RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 MBD3L4A6NDZ8 208 aaPredicted RBP12.42□□□□□ -0.42
TPM3-211ENST00000368531 MBD3L3A6NE82 208 aaPredicted RBP12.42□□□□□ -0.42
TPM3-211ENST00000368531 MBD3L5A6NJ08 208 aaPredicted RBP12.42□□□□□ -0.42
TPM3-211ENST00000368531 ENO4A6NNW6 628 aa12.42□□□□□ -0.42
TPM3-211ENST00000368531 ZNF814B7Z6K7 855 aa12.42□□□□□ -0.42
TPM3-211ENST00000368531 GNGT2O14610 69 aa12.42□□□□□ -0.42
TPM3-211ENST00000368531 SMAD9O15198 467 aaKnown RBP12.42□□□□□ -0.42
TPM3-211ENST00000368531 OR2T1O43869 369 aa12.42□□□□□ -0.42
TPM3-211ENST00000368531 RAMP1O60894 148 aa12.42□□□□□ -0.42
TPM3-211ENST00000368531 FKBP6O75344 327 aa12.42□□□□□ -0.42
TPM3-211ENST00000368531 TIPRLO75663 272 aa12.42□□□□□ -0.42
TPM3-211ENST00000368531 PLGP00747 810 aaPredicted RBP12.42□□□□□ -0.42
TPM3-211ENST00000368531 CST1P01037 141 aa12.42□□□□□ -0.42
TPM3-211ENST00000368531 BGLAPP02818 100 aa12.42□□□□□ -0.42
TPM3-211ENST00000368531 IFI30P13284 250 aa12.42□□□□□ -0.42
TPM3-211ENST00000368531 GRPRP30550 384 aa12.42□□□□□ -0.42
TPM3-211ENST00000368531 RBM34P42696 430 aaKnown RBP12.42□□□□□ -0.42
TPM3-211ENST00000368531 MAGEA2P43356 314 aa12.42□□□□□ -0.42
TPM3-211ENST00000368531 SMIM11AP58511 58 aa12.42□□□□□ -0.42
TPM3-211ENST00000368531 IL1RL1Q01638 556 aa12.42□□□□□ -0.42
TPM3-211ENST00000368531 OTUD3Q5T2D3 398 aaPredicted RBP12.42□□□□□ -0.42
TPM3-211ENST00000368531 FAM69AQ5T7M9 428 aa12.42□□□□□ -0.42
TPM3-211ENST00000368531 OR2T5Q6IEZ7 315 aa12.42□□□□□ -0.42
TPM3-211ENST00000368531 C5orf46Q6UWT4 87 aa12.42□□□□□ -0.42
TPM3-211ENST00000368531 CCDC71Q8IV32 467 aaPredicted RBP12.42□□□□□ -0.42
TPM3-211ENST00000368531 NRMQ8IXM6 262 aa12.42□□□□□ -0.42
TPM3-211ENST00000368531 LRRC17Q8N6Y2 441 aa12.42□□□□□ -0.42
TPM3-211ENST00000368531 OR2T29Q8NH02 315 aa12.42□□□□□ -0.42
TPM3-211ENST00000368531 MBD3L2Q8NHZ7 208 aaPredicted RBP12.42□□□□□ -0.42
TPM3-211ENST00000368531 ABHD3Q8WU67 409 aa12.42□□□□□ -0.42
TPM3-211ENST00000368531 ACOT11Q8WXI4 607 aaPredicted RBP12.42□□□□□ -0.42
TPM3-211ENST00000368531 ZNF775Q96BV0 537 aaPredicted RBP12.42□□□□□ -0.42
TPM3-211ENST00000368531 TM9SF2Q99805 663 aa12.42□□□□□ -0.42
TPM3-211ENST00000368531 ZNF426Q9BUY5 554 aa12.42□□□□□ -0.42
TPM3-211ENST00000368531 DENND2DQ9H6A0 471 aaPredicted RBP12.42□□□□□ -0.42
TPM3-211ENST00000368531 C20orf141Q9NUB4 165 aa12.42□□□□□ -0.42
TPM3-211ENST00000368531 CCM2LQ9NUG4 571 aaPredicted RBP12.42□□□□□ -0.42
TPM3-211ENST00000368531 SEC14L4Q9UDX3 406 aa12.42□□□□□ -0.42
TPM3-211ENST00000368531 U3KQV3 271 aa12.42□□□□□ -0.42
TPM3-211ENST00000368531 CHD6Q8TD26 2715 aa12.41□□□□□ -0.42
TPM3-211ENST00000368531 A0A0G2JNJ9 132 aa12.41□□□□□ -0.42
TPM3-211ENST00000368531 A0A1W2PRQ8 180 aa12.41□□□□□ -0.42
TPM3-211ENST00000368531 FTCDNL1E5RQL4 147 aa12.41□□□□□ -0.42
TPM3-211ENST00000368531 M0R082 166 aa12.41□□□□□ -0.42
TPM3-211ENST00000368531 TNFRSF11BO00300 401 aa12.41□□□□□ -0.42
TPM3-211ENST00000368531 AGFG2O95081 481 aa12.41□□□□□ -0.42
TPM3-211ENST00000368531 TMIGD3P0DMS9 266 aaPredicted RBP12.41□□□□□ -0.42
TPM3-211ENST00000368531 FCGR2AP12318 317 aa12.41□□□□□ -0.42
TPM3-211ENST00000368531 TIMP3P35625 211 aa12.41□□□□□ -0.42
TPM3-211ENST00000368531 ACTR3P61158 418 aa12.41□□□□□ -0.42
TPM3-211ENST00000368531 SIRPAP78324 504 aa12.41□□□□□ -0.42
TPM3-211ENST00000368531 ADORA2A-AS1P86434 159 aa12.41□□□□□ -0.42
TPM3-211ENST00000368531 RASGEF1BQ0VAM2 473 aa12.41□□□□□ -0.42
TPM3-211ENST00000368531 FOXF2Q12947 444 aa12.41□□□□□ -0.42
TPM3-211ENST00000368531 DGCR6Q14129 220 aa12.41□□□□□ -0.42
TPM3-211ENST00000368531 SEC23BQ15437 767 aa12.41□□□□□ -0.42
TPM3-211ENST00000368531 EXOC3L2Q2M3D2 409 aa12.41□□□□□ -0.42
TPM3-211ENST00000368531 TMEM225Q6GV28 225 aa12.41□□□□□ -0.42
TPM3-211ENST00000368531 KDM8Q8N371 416 aa12.41□□□□□ -0.42
TPM3-211ENST00000368531 CNEP1R1Q8N9A8 125 aa12.41□□□□□ -0.42
TPM3-211ENST00000368531 NAXEQ8NCW5 288 aa12.41□□□□□ -0.42
TPM3-211ENST00000368531 ZNF417Q8TAU3 575 aa12.41□□□□□ -0.42
TPM3-211ENST00000368531 SLC7A13Q8TCU3 470 aa12.41□□□□□ -0.42
TPM3-211ENST00000368531 PYDC1Q8WXC3 89 aa12.41□□□□□ -0.42
TPM3-211ENST00000368531 SDCCAG3Q96C92 435 aa12.41□□□□□ -0.42
TPM3-211ENST00000368531 SGTBQ96EQ0 304 aa12.41□□□□□ -0.42
TPM3-211ENST00000368531 DHRS1Q96LJ7 313 aa12.41□□□□□ -0.42
TPM3-211ENST00000368531 ALPK1Q96QP1 1244 aa12.41□□□□□ -0.42
TPM3-211ENST00000368531 ZNF587Q96SQ5 575 aaPredicted RBP12.41□□□□□ -0.42
TPM3-211ENST00000368531 ASPNQ9BXN1 380 aa12.41□□□□□ -0.42
TPM3-211ENST00000368531 KLHL4Q9C0H6 718 aa12.41□□□□□ -0.42
TPM3-211ENST00000368531 YY1AP1Q9H869 796 aa12.41□□□□□ -0.42
TPM3-211ENST00000368531 REEP1Q9H902 201 aa12.41□□□□□ -0.42
TPM3-211ENST00000368531 VNN3Q9NY84 501 aa12.41□□□□□ -0.42
TPM3-211ENST00000368531 Q9UFV3 132 aa12.41□□□□□ -0.42
TPM3-211ENST00000368531 TMCC3Q9ULS5 477 aa12.41□□□□□ -0.42
TPM3-211ENST00000368531 SAMHD1Q9Y3Z3 626 aaKnown RBP12.41□□□□□ -0.42
TPM3-211ENST00000368531 NBASA2RRP1 2371 aa12.4□□□□□ -0.42
TPM3-211ENST00000368531 EIF1BO60739 113 aaKnown RBP12.4□□□□□ -0.42
TPM3-211ENST00000368531 ZG16O60844 167 aa12.4□□□□□ -0.42
TPM3-211ENST00000368531 RCBTB2O95199 551 aa12.4□□□□□ -0.42
TPM3-211ENST00000368531 HIST1H2ABP04908 130 aa12.4□□□□□ -0.42
TPM3-211ENST00000368531 FUT1P19526 365 aa12.4□□□□□ -0.42
TPM3-211ENST00000368531 GPR4P46093 362 aa12.4□□□□□ -0.42
TPM3-211ENST00000368531 IST1P53990 364 aa12.4□□□□□ -0.42
TPM3-211ENST00000368531 PMS2P3Q13401 168 aa12.4□□□□□ -0.42
TPM3-211ENST00000368531 LAPTM4AQ15012 233 aa12.4□□□□□ -0.42
TPM3-211ENST00000368531 ZNF74Q16587 644 aa12.4□□□□□ -0.42
TPM3-211ENST00000368531 RIPPLY2Q5TAB7 128 aa12.4□□□□□ -0.42
TPM3-211ENST00000368531 GTF2IRD2BQ6EKJ0 949 aa12.4□□□□□ -0.42
TPM3-211ENST00000368531 PAQR6Q6TCH4 344 aa12.4□□□□□ -0.42
TPM3-211ENST00000368531 MBOAT2Q6ZWT7 520 aa12.4□□□□□ -0.42
TPM3-211ENST00000368531 ZNF771Q7L3S4 317 aaPredicted RBP12.4□□□□□ -0.42
TPM3-211ENST00000368531 HIST3H2AQ7L7L0 130 aa12.4□□□□□ -0.42
TPM3-211ENST00000368531 MAMDC2Q7Z304 686 aaPredicted RBP12.4□□□□□ -0.42
TPM3-211ENST00000368531 GPAT4Q86UL3 456 aa12.4□□□□□ -0.42
TPM3-211ENST00000368531 GTF2IRD2Q86UP8 949 aa12.4□□□□□ -0.42
TPM3-211ENST00000368531 PAPD5Q8NDF8 572 aaKnown RBP12.4□□□□□ -0.42
TPM3-211ENST00000368531 OR4K5Q8NGD3 323 aa12.4□□□□□ -0.42
TPM3-211ENST00000368531 RNF128Q8TEB7 428 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms