RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 GOSR2O14653 212 aa8.06□□□□□ -1.12
SYNE1-206ENST00000367253 RPLP1P05386 114 aaKnown RBP8.06□□□□□ -1.12
SYNE1-206ENST00000367253 CD3GP09693 182 aa8.06□□□□□ -1.12
SYNE1-206ENST00000367253 USF1P22415 310 aaPredicted RBP8.06□□□□□ -1.12
SYNE1-206ENST00000367253 SNRPEP62304 92 aaKnown RBP8.06□□□□□ -1.12
SYNE1-206ENST00000367253 RPL7AP62424 266 aaKnown RBP8.06□□□□□ -1.12
SYNE1-206ENST00000367253 AGAP6Q5VW22 663 aa8.06□□□□□ -1.12
SYNE1-206ENST00000367253 BMP8AQ7Z5Y6 402 aa8.06□□□□□ -1.12
SYNE1-206ENST00000367253 SIAH1Q8IUQ4 282 aa8.06□□□□□ -1.12
SYNE1-206ENST00000367253 FAM26EQ8N5C1 309 aa8.06□□□□□ -1.12
SYNE1-206ENST00000367253 HOXB13Q92826 284 aaPredicted RBP8.06□□□□□ -1.12
SYNE1-206ENST00000367253 OR4K3Q96R72 315 aa8.06□□□□□ -1.12
SYNE1-206ENST00000367253 TRIB1Q96RU8 372 aa8.06□□□□□ -1.12
SYNE1-206ENST00000367253 CNTNAP3Q9BZ76 1288 aa8.06□□□□□ -1.12
SYNE1-206ENST00000367253 ZBP1Q9H171 429 aa8.06□□□□□ -1.12
SYNE1-206ENST00000367253 CHRDQ9H2X0 955 aa8.06□□□□□ -1.12
SYNE1-206ENST00000367253 NARFLQ9H6Q4 476 aa8.06□□□□□ -1.12
SYNE1-206ENST00000367253 ZNF71Q9NQZ8 489 aaPredicted RBP8.06□□□□□ -1.12
SYNE1-206ENST00000367253 TAS2R8Q9NYW2 309 aa8.06□□□□□ -1.12
SYNE1-206ENST00000367253 LIPT1Q9Y234 373 aa8.06□□□□□ -1.12
SYNE1-206ENST00000367253 TCHHQ07283 1943 aa8.06□□□□□ -1.12
SYNE1-206ENST00000367253 ARID1AO14497 2285 aa8.06□□□□□ -1.12
SYNE1-206ENST00000367253 OLFM2O95897 454 aa8.06□□□□□ -1.12
SYNE1-206ENST00000367253 C7P10643 843 aa8.06□□□□□ -1.12
SYNE1-206ENST00000367253 AOC1P19801 751 aa8.06□□□□□ -1.12
SYNE1-206ENST00000367253 IMPDH1P20839 514 aa8.06□□□□□ -1.12
SYNE1-206ENST00000367253 HLA-BQ31612 363 aa8.06□□□□□ -1.12
SYNE1-206ENST00000367253 FAM58AQ8N1B3 248 aa8.06□□□□□ -1.12
SYNE1-206ENST00000367253 OR10Z1Q8NGY1 313 aa8.06□□□□□ -1.12
SYNE1-206ENST00000367253 GLYATL2Q8WU03 294 aa8.06□□□□□ -1.12
SYNE1-206ENST00000367253 LRRN4Q8WUT4 740 aa8.06□□□□□ -1.12
SYNE1-206ENST00000367253 TNFRSF14Q92956 283 aa8.06□□□□□ -1.12
SYNE1-206ENST00000367253 HBEGFQ99075 208 aa8.06□□□□□ -1.12
SYNE1-206ENST00000367253 CMSS1Q9BQ75 279 aaKnown RBP8.06□□□□□ -1.12
SYNE1-206ENST00000367253 ZNF696Q9H7X3 374 aa8.06□□□□□ -1.12
SYNE1-206ENST00000367253 LIN7BQ9HAP6 207 aa8.06□□□□□ -1.12
SYNE1-206ENST00000367253 C1GALT1Q9NS00 363 aa8.06□□□□□ -1.12
SYNE1-206ENST00000367253 PIGVQ9NUD9 493 aa8.06□□□□□ -1.12
SYNE1-206ENST00000367253 KLHL9Q9P2J3 617 aa8.06□□□□□ -1.12
SYNE1-206ENST00000367253 TMEM14AQ9Y6G1 99 aa8.06□□□□□ -1.12
SYNE1-206ENST00000367253 SLX4Q8IY92 1834 aa8.06□□□□□ -1.12
SYNE1-206ENST00000367253 SLC5A10A0PJK1 596 aa8.06□□□□□ -1.12
SYNE1-206ENST00000367253 PRAMEF27A3QJZ7 478 aa8.06□□□□□ -1.12
SYNE1-206ENST00000367253 PRAMEF25A6NGN4 478 aa8.06□□□□□ -1.12
SYNE1-206ENST00000367253 YJEFN3A6XGL0 299 aa8.06□□□□□ -1.12
SYNE1-206ENST00000367253 LGALS8O00214 317 aa8.06□□□□□ -1.12
SYNE1-206ENST00000367253 EPHB6O15197 1021 aa8.06□□□□□ -1.12
SYNE1-206ENST00000367253 PRAMEF4O60810 478 aa8.06□□□□□ -1.12
SYNE1-206ENST00000367253 PRAMEF11O60813 436 aa8.06□□□□□ -1.12
SYNE1-206ENST00000367253 IFNGR1P15260 489 aa8.06□□□□□ -1.12
SYNE1-206ENST00000367253 ELK4P28324 431 aa8.06□□□□□ -1.12
SYNE1-206ENST00000367253 CD34P28906 385 aa8.06□□□□□ -1.12
SYNE1-206ENST00000367253 RPS13P62277 151 aaKnown RBP8.06□□□□□ -1.12
SYNE1-206ENST00000367253 DEFB134Q4QY38 66 aa8.06□□□□□ -1.12
SYNE1-206ENST00000367253 C9orf50Q5SZB4 431 aa8.06□□□□□ -1.12
SYNE1-206ENST00000367253 PRAMEF5Q5TYX0 476 aa8.06□□□□□ -1.12
SYNE1-206ENST00000367253 ZNF468Q5VIY5 522 aaPredicted RBP8.06□□□□□ -1.12
SYNE1-206ENST00000367253 PRAMEF9Q5VWM5 478 aa8.06□□□□□ -1.12
SYNE1-206ENST00000367253 PRAMEF6Q5VXH4 476 aa8.06□□□□□ -1.12
SYNE1-206ENST00000367253 TNFAIP8L2Q6P589 184 aaPredicted RBP8.06□□□□□ -1.12
SYNE1-206ENST00000367253 AGTRAPQ6RW13 159 aa8.06□□□□□ -1.12
SYNE1-206ENST00000367253 ZNF619Q8N2I2 560 aa8.06□□□□□ -1.12
SYNE1-206ENST00000367253 OR52N1Q8NH53 320 aa8.06□□□□□ -1.12
SYNE1-206ENST00000367253 GGHQ92820 318 aa8.06□□□□□ -1.12
SYNE1-206ENST00000367253 RAB1CQ92928 201 aa8.06□□□□□ -1.12
SYNE1-206ENST00000367253 RSPRY1Q96DX4 576 aa8.06□□□□□ -1.12
SYNE1-206ENST00000367253 EBPLQ9BY08 206 aa8.06□□□□□ -1.12
SYNE1-206ENST00000367253 ERVK13-1Q9NX77 482 aa8.06□□□□□ -1.12
SYNE1-206ENST00000367253 KIAA1456Q9P272 454 aa8.06□□□□□ -1.12
SYNE1-206ENST00000367253 PGAP2Q9UHJ9 254 aa8.06□□□□□ -1.12
SYNE1-206ENST00000367253 OTOL1A6NHN0 477 aaPredicted RBP8.05□□□□□ -1.12
SYNE1-206ENST00000367253 TRIM77I1YAP6 450 aa8.05□□□□□ -1.12
SYNE1-206ENST00000367253 CLIC1O00299 241 aa8.05□□□□□ -1.12
SYNE1-206ENST00000367253 HSBP1O75506 76 aa8.05□□□□□ -1.12
SYNE1-206ENST00000367253 STSP08842 583 aa8.05□□□□□ -1.12
SYNE1-206ENST00000367253 H2BFMP0C1H6 154 aa8.05□□□□□ -1.12
SYNE1-206ENST00000367253 PRF1P14222 555 aa8.05□□□□□ -1.12
SYNE1-206ENST00000367253 CELP19835 753 aa8.05□□□□□ -1.12
SYNE1-206ENST00000367253 NTF3P20783 257 aa8.05□□□□□ -1.12
SYNE1-206ENST00000367253 EIF1P41567 113 aaKnown RBP8.05□□□□□ -1.12
SYNE1-206ENST00000367253 BMXP51813 675 aa8.05□□□□□ -1.12
SYNE1-206ENST00000367253 GDF10P55107 478 aa8.05□□□□□ -1.12
SYNE1-206ENST00000367253 SLC14A1Q13336 389 aa8.05□□□□□ -1.12
SYNE1-206ENST00000367253 YIF1BQ5BJH7 314 aa8.05□□□□□ -1.12
SYNE1-206ENST00000367253 COQ5Q5HYK3 327 aa8.05□□□□□ -1.12
SYNE1-206ENST00000367253 TOR2AQ5JU69 321 aa8.05□□□□□ -1.12
SYNE1-206ENST00000367253 DMRTA1Q5VZB9 504 aa8.05□□□□□ -1.12
SYNE1-206ENST00000367253 DESI1Q6ICB0 168 aa8.05□□□□□ -1.12
SYNE1-206ENST00000367253 TMEM25Q86YD3 366 aa8.05□□□□□ -1.12
SYNE1-206ENST00000367253 DND1Q8IYX4 353 aaKnown RBP8.05□□□□□ -1.12
SYNE1-206ENST00000367253 CHPT1Q8WUD6 406 aa8.05□□□□□ -1.12
SYNE1-206ENST00000367253 INTS12Q96CB8 462 aaKnown RBP8.05□□□□□ -1.12
SYNE1-206ENST00000367253 ZNF689Q96CS4 500 aaPredicted RBP8.05□□□□□ -1.12
SYNE1-206ENST00000367253 MS4A4AQ96JQ5 239 aa8.05□□□□□ -1.12
SYNE1-206ENST00000367253 LRR1Q96L50 414 aa8.05□□□□□ -1.12
SYNE1-206ENST00000367253 NTMT1Q9BV86 223 aa8.05□□□□□ -1.12
SYNE1-206ENST00000367253 CDCP1Q9H5V8 836 aa8.05□□□□□ -1.12
SYNE1-206ENST00000367253 SLC39A9Q9NUM3 307 aa8.05□□□□□ -1.12
SYNE1-206ENST00000367253 VPS29Q9UBQ0 182 aa8.05□□□□□ -1.12
SYNE1-206ENST00000367253 GDF2Q9UK05 429 aaPredicted RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms