RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 MRPL22Q9NWU5 206 aaKnown RBP12.51□□□□□ -0.41
CCDC144A-203ENST00000360495 PPP5D1E7EU14 171 aa12.51□□□□□ -0.41
CCDC144A-203ENST00000360495 CFIP05156 583 aa12.51□□□□□ -0.41
CCDC144A-203ENST00000360495 NFYBP25208 207 aa12.51□□□□□ -0.41
CCDC144A-203ENST00000360495 MRPL21Q7Z2W9 205 aaKnown RBP12.51□□□□□ -0.41
CCDC144A-203ENST00000360495 PIANPQ8IYJ0 282 aa12.51□□□□□ -0.41
CCDC144A-203ENST00000360495 SEMA6DQ8NFY4 1073 aa12.51□□□□□ -0.41
CCDC144A-203ENST00000360495 OR5L2Q8NGL0 311 aa12.51□□□□□ -0.41
CCDC144A-203ENST00000360495 OR13C2Q8NGS9 318 aa12.51□□□□□ -0.41
CCDC144A-203ENST00000360495 C11orf84Q9BUA3 381 aaPredicted RBP12.51□□□□□ -0.41
CCDC144A-203ENST00000360495 SLC25A32Q9H2D1 315 aa12.51□□□□□ -0.41
CCDC144A-203ENST00000360495 EXOSC3Q9NQT5 275 aaKnown RBP12.51□□□□□ -0.41
CCDC144A-203ENST00000360495 SLC2A4RGQ9NR83 387 aa12.51□□□□□ -0.41
CCDC144A-203ENST00000360495 H3BML4 177 aa12.51□□□□□ -0.41
CCDC144A-203ENST00000360495 HOXC11O43248 304 aaPredicted RBP12.51□□□□□ -0.41
CCDC144A-203ENST00000360495 STC2O76061 302 aa12.51□□□□□ -0.41
CCDC144A-203ENST00000360495 OPRD1P41143 372 aa12.51□□□□□ -0.41
CCDC144A-203ENST00000360495 HBG1P69891 147 aa12.51□□□□□ -0.41
CCDC144A-203ENST00000360495 HBG2P69892 147 aa12.51□□□□□ -0.41
CCDC144A-203ENST00000360495 CDC20Q12834 499 aa12.51□□□□□ -0.41
CCDC144A-203ENST00000360495 SERINC5Q86VE9 423 aa12.51□□□□□ -0.41
CCDC144A-203ENST00000360495 OR56B1Q8NGI3 324 aa12.51□□□□□ -0.41
CCDC144A-203ENST00000360495 OR9A4Q8NGU2 314 aa12.51□□□□□ -0.41
CCDC144A-203ENST00000360495 DIO2Q92813 273 aa12.51□□□□□ -0.41
CCDC144A-203ENST00000360495 ZIC5Q96T25 663 aa12.51□□□□□ -0.41
CCDC144A-203ENST00000360495 IL17CQ9P0M4 197 aa12.51□□□□□ -0.41
CCDC144A-203ENST00000360495 LRP5LA4QPB2 252 aa12.5□□□□□ -0.41
CCDC144A-203ENST00000360495 TMEM212A6NML5 194 aa12.5□□□□□ -0.41
CCDC144A-203ENST00000360495 PLSCR1O15162 318 aa12.5□□□□□ -0.41
CCDC144A-203ENST00000360495 DBX2Q6ZNG2 339 aa12.5□□□□□ -0.41
CCDC144A-203ENST00000360495 SLC25A46Q96AG3 418 aa12.5□□□□□ -0.41
CCDC144A-203ENST00000360495 KLHDC7BQ96G42 594 aa12.5□□□□□ -0.41
CCDC144A-203ENST00000360495 OR7D2Q96RA2 312 aa12.5□□□□□ -0.41
CCDC144A-203ENST00000360495 POFUT1Q9H488 388 aa12.5□□□□□ -0.41
CCDC144A-203ENST00000360495 ANKRD19PQ9H560 264 aa12.5□□□□□ -0.41
CCDC144A-203ENST00000360495 CLEC2DQ9UHP7 191 aa12.5□□□□□ -0.41
CCDC144A-203ENST00000360495 SLC35A3Q9Y2D2 325 aa12.5□□□□□ -0.41
CCDC144A-203ENST00000360495 ETV7Q9Y603 341 aa12.5□□□□□ -0.41
CCDC144A-203ENST00000360495 ZFP92A6NM28 416 aa12.5□□□□□ -0.41
CCDC144A-203ENST00000360495 AANATQ16613 207 aa12.5□□□□□ -0.41
CCDC144A-203ENST00000360495 Q499Y3 187 aa12.5□□□□□ -0.41
CCDC144A-203ENST00000360495 ZMAT1Q5H9K5 638 aa12.5□□□□□ -0.41
CCDC144A-203ENST00000360495 TMEM31Q5JXX7 168 aa12.5□□□□□ -0.41
CCDC144A-203ENST00000360495 DPPA4Q7L190 304 aa12.5□□□□□ -0.41
CCDC144A-203ENST00000360495 PTRH1Q86Y79 214 aaKnown RBP12.5□□□□□ -0.41
CCDC144A-203ENST00000360495 APCDD1Q8J025 514 aa12.5□□□□□ -0.41
CCDC144A-203ENST00000360495 C15orf54Q8N8G6 183 aa12.5□□□□□ -0.41
CCDC144A-203ENST00000360495 ZNF680Q8NEM1 530 aa12.5□□□□□ -0.41
CCDC144A-203ENST00000360495 OR5AR1Q8NGP9 310 aa12.5□□□□□ -0.41
CCDC144A-203ENST00000360495 BRI3BPQ8WY22 251 aa12.5□□□□□ -0.41
CCDC144A-203ENST00000360495 SPHK2Q9NRA0 654 aa12.5□□□□□ -0.41
CCDC144A-203ENST00000360495 PLEK2Q9NYT0 353 aa12.5□□□□□ -0.41
CCDC144A-203ENST00000360495 SLCO3A1Q9UIG8 710 aa12.5□□□□□ -0.41
CCDC144A-203ENST00000360495 ACTL7AQ9Y615 435 aa12.5□□□□□ -0.41
CCDC144A-203ENST00000360495 AKR7A2O43488 359 aa12.5□□□□□ -0.41
CCDC144A-203ENST00000360495 TGOLN2O43493 480 aa12.5□□□□□ -0.41
CCDC144A-203ENST00000360495 TACR3P29371 465 aa12.5□□□□□ -0.41
CCDC144A-203ENST00000360495 XCR1P46094 333 aa12.5□□□□□ -0.41
CCDC144A-203ENST00000360495 GP2P55259 537 aaKnown RBP12.5□□□□□ -0.41
CCDC144A-203ENST00000360495 EOGTQ5NDL2 527 aa12.5□□□□□ -0.41
CCDC144A-203ENST00000360495 LPCAT3Q6P1A2 487 aa12.5□□□□□ -0.41
CCDC144A-203ENST00000360495 CDH26Q8IXH8 852 aa12.5□□□□□ -0.41
CCDC144A-203ENST00000360495 TMEM217Q8N7C4 229 aa12.5□□□□□ -0.41
CCDC144A-203ENST00000360495 MR1Q95460 341 aa12.5□□□□□ -0.41
CCDC144A-203ENST00000360495 SLC25A21Q9BQT8 299 aaPredicted RBP12.5□□□□□ -0.41
CCDC144A-203ENST00000360495 PARP12Q9H0J9 701 aaKnown RBP12.5□□□□□ -0.41
CCDC144A-203ENST00000360495 SPACA1Q9HBV2 294 aa12.5□□□□□ -0.41
CCDC144A-203ENST00000360495 OR2T1O43869 369 aa12.5□□□□□ -0.41
CCDC144A-203ENST00000360495 IRF2P14316 349 aa12.5□□□□□ -0.41
CCDC144A-203ENST00000360495 SNTB1Q13884 538 aaKnown RBP12.5□□□□□ -0.41
CCDC144A-203ENST00000360495 PRSS45Q7RTY3 260 aa12.5□□□□□ -0.41
CCDC144A-203ENST00000360495 ARFGAP1Q8N6T3 406 aa12.5□□□□□ -0.41
CCDC144A-203ENST00000360495 RTP3Q9BQQ7 232 aa12.5□□□□□ -0.41
CCDC144A-203ENST00000360495 SYT11Q9BT88 431 aa12.5□□□□□ -0.41
CCDC144A-203ENST00000360495 LMF2Q9BU23 707 aaKnown RBP12.5□□□□□ -0.41
CCDC144A-203ENST00000360495 SLCO5A1Q9H2Y9 848 aa12.5□□□□□ -0.41
CCDC144A-203ENST00000360495 TMEM231Q9H6L2 316 aa12.5□□□□□ -0.41
CCDC144A-203ENST00000360495 RNF167Q9H6Y7 350 aa12.5□□□□□ -0.41
CCDC144A-203ENST00000360495 FKRPQ9H9S5 495 aa12.5□□□□□ -0.41
CCDC144A-203ENST00000360495 MRC1P22897 1456 aa12.5□□□□□ -0.41
CCDC144A-203ENST00000360495 GON4LQ3T8J9 2241 aa12.5□□□□□ -0.41
CCDC144A-203ENST00000360495 A0A0U1RQS6 177 aa12.49□□□□□ -0.41
CCDC144A-203ENST00000360495 A0A1W2PP55 124 aa12.49□□□□□ -0.41
CCDC144A-203ENST00000360495 OR5K4A6NMS3 321 aa12.49□□□□□ -0.41
CCDC144A-203ENST00000360495 UMAD1C9J7I0 102 aa12.49□□□□□ -0.41
CCDC144A-203ENST00000360495 CCSO14618 274 aa12.49□□□□□ -0.41
CCDC144A-203ENST00000360495 KCNK5O95279 499 aa12.49□□□□□ -0.41
CCDC144A-203ENST00000360495 CPNE6O95741 557 aa12.49□□□□□ -0.41
CCDC144A-203ENST00000360495 RAB11AP62491 216 aa12.49□□□□□ -0.41
CCDC144A-203ENST00000360495 UBE2IP63279 158 aaKnown RBP12.49□□□□□ -0.41
CCDC144A-203ENST00000360495 BAXQ07812 192 aa12.49□□□□□ -0.41
CCDC144A-203ENST00000360495 HNF4GQ14541 408 aa12.49□□□□□ -0.41
CCDC144A-203ENST00000360495 RAB30Q15771 203 aa12.49□□□□□ -0.41
CCDC144A-203ENST00000360495 VAMP3Q15836 100 aa12.49□□□□□ -0.41
CCDC144A-203ENST00000360495 NXNL2Q5VZ03 156 aa12.49□□□□□ -0.41
CCDC144A-203ENST00000360495 LCTLQ6UWM7 567 aa12.49□□□□□ -0.41
CCDC144A-203ENST00000360495 BCDIN3DQ7Z5W3 292 aaKnown RBP12.49□□□□□ -0.41
CCDC144A-203ENST00000360495 GRASPQ7Z6J2 395 aaPredicted RBP12.49□□□□□ -0.41
CCDC144A-203ENST00000360495 CLRN3Q8NCR9 226 aa12.49□□□□□ -0.41
CCDC144A-203ENST00000360495 TMEM106AQ96A25 262 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms