□□ -0.44
SSR4-202ENST00000370085 MED31Q9Y3C7 131 aa12.29□□□□□ -0.44
SSR4-202ENST00000370085 V9GYQ6 96 aa12.29□□□□□ -0.44
SSR4-202ENST00000370085 COL12A1Q99715 3063 aa12.29□□□□□ -0.44
SSR4-202ENST00000370085 ICE1Q9Y2F5 2266 aa12.28□□□□□ -0.44
SSR4-202ENST00000370085 AQP7P3A6NL99 342 aa12.28□□□□□ -0.44
SSR4-202ENST00000370085 ZNF724A8MTY0 619 aa12.28□□□□□ -0.44
SSR4-202ENST00000370085 PRSS44E7EML9 344 aa12.28□□□□□ -0.44
SSR4-202ENST00000370085 MSTNO14793 375 aa12.28□□□□□ -0.44
SSR4-202ENST00000370085 GSC2O15499 205 aa12.28□□□□□ -0.44
SSR4-202ENST00000370085 FABP3P05413 133 aa12.28□□□□□ -0.44
SSR4-202ENST00000370085 CD8BP10966 210 aa12.28□□□□□ -0.44
SSR4-202ENST00000370085 NQO1P15559 274 aaKnown RBP12.28□□□□□ -0.44
SSR4-202ENST00000370085 H3F3AP84243 136 aa12.28□□□□□ -0.44
SSR4-202ENST00000370085 EGR4Q05215 589 aa12.28□□□□□ -0.44
SSR4-202ENST00000370085 FOXF2Q12947 444 aa12.28□□□□□ -0.44
SSR4-202ENST00000370085 FLOT2Q14254 428 aa12.28□□□□□ -0.44
SSR4-202ENST00000370085 FAM98BQ52LJ0 330 aaKnown RBP12.28□□□□□ -0.44
SSR4-202ENST00000370085 ABLIM2Q6H8Q1 611 aa12.28□□□□□ -0.44
SSR4-202ENST00000370085 LINC00114Q6XXX2 140 aa12.28□□□□□ -0.44
SSR4-202ENST00000370085 GALNT5Q7Z7M9 940 aa12.28□□□□□ -0.44
SSR4-202ENST00000370085 KIF18BQ86Y91 864 aa12.28□□□□□ -0.44
SSR4-202ENST00000370085 CDK20Q8IZL9 346 aa12.28□□□□□ -0.44
SSR4-202ENST00000370085 TMEM239Q8WW34 195 aa12.28□□□□□ -0.44
SSR4-202ENST00000370085 TAAR8Q969N4 342 aa12.28□□□□□ -0.44
SSR4-202ENST00000370085 ZNF347Q96SE7 839 aa12.28□□□□□ -0.44
SSR4-202ENST00000370085 SF3B5Q9BWJ5 86 aaKnown RBP12.28□□□□□ -0.44
SSR4-202ENST00000370085 BCO1Q9HAY6 547 aa12.28□□□□□ -0.44
SSR4-202ENST00000370085 KRCC1Q9NPI7 259 aaPredicted RBP12.28□□□□□ -0.44
SSR4-202ENST00000370085 PARPBPQ9NWS1 579 aa12.28□□□□□ -0.44
SSR4-202ENST00000370085 CLEC4AQ9UMR7 237 aa12.28□□□□□ -0.44
SSR4-202ENST00000370085 B3GALT5Q9Y2C3 310 aa12.28□□□□□ -0.44
SSR4-202ENST00000370085 IGKV1D-42A0A075B6H8 117 aa12.27□□□□□ -0.45
SSR4-202ENST00000370085 IGKV3D-15A0A087WSY6 115 aa12.27□□□□□ -0.45
SSR4-202ENST00000370085 A1L4Q6 167 aa12.27□□□□□ -0.45
SSR4-202ENST00000370085 AQP12BA6NM10 295 aa12.27□□□□□ -0.45
SSR4-202ENST00000370085 TNFSF13O75888 250 aa12.27□□□□□ -0.45
SSR4-202ENST00000370085 AKR7A3O95154 331 aa12.27□□□□□ -0.45
SSR4-202ENST00000370085 OR6A2O95222 327 aa12.27□□□□□ -0.45
SSR4-202ENST00000370085 IGF2P01344 180 aa12.27□□□□□ -0.45
SSR4-202ENST00000370085 MT-ND1P03886 318 aa12.27□□□□□ -0.45
SSR4-202ENST00000370085 AGTR1P30556 359 aa12.27□□□□□ -0.45
SSR4-202ENST00000370085 KIR2DL2P43627 348 aaPredicted RBP12.27□□□□□ -0.45
SSR4-202ENST00000370085 YAP1P46937 504 aaKnown RBP12.27□□□□□ -0.45
SSR4-202ENST00000370085 SLC16A1P53985 500 aa12.27□□□□□ -0.45
SSR4-202ENST00000370085 IL1RL1Q01638 556 aa12.27□□□□□ -0.45
SSR4-202ENST00000370085 CHRNB3Q05901 458 aa12.27□□□□□ -0.45
SSR4-202ENST00000370085 H1FNTQ75WM6 255 aaPredicted RBP12.27□□□□□ -0.45
SSR4-202ENST00000370085 GPAT4Q86UL3 456 aa12.27□□□□□ -0.45
SSR4-202ENST00000370085 TUSC5Q8IXB3 177 aa12.27□□□□□ -0.45
SSR4-202ENST00000370085 AQP12AQ8IXF9 295 aa12.27□□□□□ -0.45
SSR4-202ENST00000370085 RNF113BQ8IZP6 322 aaKnown RBP12.27□□□□□ -0.45
SSR4-202ENST00000370085 SCAIQ8N9R8 606 aa12.27□□□□□ -0.45
SSR4-202ENST00000370085 ADPRHL1Q8NDY3 354 aa12.27□□□□□ -0.45
SSR4-202ENST00000370085 STARD4Q96DR4 205 aa12.27□□□□□ -0.45
SSR4-202ENST00000370085 CLPTM1LQ96KA5 538 aa12.27□□□□□ -0.45
SSR4-202ENST00000370085 PSMG3-AS1Q96PY0 264 aa12.27□□□□□ -0.45
SSR4-202ENST00000370085 ZNF300Q96RE9 604 aaPredicted RBP12.27□□□□□ -0.45
SSR4-202ENST00000370085 PIP5K1AQ99755 562 aa12.27□□□□□ -0.45
SSR4-202ENST00000370085 PSD2Q9BQI7 771 aa12.27□□□□□ -0.45
SSR4-202ENST00000370085 ZNF426Q9BUY5 554 aa12.27□□□□□ -0.45
SSR4-202ENST00000370085 UCK2Q9BZX2 261 aa12.27□□□□□ -0.45
SSR4-202ENST00000370085 LRMDAQ9H2I8 198 aa12.27□□□□□ -0.45
SSR4-202ENST00000370085 MAGIXQ9H6Y5 334 aa12.27□□□□□ -0.45
SSR4-202ENST00000370085 FKRPQ9H9S5 495 aa12.27□□□□□ -0.45
SSR4-202ENST00000370085 IL1RAPQ9NPH3 570 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms