RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 ACY1Q03154 408 aa12.8□□□□□ -0.36
USF1-202ENST00000368020 ASAH1Q13510 395 aa12.8□□□□□ -0.36
USF1-202ENST00000368020 RIN1Q13671 783 aa12.8□□□□□ -0.36
USF1-202ENST00000368020 EBPQ15125 230 aaKnown RBP12.8□□□□□ -0.36
USF1-202ENST00000368020 ZNF79Q15937 498 aa12.8□□□□□ -0.36
USF1-202ENST00000368020 ZNF74Q16587 644 aa12.8□□□□□ -0.36
USF1-202ENST00000368020 HBMQ6B0K9 141 aa12.8□□□□□ -0.36
USF1-202ENST00000368020 FAAH2Q6GMR7 532 aa12.8□□□□□ -0.36
USF1-202ENST00000368020 CCBE1Q6UXH8 406 aaPredicted RBP12.8□□□□□ -0.36
USF1-202ENST00000368020 CYB561A3Q8NBI2 242 aa12.8□□□□□ -0.36
USF1-202ENST00000368020 PLPP5Q8NEB5 264 aa12.8□□□□□ -0.36
USF1-202ENST00000368020 OR1N1Q8NGS0 311 aa12.8□□□□□ -0.36
USF1-202ENST00000368020 PHYHIPQ92561 330 aa12.8□□□□□ -0.36
USF1-202ENST00000368020 TBX5Q99593 518 aa12.8□□□□□ -0.36
USF1-202ENST00000368020 DPYSL5Q9BPU6 564 aa12.8□□□□□ -0.36
USF1-202ENST00000368020 GTPBP2Q9BX10 602 aaKnown RBP12.8□□□□□ -0.36
USF1-202ENST00000368020 TGIF2Q9GZN2 237 aa12.8□□□□□ -0.36
USF1-202ENST00000368020 MIXL1Q9H2W2 232 aa12.8□□□□□ -0.36
USF1-202ENST00000368020 NANSQ9NR45 359 aa12.8□□□□□ -0.36
USF1-202ENST00000368020 FGF21Q9NSA1 209 aa12.8□□□□□ -0.36
USF1-202ENST00000368020 DHCR7Q9UBM7 475 aaKnown RBP12.8□□□□□ -0.36
USF1-202ENST00000368020 ALG1L2C9J202 215 aa12.79□□□□□ -0.36
USF1-202ENST00000368020 HYAL3O43820 417 aaPredicted RBP12.79□□□□□ -0.36
USF1-202ENST00000368020 FOLR1P15328 257 aa12.79□□□□□ -0.36
USF1-202ENST00000368020 CSF2RBP32927 897 aa12.79□□□□□ -0.36
USF1-202ENST00000368020 SLC25A1P53007 311 aa12.79□□□□□ -0.36
USF1-202ENST00000368020 PNLIPRP2P54317 469 aa12.79□□□□□ -0.36
USF1-202ENST00000368020 ZNF85Q03923 595 aa12.79□□□□□ -0.36
USF1-202ENST00000368020 MRPL28Q13084 256 aaKnown RBP12.79□□□□□ -0.36
USF1-202ENST00000368020 CD226Q15762 336 aa12.79□□□□□ -0.36
USF1-202ENST00000368020 NDUFAF6Q330K2 333 aa12.79□□□□□ -0.36
USF1-202ENST00000368020 TCEAL6Q6IPX3 200 aa12.79□□□□□ -0.36
USF1-202ENST00000368020 TMEM91Q6ZNR0 172 aa12.79□□□□□ -0.36
USF1-202ENST00000368020 JAZF1Q86VZ6 243 aa12.79□□□□□ -0.36
USF1-202ENST00000368020 SYT14Q8NB59 555 aa12.79□□□□□ -0.36
USF1-202ENST00000368020 SDR9C7Q8NEX9 313 aa12.79□□□□□ -0.36
USF1-202ENST00000368020 OR4K13Q8NH42 304 aa12.79□□□□□ -0.36
USF1-202ENST00000368020 ZNF563Q8TA94 476 aa12.79□□□□□ -0.36
USF1-202ENST00000368020 TSLPQ969D9 159 aa12.79□□□□□ -0.36
USF1-202ENST00000368020 TCEAL3Q969E4 200 aa12.79□□□□□ -0.36
USF1-202ENST00000368020 ZNF501Q96CX3 271 aaPredicted RBP12.79□□□□□ -0.36
USF1-202ENST00000368020 CLIP3Q96DZ5 547 aa12.79□□□□□ -0.36
USF1-202ENST00000368020 GAL3ST4Q96RP7 486 aa12.79□□□□□ -0.36
USF1-202ENST00000368020 TIMP4Q99727 224 aa12.79□□□□□ -0.36
USF1-202ENST00000368020 ATF6BQ99941 703 aa12.79□□□□□ -0.36
USF1-202ENST00000368020 TTYH2Q9BSA4 534 aa12.79□□□□□ -0.36
USF1-202ENST00000368020 NMNAT2Q9BZQ4 307 aa12.79□□□□□ -0.36
USF1-202ENST00000368020 WWTR1Q9GZV5 400 aa12.79□□□□□ -0.36
USF1-202ENST00000368020 SLC22A4Q9H015 551 aa12.79□□□□□ -0.36
USF1-202ENST00000368020 SMOC1Q9H4F8 434 aa12.79□□□□□ -0.36
USF1-202ENST00000368020 IGKV1D-42A0A075B6H8 117 aa12.79□□□□□ -0.36
USF1-202ENST00000368020 ZC3H12DA2A288 527 aaKnown RBP12.79□□□□□ -0.36
USF1-202ENST00000368020 CD8B2A6NJW9 211 aa12.79□□□□□ -0.36
USF1-202ENST00000368020 J3QLW9 94 aa12.79□□□□□ -0.36
USF1-202ENST00000368020 TMEM127O75204 238 aa12.79□□□□□ -0.36
USF1-202ENST00000368020 HIST1H2ABP04908 130 aa12.79□□□□□ -0.36
USF1-202ENST00000368020 CD14P08571 375 aa12.79□□□□□ -0.36
USF1-202ENST00000368020 MRPL3P09001 348 aaKnown RBP12.79□□□□□ -0.36
USF1-202ENST00000368020 CD8BP10966 210 aa12.79□□□□□ -0.36
USF1-202ENST00000368020 ZNF19P17023 458 aa12.79□□□□□ -0.36
USF1-202ENST00000368020 PGCP20142 388 aa12.79□□□□□ -0.36
USF1-202ENST00000368020 CFHR1Q03591 330 aa12.79□□□□□ -0.36
USF1-202ENST00000368020 PLCXD2Q0VAA5 305 aa12.79□□□□□ -0.36
USF1-202ENST00000368020 CSRP2Q16527 193 aa12.79□□□□□ -0.36
USF1-202ENST00000368020 CDONQ4KMG0 1287 aa12.79□□□□□ -0.36
USF1-202ENST00000368020 SNAP47Q5SQN1 464 aa12.79□□□□□ -0.36
USF1-202ENST00000368020 FCRLBQ6BAA4 426 aa12.79□□□□□ -0.36
USF1-202ENST00000368020 GPR139Q6DWJ6 353 aa12.79□□□□□ -0.36
USF1-202ENST00000368020 DMKNQ6E0U4 476 aaPredicted RBP12.79□□□□□ -0.36
USF1-202ENST00000368020 DESI1Q6ICB0 168 aa12.79□□□□□ -0.36
USF1-202ENST00000368020 RHBDD2Q6NTF9 364 aa12.79□□□□□ -0.36
USF1-202ENST00000368020 TMEM71Q6P5X7 295 aa12.79□□□□□ -0.36
USF1-202ENST00000368020 ARL9Q6T311 187 aa12.79□□□□□ -0.36
USF1-202ENST00000368020 C5orf46Q6UWT4 87 aa12.79□□□□□ -0.36
USF1-202ENST00000368020 GDPD3Q7L5L3 318 aa12.79□□□□□ -0.36
USF1-202ENST00000368020 HIST3H2AQ7L7L0 130 aa12.79□□□□□ -0.36
USF1-202ENST00000368020 MISPQ8IVT2 679 aa12.79□□□□□ -0.36
USF1-202ENST00000368020 SLC35F2Q8IXU6 374 aa12.79□□□□□ -0.36
USF1-202ENST00000368020 Q8N9G6 341 aaPredicted RBP12.79□□□□□ -0.36
USF1-202ENST00000368020 NPEPL1Q8NDH3 523 aa12.79□□□□□ -0.36
USF1-202ENST00000368020 HIST1H2ACQ93077 130 aa12.79□□□□□ -0.36
USF1-202ENST00000368020 MNTQ99583 582 aa12.79□□□□□ -0.36
USF1-202ENST00000368020 ADAM19Q9H013 955 aa12.79□□□□□ -0.36
USF1-202ENST00000368020 FKRPQ9H9S5 495 aa12.79□□□□□ -0.36
USF1-202ENST00000368020 MMP25Q9NPA2 562 aa12.79□□□□□ -0.36
USF1-202ENST00000368020 C14orf119Q9NWQ9 140 aa12.79□□□□□ -0.36
USF1-202ENST00000368020 MPDZO75970 2070 aa12.78□□□□□ -0.36
USF1-202ENST00000368020 A8MUA0 341 aa12.78□□□□□ -0.36
USF1-202ENST00000368020 GNB5O14775 395 aa12.78□□□□□ -0.36
USF1-202ENST00000368020 OGG1O15527 345 aa12.78□□□□□ -0.36
USF1-202ENST00000368020 SIGLEC6O43699 453 aa12.78□□□□□ -0.36
USF1-202ENST00000368020 GPRIN2O60269 458 aa12.78□□□□□ -0.36
USF1-202ENST00000368020 TSPAN2O60636 221 aa12.78□□□□□ -0.36
USF1-202ENST00000368020 GATBO75879 557 aaKnown RBP12.78□□□□□ -0.36
USF1-202ENST00000368020 ARL6IP5O75915 188 aa12.78□□□□□ -0.36
USF1-202ENST00000368020 GLCEO94923 617 aa12.78□□□□□ -0.36
USF1-202ENST00000368020 TXNDC12O95881 172 aa12.78□□□□□ -0.36
USF1-202ENST00000368020 MT-ATP6P00846 226 aa12.78□□□□□ -0.36
USF1-202ENST00000368020 SDHAP31040 664 aa12.78□□□□□ -0.36
USF1-202ENST00000368020 EVX1P49640 407 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms