RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 FAM131AQ6UXB0 335 aa12.69□□□□□ -0.38
CSNK1E-201ENST00000359867 ZNF620Q6ZNG0 422 aa12.69□□□□□ -0.38
CSNK1E-201ENST00000359867 TMPRSS12Q86WS5 348 aa12.69□□□□□ -0.38
CSNK1E-201ENST00000359867 STT3BQ8TCJ2 826 aa12.69□□□□□ -0.38
CSNK1E-201ENST00000359867 PTPMT1Q8WUK0 201 aaPredicted RBP12.69□□□□□ -0.38
CSNK1E-201ENST00000359867 ADAMTS14Q8WXS8 1223 aa12.69□□□□□ -0.38
CSNK1E-201ENST00000359867 CNOT9Q92600 299 aaKnown RBP12.69□□□□□ -0.38
CSNK1E-201ENST00000359867 MR1Q95460 341 aa12.69□□□□□ -0.38
CSNK1E-201ENST00000359867 TSLPQ969D9 159 aa12.69□□□□□ -0.38
CSNK1E-201ENST00000359867 TMCO6Q96DC7 493 aa12.69□□□□□ -0.38
CSNK1E-201ENST00000359867 SENP5Q96HI0 755 aaPredicted RBP12.69□□□□□ -0.38
CSNK1E-201ENST00000359867 SLC46A1Q96NT5 459 aa12.69□□□□□ -0.38
CSNK1E-201ENST00000359867 FYTTD1Q96QD9 318 aaKnown RBP12.69□□□□□ -0.38
CSNK1E-201ENST00000359867 MRPS18AQ9NVS2 196 aaKnown RBP12.69□□□□□ -0.38
CSNK1E-201ENST00000359867 DNAJB12Q9NXW2 375 aaKnown RBP12.69□□□□□ -0.38
CSNK1E-201ENST00000359867 NUFIP1Q9UHK0 495 aaKnown RBP12.69□□□□□ -0.38
CSNK1E-201ENST00000359867 YARS2Q9Y2Z4 477 aaKnown RBP12.69□□□□□ -0.38
CSNK1E-201ENST00000359867 OR10H1Q9Y4A9 318 aa12.69□□□□□ -0.38
CSNK1E-201ENST00000359867 CDH10Q9Y6N8 788 aa12.69□□□□□ -0.38
CSNK1E-201ENST00000359867 IRGMA1A4Y4 181 aa12.69□□□□□ -0.38
CSNK1E-201ENST00000359867 MEIOCA2RUB1 952 aa12.69□□□□□ -0.38
CSNK1E-201ENST00000359867 PIP5K1CO60331 668 aa12.69□□□□□ -0.38
CSNK1E-201ENST00000359867 NTN1O95631 604 aa12.69□□□□□ -0.38
CSNK1E-201ENST00000359867 SCG5P05408 212 aa12.69□□□□□ -0.38
CSNK1E-201ENST00000359867 RFX3P48380 749 aa12.69□□□□□ -0.38
CSNK1E-201ENST00000359867 SPHARQ15513 63 aa12.69□□□□□ -0.38
CSNK1E-201ENST00000359867 TMEM44Q2T9K0 475 aa12.69□□□□□ -0.38
CSNK1E-201ENST00000359867 MEX3DQ86XN8 651 aaKnown RBP12.69□□□□□ -0.38
CSNK1E-201ENST00000359867 CDK20Q8IZL9 346 aa12.69□□□□□ -0.38
CSNK1E-201ENST00000359867 BCORP1Q8N888 145 aa12.69□□□□□ -0.38
CSNK1E-201ENST00000359867 OR9Q1Q8NGQ5 310 aa12.69□□□□□ -0.38
CSNK1E-201ENST00000359867 LRR1Q96L50 414 aa12.69□□□□□ -0.38
CSNK1E-201ENST00000359867 ZNF582Q96NG8 517 aaPredicted RBP12.69□□□□□ -0.38
CSNK1E-201ENST00000359867 MESP1Q9BRJ9 268 aa12.69□□□□□ -0.38
CSNK1E-201ENST00000359867 RANGRFQ9HD47 186 aaPredicted RBP12.69□□□□□ -0.38
CSNK1E-201ENST00000359867 ABCB9Q9NP78 766 aa12.69□□□□□ -0.38
CSNK1E-201ENST00000359867 LSM2Q9Y333 95 aaKnown RBP12.69□□□□□ -0.38
CSNK1E-201ENST00000359867 A0A075B6Q4 140 aa12.68□□□□□ -0.38
CSNK1E-201ENST00000359867 FAM25AB3EWG3 89 aa12.68□□□□□ -0.38
CSNK1E-201ENST00000359867 FAM25CB3EWG5 89 aa12.68□□□□□ -0.38
CSNK1E-201ENST00000359867 FAM25GB3EWG6 89 aa12.68□□□□□ -0.38
CSNK1E-201ENST00000359867 CHP2O43745 196 aa12.68□□□□□ -0.38
CSNK1E-201ENST00000359867 HMGN1P05114 100 aa12.68□□□□□ -0.38
CSNK1E-201ENST00000359867 ACAA2P42765 397 aaKnown RBP12.68□□□□□ -0.38
CSNK1E-201ENST00000359867 CRYBB2P43320 205 aa12.68□□□□□ -0.38
CSNK1E-201ENST00000359867 PPICP45877 212 aa12.68□□□□□ -0.38
CSNK1E-201ENST00000359867 GPR4P46093 362 aa12.68□□□□□ -0.38
CSNK1E-201ENST00000359867 GABREP78334 506 aa12.68□□□□□ -0.38
CSNK1E-201ENST00000359867 KLHL22Q53GT1 634 aa12.68□□□□□ -0.38
CSNK1E-201ENST00000359867 TIPARPQ7Z3E1 657 aaKnown RBP12.68□□□□□ -0.38
CSNK1E-201ENST00000359867 BRIX1Q8TDN6 353 aaKnown RBP12.68□□□□□ -0.38
CSNK1E-201ENST00000359867 KCNN2Q9H2S1 579 aa12.68□□□□□ -0.38
CSNK1E-201ENST00000359867 MKL2Q9ULH7 1088 aa12.68□□□□□ -0.38
CSNK1E-201ENST00000359867 MED31Q9Y3C7 131 aa12.68□□□□□ -0.38
CSNK1E-201ENST00000359867 A0A0B4J2E0 115 aa12.68□□□□□ -0.38
CSNK1E-201ENST00000359867 A0A1B0GX12 115 aa12.68□□□□□ -0.38
CSNK1E-201ENST00000359867 UNC119BA6NIH7 251 aa12.68□□□□□ -0.38
CSNK1E-201ENST00000359867 PRODHO43272 600 aa12.68□□□□□ -0.38
CSNK1E-201ENST00000359867 KLK3P07288 261 aaPredicted RBP12.68□□□□□ -0.38
CSNK1E-201ENST00000359867 RBM34P42696 430 aaKnown RBP12.68□□□□□ -0.38
CSNK1E-201ENST00000359867 CBX5P45973 191 aa12.68□□□□□ -0.38
CSNK1E-201ENST00000359867 RORCP51449 518 aa12.68□□□□□ -0.38
CSNK1E-201ENST00000359867 CTBP2P56545 445 aa12.68□□□□□ -0.38
CSNK1E-201ENST00000359867 SLC37A1P57057 533 aa12.68□□□□□ -0.38
CSNK1E-201ENST00000359867 PSPHP78330 225 aa12.68□□□□□ -0.38
CSNK1E-201ENST00000359867 HNRNPA0Q13151 305 aaKnown RBP12.68□□□□□ -0.38
CSNK1E-201ENST00000359867 CLVS2Q5SYC1 327 aa12.68□□□□□ -0.38
CSNK1E-201ENST00000359867 C22orf42Q6IC83 251 aa12.68□□□□□ -0.38
CSNK1E-201ENST00000359867 RPL13AP3Q6NVV1 102 aa12.68□□□□□ -0.38
CSNK1E-201ENST00000359867 TMPRSS11FQ6ZWK6 438 aa12.68□□□□□ -0.38
CSNK1E-201ENST00000359867 GLCCI1Q86VQ1 547 aa12.68□□□□□ -0.38
CSNK1E-201ENST00000359867 ZNF614Q8N883 585 aa12.68□□□□□ -0.38
CSNK1E-201ENST00000359867 OR4M1Q8NGD0 313 aa12.68□□□□□ -0.38
CSNK1E-201ENST00000359867 LRRC20Q8TCA0 184 aa12.68□□□□□ -0.38
CSNK1E-201ENST00000359867 UBASH3BQ8TF42 649 aa12.68□□□□□ -0.38
CSNK1E-201ENST00000359867 MARC2Q969Z3 335 aa12.68□□□□□ -0.38
CSNK1E-201ENST00000359867 DDA1Q9BW61 102 aa12.68□□□□□ -0.38
CSNK1E-201ENST00000359867 SRRQ9GZT4 340 aa12.68□□□□□ -0.38
CSNK1E-201ENST00000359867 MKKSQ9NPJ1 570 aaPredicted RBP12.68□□□□□ -0.38
CSNK1E-201ENST00000359867 PNO1Q9NRX1 252 aaKnown RBP12.68□□□□□ -0.38
CSNK1E-201ENST00000359867 AKAP13Q12802 2813 aa12.68□□□□□ -0.38
CSNK1E-201ENST00000359867 NUP210LQ5VU65 1888 aa12.67□□□□□ -0.38
CSNK1E-201ENST00000359867 ZGLP1P0C6A0 271 aa12.67□□□□□ -0.38
CSNK1E-201ENST00000359867 PSMA1P25786 263 aaKnown RBP12.67□□□□□ -0.38
CSNK1E-201ENST00000359867 CAV3P56539 151 aa12.67□□□□□ -0.38
CSNK1E-201ENST00000359867 CD83Q01151 205 aa12.67□□□□□ -0.38
CSNK1E-201ENST00000359867 RUNX1T1Q06455 604 aa12.67□□□□□ -0.38
CSNK1E-201ENST00000359867 ELAVL1Q15717 326 aaKnown RBP12.67□□□□□ -0.38
CSNK1E-201ENST00000359867 ESCO2Q56NI9 601 aa12.67□□□□□ -0.38
CSNK1E-201ENST00000359867 TMEM164Q5U3C3 297 aa12.67□□□□□ -0.38
CSNK1E-201ENST00000359867 WDR88Q6ZMY6 472 aa12.67□□□□□ -0.38
CSNK1E-201ENST00000359867 ART5Q96L15 291 aa12.67□□□□□ -0.38
CSNK1E-201ENST00000359867 VN1R1Q9GZP7 353 aa12.67□□□□□ -0.38
CSNK1E-201ENST00000359867 NUP50Q9UKX7 468 aa12.67□□□□□ -0.38
CSNK1E-201ENST00000359867 DIMT1Q9UNQ2 313 aaKnown RBP12.67□□□□□ -0.38
CSNK1E-201ENST00000359867 CMAHPQ9Y471 501 aa12.67□□□□□ -0.38
CSNK1E-201ENST00000359867 TCRBV16S1A1N1A0A5B0 115 aa12.67□□□□□ -0.38
CSNK1E-201ENST00000359867 SERINC4A6NH21 518 aa12.67□□□□□ -0.38
CSNK1E-201ENST00000359867 KDM4EB2RXH2 506 aaPredicted RBP12.67□□□□□ -0.38
CSNK1E-201ENST00000359867 LINC01387J3KSC0 135 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms