RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 CAPNS1P04632 268 aa14.62□□□□□ -0.07
NUCKS1-201ENST00000367142 TM4SF4P48230 202 aa14.62□□□□□ -0.07
NUCKS1-201ENST00000367142 P2RX1P51575 399 aa14.62□□□□□ -0.07
NUCKS1-201ENST00000367142 MFGE8Q08431 387 aaPredicted RBP14.62□□□□□ -0.07
NUCKS1-201ENST00000367142 DUSP19Q8WTR2 217 aa14.62□□□□□ -0.07
NUCKS1-201ENST00000367142 ZNF775Q96BV0 537 aaPredicted RBP14.62□□□□□ -0.07
NUCKS1-201ENST00000367142 MOKQ9UQ07 419 aa14.62□□□□□ -0.07
NUCKS1-201ENST00000367142 MMACHCQ9Y4U1 282 aa14.62□□□□□ -0.07
NUCKS1-201ENST00000367142 AOAHP28039 575 aa14.62□□□□□ -0.07
NUCKS1-201ENST00000367142 RPL22L1Q6P5R6 122 aaKnown RBP14.62□□□□□ -0.07
NUCKS1-201ENST00000367142 CNTN4Q8IWV2 1026 aa14.62□□□□□ -0.07
NUCKS1-201ENST00000367142 MFFQ9GZY8 342 aa14.62□□□□□ -0.07
NUCKS1-201ENST00000367142 LHPPQ9H008 270 aa14.62□□□□□ -0.07
NUCKS1-201ENST00000367142 TUBG2Q9NRH3 451 aa14.62□□□□□ -0.07
NUCKS1-201ENST00000367142 C4orf47A7E2U8 309 aa14.62□□□□□ -0.07
NUCKS1-201ENST00000367142 AGPAT2O15120 278 aa14.62□□□□□ -0.07
NUCKS1-201ENST00000367142 F13BP05160 661 aa14.62□□□□□ -0.07
NUCKS1-201ENST00000367142 PAGE3Q5JUK9 113 aa14.62□□□□□ -0.07
NUCKS1-201ENST00000367142 NKAIN2Q5VXU1 208 aa14.62□□□□□ -0.07
NUCKS1-201ENST00000367142 LPCAT3Q6P1A2 487 aa14.62□□□□□ -0.07
NUCKS1-201ENST00000367142 RNF113BQ8IZP6 322 aaKnown RBP14.62□□□□□ -0.07
NUCKS1-201ENST00000367142 HHIPL1Q96JK4 782 aa14.62□□□□□ -0.07
NUCKS1-201ENST00000367142 COQ10AQ96MF6 247 aa14.62□□□□□ -0.07
NUCKS1-201ENST00000367142 ZNF281Q9Y2X9 895 aa14.62□□□□□ -0.07
NUCKS1-201ENST00000367142 TRAV36DV7A0A075B6V5 113 aa14.62□□□□□ -0.07
NUCKS1-201ENST00000367142 ZNF732B4DXR9 585 aa14.62□□□□□ -0.07
NUCKS1-201ENST00000367142 ZNF593O00488 134 aaPredicted RBP14.62□□□□□ -0.07
NUCKS1-201ENST00000367142 GPR171O14626 319 aa14.62□□□□□ -0.07
NUCKS1-201ENST00000367142 ADAM23O75077 832 aa14.62□□□□□ -0.07
NUCKS1-201ENST00000367142 FABP1P07148 127 aa14.62□□□□□ -0.07
NUCKS1-201ENST00000367142 TFPTP0C1Z6 253 aa14.62□□□□□ -0.07
NUCKS1-201ENST00000367142 NPBWR1P48145 328 aa14.62□□□□□ -0.07
NUCKS1-201ENST00000367142 MFAP5Q13361 173 aa14.62□□□□□ -0.07
NUCKS1-201ENST00000367142 DTWD1Q8N5C7 304 aa14.62□□□□□ -0.07
NUCKS1-201ENST00000367142 DEDD2Q8WXF8 326 aa14.62□□□□□ -0.07
NUCKS1-201ENST00000367142 ZC3HAV1LQ96H79 300 aaKnown RBP14.62□□□□□ -0.07
NUCKS1-201ENST00000367142 SSUH2Q9Y2M2 353 aa14.62□□□□□ -0.07
NUCKS1-201ENST00000367142 XRN1Q8IZH2 1706 aaKnown RBP14.62□□□□□ -0.07
NUCKS1-201ENST00000367142 SPINT2O43291 252 aa14.62□□□□□ -0.07
NUCKS1-201ENST00000367142 CYB561P49447 251 aa14.62□□□□□ -0.07
NUCKS1-201ENST00000367142 EDDM3BP56851 147 aa14.62□□□□□ -0.07
NUCKS1-201ENST00000367142 TNK1Q13470 666 aa14.62□□□□□ -0.07
NUCKS1-201ENST00000367142 MRPL2Q5T653 305 aaKnown RBP14.62□□□□□ -0.07
NUCKS1-201ENST00000367142 SPARTQ8N0X7 666 aa14.62□□□□□ -0.07
NUCKS1-201ENST00000367142 PRKAR1BP31321 381 aa14.61□□□□□ -0.07
NUCKS1-201ENST00000367142 CDK5R2Q13319 367 aa14.61□□□□□ -0.07
NUCKS1-201ENST00000367142 HYAL4Q2M3T9 481 aa14.61□□□□□ -0.07
NUCKS1-201ENST00000367142 B3GNT7Q8NFL0 401 aa14.61□□□□□ -0.07
NUCKS1-201ENST00000367142 HSD17B8Q92506 261 aa14.61□□□□□ -0.07
NUCKS1-201ENST00000367142 LCORQ96JN0 433 aaPredicted RBP14.61□□□□□ -0.07
NUCKS1-201ENST00000367142 OR51E2Q9H255 320 aa14.61□□□□□ -0.07
NUCKS1-201ENST00000367142 SERINC4A6NH21 518 aa14.61□□□□□ -0.07
NUCKS1-201ENST00000367142 PTGER1P34995 402 aa14.61□□□□□ -0.07
NUCKS1-201ENST00000367142 SLC1A3P43003 542 aa14.61□□□□□ -0.07
NUCKS1-201ENST00000367142 BAXQ07812 192 aa14.61□□□□□ -0.07
NUCKS1-201ENST00000367142 CAMK2BQ13554 666 aa14.61□□□□□ -0.07
NUCKS1-201ENST00000367142 RAB6CQ53S08 254 aa14.61□□□□□ -0.07
NUCKS1-201ENST00000367142 ZNF454Q8N9F8 522 aa14.61□□□□□ -0.07
NUCKS1-201ENST00000367142 RAB6CQ9H0N0 254 aa14.61□□□□□ -0.07
NUCKS1-201ENST00000367142 SELEP16581 610 aa14.61□□□□□ -0.07
NUCKS1-201ENST00000367142 C6orf15Q6UXA7 325 aaPredicted RBP14.61□□□□□ -0.07
NUCKS1-201ENST00000367142 SLC43A2Q8N370 569 aa14.61□□□□□ -0.07
NUCKS1-201ENST00000367142 NANPQ8TBE9 248 aa14.61□□□□□ -0.07
NUCKS1-201ENST00000367142 SAT2Q96F10 170 aaPredicted RBP14.61□□□□□ -0.07
NUCKS1-201ENST00000367142 LUZP4Q9P127 313 aa14.61□□□□□ -0.07
NUCKS1-201ENST00000367142 HCRTR1O43613 425 aa14.61□□□□□ -0.07
NUCKS1-201ENST00000367142 CST5P28325 142 aaPredicted RBP14.61□□□□□ -0.07
NUCKS1-201ENST00000367142 RAC1P63000 192 aa14.61□□□□□ -0.07
NUCKS1-201ENST00000367142 CTSL3PQ5NE16 218 aa14.61□□□□□ -0.07
NUCKS1-201ENST00000367142 ZNF767PQ75MW2 155 aa14.61□□□□□ -0.07
NUCKS1-201ENST00000367142 MCOLN1Q9GZU1 580 aa14.61□□□□□ -0.07
NUCKS1-201ENST00000367142 HAPLN2Q9GZV7 340 aa14.61□□□□□ -0.07
NUCKS1-201ENST00000367142 WASH6PQ9NQA3 447 aa14.61□□□□□ -0.07
NUCKS1-201ENST00000367142 TMED7-TICAM2A0A0A6YYA0 188 aa14.61□□□□□ -0.07
NUCKS1-201ENST00000367142 G3V3Y1 287 aa14.61□□□□□ -0.07
NUCKS1-201ENST00000367142 K7EQM0 130 aa14.61□□□□□ -0.07
NUCKS1-201ENST00000367142 HSPB6O14558 160 aa14.61□□□□□ -0.07
NUCKS1-201ENST00000367142 SULT1B1O43704 296 aa14.61□□□□□ -0.07
NUCKS1-201ENST00000367142 OPRD1P41143 372 aa14.61□□□□□ -0.07
NUCKS1-201ENST00000367142 FXNQ16595 210 aa14.61□□□□□ -0.07
NUCKS1-201ENST00000367142 C14orf28Q4W4Y0 310 aa14.61□□□□□ -0.07
NUCKS1-201ENST00000367142 ZNF789Q5FWF6 425 aa14.61□□□□□ -0.07
NUCKS1-201ENST00000367142 TANGO2Q6ICL3 276 aa14.61□□□□□ -0.07
NUCKS1-201ENST00000367142 ZNF813Q6ZN06 617 aa14.61□□□□□ -0.07
NUCKS1-201ENST00000367142 NOXA1Q86UR1 476 aa14.61□□□□□ -0.07
NUCKS1-201ENST00000367142 GLB1L2Q8IW92 636 aa14.61□□□□□ -0.07
NUCKS1-201ENST00000367142 OR7G1Q8NGA0 311 aa14.61□□□□□ -0.07
NUCKS1-201ENST00000367142 SEMA6CQ9H3T2 930 aa14.61□□□□□ -0.07
NUCKS1-201ENST00000367142 TMED7Q9Y3B3 224 aa14.61□□□□□ -0.07
NUCKS1-201ENST00000367142 COL2A1P02458 1487 aaPredicted RBP14.61□□□□□ -0.07
NUCKS1-201ENST00000367142 CRYM-AS1A6NIL9 109 aa14.6□□□□□ -0.07
NUCKS1-201ENST00000367142 UTS2O95399 124 aa14.6□□□□□ -0.07
NUCKS1-201ENST00000367142 RAB40ALP0C0E4 278 aa14.6□□□□□ -0.07
NUCKS1-201ENST00000367142 RAB13P51153 203 aa14.6□□□□□ -0.07
NUCKS1-201ENST00000367142 PAPD4Q6PIY7 484 aaKnown RBP14.6□□□□□ -0.07
NUCKS1-201ENST00000367142 RAB40AQ8WXH6 277 aa14.6□□□□□ -0.07
NUCKS1-201ENST00000367142 CTRCQ99895 268 aa14.6□□□□□ -0.07
NUCKS1-201ENST00000367142 NOX3Q9HBY0 568 aa14.6□□□□□ -0.07
NUCKS1-201ENST00000367142 PRSS16Q9NQE7 514 aa14.6□□□□□ -0.07
NUCKS1-201ENST00000367142 PRAMEF4O60810 478 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms