RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 GPR68Q15743 365 aa6.71□□□□□ -1.34
CLCN3-202ENST00000360642 DCST2Q5T1A1 773 aa6.71□□□□□ -1.34
CLCN3-202ENST00000360642 ARMC4Q5T2S8 1044 aa6.71□□□□□ -1.34
CLCN3-202ENST00000360642 ZCCHC12Q6PEW1 402 aa6.71□□□□□ -1.34
CLCN3-202ENST00000360642 ZNF517Q6ZMY9 492 aaPredicted RBP6.71□□□□□ -1.34
CLCN3-202ENST00000360642 ABHD13Q7L211 337 aa6.71□□□□□ -1.34
CLCN3-202ENST00000360642 RANBP3LQ86VV4 465 aaPredicted RBP6.71□□□□□ -1.34
CLCN3-202ENST00000360642 KLHL36Q8N4N3 616 aa6.71□□□□□ -1.34
CLCN3-202ENST00000360642 CAMKVQ8NCB2 501 aa6.71□□□□□ -1.34
CLCN3-202ENST00000360642 SPRYD4Q8WW59 207 aaPredicted RBP6.71□□□□□ -1.34
CLCN3-202ENST00000360642 SIPA1Q96FS4 1042 aa6.71□□□□□ -1.34
CLCN3-202ENST00000360642 STACQ99469 402 aa6.71□□□□□ -1.34
CLCN3-202ENST00000360642 ATF6BQ99941 703 aa6.71□□□□□ -1.34
CLCN3-202ENST00000360642 ENKD1Q9H0I2 346 aa6.71□□□□□ -1.34
CLCN3-202ENST00000360642 FN3KQ9H479 309 aa6.71□□□□□ -1.34
CLCN3-202ENST00000360642 PPP1R3EQ9H7J1 279 aa6.71□□□□□ -1.34
CLCN3-202ENST00000360642 PLEKHA2Q9HB19 425 aa6.71□□□□□ -1.34
CLCN3-202ENST00000360642 KRCC1Q9NPI7 259 aaPredicted RBP6.71□□□□□ -1.34
CLCN3-202ENST00000360642 ASB6Q9NWX5 421 aa6.71□□□□□ -1.34
CLCN3-202ENST00000360642 CLCA2Q9UQC9 943 aa6.71□□□□□ -1.34
CLCN3-202ENST00000360642 F5P12259 2224 aa6.7□□□□□ -1.34
CLCN3-202ENST00000360642 OR14I1A6ND48 311 aa6.7□□□□□ -1.34
CLCN3-202ENST00000360642 UNC119BA6NIH7 251 aa6.7□□□□□ -1.34
CLCN3-202ENST00000360642 C10orf142B7Z368 130 aa6.7□□□□□ -1.34
CLCN3-202ENST00000360642 GABRPO00591 440 aa6.7□□□□□ -1.34
CLCN3-202ENST00000360642 FMO6PO60774 539 aa6.7□□□□□ -1.34
CLCN3-202ENST00000360642 KLF8O95600 359 aaPredicted RBP6.7□□□□□ -1.34
CLCN3-202ENST00000360642 HLA-DQB1P01920 261 aa6.7□□□□□ -1.34
CLCN3-202ENST00000360642 HLA-DPB1P04440 258 aa6.7□□□□□ -1.34
CLCN3-202ENST00000360642 POLR2CP19387 275 aaPredicted RBP6.7□□□□□ -1.34
CLCN3-202ENST00000360642 MAKP20794 623 aa6.7□□□□□ -1.34
CLCN3-202ENST00000360642 RPS5P46782 204 aaKnown RBP6.7□□□□□ -1.34
CLCN3-202ENST00000360642 CAV3P56539 151 aa6.7□□□□□ -1.34
CLCN3-202ENST00000360642 IFITM2Q01629 132 aa6.7□□□□□ -1.34
CLCN3-202ENST00000360642 HYAL1Q12794 435 aa6.7□□□□□ -1.34
CLCN3-202ENST00000360642 GPR18Q14330 331 aa6.7□□□□□ -1.34
CLCN3-202ENST00000360642 OR1Q1Q15612 314 aa6.7□□□□□ -1.34
CLCN3-202ENST00000360642 PRICKLE4Q2TBC4 344 aa6.7□□□□□ -1.34
CLCN3-202ENST00000360642 MRPL2Q5T653 305 aaKnown RBP6.7□□□□□ -1.34
CLCN3-202ENST00000360642 TMEM91Q6ZNR0 172 aa6.7□□□□□ -1.34
CLCN3-202ENST00000360642 RAB43Q86YS6 212 aa6.7□□□□□ -1.34
CLCN3-202ENST00000360642 RDH10Q8IZV5 341 aa6.7□□□□□ -1.34
CLCN3-202ENST00000360642 HMGB4Q8WW32 186 aa6.7□□□□□ -1.34
CLCN3-202ENST00000360642 ZFPM2Q8WW38 1151 aa6.7□□□□□ -1.34
CLCN3-202ENST00000360642 CTHRC1Q96CG8 243 aa6.7□□□□□ -1.34
CLCN3-202ENST00000360642 ZNF486Q96H40 463 aaPredicted RBP6.7□□□□□ -1.34
CLCN3-202ENST00000360642 SECISBP2Q96T21 854 aaKnown RBP6.7□□□□□ -1.34
CLCN3-202ENST00000360642 S1PR5Q9H228 398 aa6.7□□□□□ -1.34
CLCN3-202ENST00000360642 OR52D1Q9H346 318 aa6.7□□□□□ -1.34
CLCN3-202ENST00000360642 C20orf141Q9NUB4 165 aa6.7□□□□□ -1.34
CLCN3-202ENST00000360642 SIDT1Q9NXL6 827 aaKnown RBP6.7□□□□□ -1.34
CLCN3-202ENST00000360642 COL4A2P08572 1712 aa6.7□□□□□ -1.34
CLCN3-202ENST00000360642 OR6C74A6NCV1 312 aa6.7□□□□□ -1.34
CLCN3-202ENST00000360642 FAM183AA6NL82 134 aa6.7□□□□□ -1.34
CLCN3-202ENST00000360642 H0YGG7 62 aa6.7□□□□□ -1.34
CLCN3-202ENST00000360642 PEX12O00623 359 aa6.7□□□□□ -1.34
CLCN3-202ENST00000360642 PLA2G10O15496 165 aa6.7□□□□□ -1.34
CLCN3-202ENST00000360642 FGF17O60258 216 aa6.7□□□□□ -1.34
CLCN3-202ENST00000360642 LDB3O75112 727 aa6.7□□□□□ -1.34
CLCN3-202ENST00000360642 GKN3PP0CG01 181 aa6.7□□□□□ -1.34
CLCN3-202ENST00000360642 CELP19835 753 aa6.7□□□□□ -1.34
CLCN3-202ENST00000360642 ZNF10P21506 573 aaPredicted RBP6.7□□□□□ -1.34
CLCN3-202ENST00000360642 CSF2RBP32927 897 aa6.7□□□□□ -1.34
CLCN3-202ENST00000360642 ACSL1P33121 698 aa6.7□□□□□ -1.34
CLCN3-202ENST00000360642 NR4A2P43354 598 aa6.7□□□□□ -1.34
CLCN3-202ENST00000360642 NKX2-5P52952 324 aaPredicted RBP6.7□□□□□ -1.34
CLCN3-202ENST00000360642 SRP54P61011 504 aaKnown RBP6.7□□□□□ -1.34
CLCN3-202ENST00000360642 ARF3P61204 181 aaPredicted RBP6.7□□□□□ -1.34
CLCN3-202ENST00000360642 PPP3R1P63098 170 aa6.7□□□□□ -1.34
CLCN3-202ENST00000360642 RIN1Q13671 783 aa6.7□□□□□ -1.34
CLCN3-202ENST00000360642 CSRP2Q16527 193 aa6.7□□□□□ -1.34
CLCN3-202ENST00000360642 ALG11Q2TAA5 492 aa6.7□□□□□ -1.34
CLCN3-202ENST00000360642 ZNF791Q3KP31 576 aaPredicted RBP6.7□□□□□ -1.34
CLCN3-202ENST00000360642 MANEAQ5SRI9 462 aa6.7□□□□□ -1.34
CLCN3-202ENST00000360642 FAM69AQ5T7M9 428 aa6.7□□□□□ -1.34
CLCN3-202ENST00000360642 NIPAL3Q6P499 406 aa6.7□□□□□ -1.34
CLCN3-202ENST00000360642 METAP1DQ6UB28 335 aaPredicted RBP6.7□□□□□ -1.34
CLCN3-202ENST00000360642 TMPRSS11FQ6ZWK6 438 aa6.7□□□□□ -1.34
CLCN3-202ENST00000360642 CXXC5Q7LFL8 322 aaKnown RBP6.7□□□□□ -1.34
CLCN3-202ENST00000360642 PRSS41Q7RTY9 318 aa6.7□□□□□ -1.34
CLCN3-202ENST00000360642 GID4Q8IVV7 300 aa6.7□□□□□ -1.34
CLCN3-202ENST00000360642 TMEFF1Q8IYR6 380 aa6.7□□□□□ -1.34
CLCN3-202ENST00000360642 LNX2Q8N448 690 aa6.7□□□□□ -1.34
CLCN3-202ENST00000360642 CDRT4Q8N9R6 151 aa6.7□□□□□ -1.34
CLCN3-202ENST00000360642 PFN4Q8NHR9 129 aa6.7□□□□□ -1.34
CLCN3-202ENST00000360642 TMEM239Q8WW34 195 aa6.7□□□□□ -1.34
CLCN3-202ENST00000360642 FAM3CQ92520 227 aa6.7□□□□□ -1.34
CLCN3-202ENST00000360642 SENP5Q96HI0 755 aaPredicted RBP6.7□□□□□ -1.34
CLCN3-202ENST00000360642 ST6GAL2Q96JF0 529 aa6.7□□□□□ -1.34
CLCN3-202ENST00000360642 TMED9Q9BVK6 235 aa6.7□□□□□ -1.34
CLCN3-202ENST00000360642 HDHD5Q9BXW7 423 aa6.7□□□□□ -1.34
CLCN3-202ENST00000360642 SLC22A4Q9H015 551 aa6.7□□□□□ -1.34
CLCN3-202ENST00000360642 ISG20L2Q9H9L3 353 aaKnown RBP6.7□□□□□ -1.34
CLCN3-202ENST00000360642 CACYBPQ9HB71 228 aaKnown RBP6.7□□□□□ -1.34
CLCN3-202ENST00000360642 NEK6Q9HC98 313 aa6.7□□□□□ -1.34
CLCN3-202ENST00000360642 NCKAP1Q9Y2A7 1128 aa6.7□□□□□ -1.34
CLCN3-202ENST00000360642 MEIOCA2RUB1 952 aa6.69□□□□□ -1.34
CLCN3-202ENST00000360642 CASKO14936 926 aa6.69□□□□□ -1.34
CLCN3-202ENST00000360642 TMCC2O75069 709 aa6.69□□□□□ -1.34
CLCN3-202ENST00000360642 GPR75O95800 540 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms