RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 ZNF28P17035 718 aa4.9□□□□□ -1.63
SMNDC1-202ENST00000369603 RPS5P46782 204 aaKnown RBP4.9□□□□□ -1.63
SMNDC1-202ENST00000369603 ART1P52961 327 aa4.9□□□□□ -1.63
SMNDC1-202ENST00000369603 BTG2P78543 158 aa4.9□□□□□ -1.63
SMNDC1-202ENST00000369603 GPR50Q13585 617 aa4.9□□□□□ -1.63
SMNDC1-202ENST00000369603 KCNAB1Q14722 419 aa4.9□□□□□ -1.63
SMNDC1-202ENST00000369603 OR7A5Q15622 319 aa4.9□□□□□ -1.63
SMNDC1-202ENST00000369603 EXT1Q16394 746 aa4.9□□□□□ -1.63
SMNDC1-202ENST00000369603 TMEM69Q5SWH9 247 aa4.9□□□□□ -1.63
SMNDC1-202ENST00000369603 ACSM5Q6NUN0 579 aa4.9□□□□□ -1.63
SMNDC1-202ENST00000369603 TMEM17Q86X19 198 aa4.9□□□□□ -1.63
SMNDC1-202ENST00000369603 TIGD4Q8IY51 512 aa4.9□□□□□ -1.63
SMNDC1-202ENST00000369603 NKD1Q969G9 470 aa4.9□□□□□ -1.63
SMNDC1-202ENST00000369603 SCGB3A2Q96PL1 93 aa4.9□□□□□ -1.63
SMNDC1-202ENST00000369603 ALG12Q9BV10 488 aa4.9□□□□□ -1.63
SMNDC1-202ENST00000369603 CHRDQ9H2X0 955 aa4.9□□□□□ -1.63
SMNDC1-202ENST00000369603 SLA2Q9H6Q3 261 aa4.9□□□□□ -1.63
SMNDC1-202ENST00000369603 ABRACLQ9P1F3 81 aa4.9□□□□□ -1.63
SMNDC1-202ENST00000369603 TMED7Q9Y3B3 224 aa4.9□□□□□ -1.63
SMNDC1-202ENST00000369603 TSC2P49815 1807 aa4.9□□□□□ -1.63
SMNDC1-202ENST00000369603 EPOPA6NHQ4 379 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 METTL15A6NJ78 407 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 H3BML4 177 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 SULT2B1O00204 365 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 NRG2O14511 850 aaPredicted RBP4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 SIGLEC6O43699 453 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 PIP5K1CO60331 668 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 RBBP9O75884 186 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 CD53P19397 219 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 EPHA2P29317 976 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 RBMS1P29558 406 aaKnown RBP4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 TNFSF8P32971 234 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 AQP2P41181 271 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 MTNR1BP49286 362 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 P2RX1P51575 399 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 PNLIPRP2P54317 469 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 TSPAN5P62079 268 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 SGCAQ16586 387 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 LPAL2Q16609 132 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 FAM69AQ5T7M9 428 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 HACD4Q5VWC8 232 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 C12orf73Q69YU5 71 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 LACC1Q8IV20 430 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 FRMD1Q8N878 549 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 STT3BQ8TCJ2 826 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 ZNF431Q8TF32 576 aaPredicted RBP4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 ADAMTS14Q8WXS8 1223 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 SCARF2Q96GP6 870 aaPredicted RBP4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 OR5B2Q96R09 309 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 SNX18Q96RF0 628 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 ABCG5Q9H222 651 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 FBXO8Q9NRD0 319 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 TXNL4BQ9NX01 149 aaKnown RBP4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 TAS2R8Q9NYW2 309 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 KCND3Q9UK17 655 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 RNF215Q9Y6U7 377 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 ZFC3H1O60293 1989 aaKnown RBP4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 A0A1W2PPK0 400 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 IDSB3KWA1 339 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 SOCS6O14544 535 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 SEC14L5O43304 696 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 SLC16A7O60669 478 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 IL33O95760 270 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 CAPNS1P04632 268 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 HCKP08631 526 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 BMP1P13497 986 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 DRD5P21918 477 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 OR3A3P47888 321 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 OR3A2P47893 321 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 PITPNBP48739 271 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 SIRPAP78324 504 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 MRPS10P82664 201 aaKnown RBP4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 BDH1Q02338 343 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 EEF1A2Q05639 463 aaKnown RBP4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 ARFRP1Q13795 201 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 SMAD2Q15796 467 aaKnown RBP4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 PRICKLE4Q2TBC4 344 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 EMC4Q5J8M3 183 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 BCL2L15Q5TBC7 163 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 SLC22A10Q63ZE4 541 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 CNIH2Q6PI25 160 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 ZNF782Q6ZMW2 699 aaPredicted RBP4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 P4HA3Q7Z4N8 544 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 LRRC28Q86X40 367 aaPredicted RBP4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 ZNF454Q8N9F8 522 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 OR14L1PQ8NHC6 308 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 PFN4Q8NHR9 129 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 TRMT10AQ8TBZ6 339 aaKnown RBP4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 NEK7Q8TDX7 302 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 DEDD2Q8WXF8 326 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 SNAPC3Q92966 411 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 PSD2Q9BQI7 771 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 CENPOQ9BU64 300 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 LDAHQ9H6V9 325 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 FGF20Q9NP95 211 aaPredicted RBP4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 ATP13A2Q9NQ11 1180 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 TAS2R16Q9NYV7 291 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 EIF3KQ9UBQ5 218 aaKnown RBP4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 NPFFR2Q9Y5X5 522 aa4.89□□□□□ -1.63
SMNDC1-202ENST00000369603 KCNE3Q9Y6H6 103 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms