RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 SLC31A2O15432 143 aa14.95□□□□□ -0.02
COL18A1-203ENST00000359759 TRAF3IP2O43734 574 aaPredicted RBP14.95□□□□□ -0.02
COL18A1-203ENST00000359759 SLC10A3P09131 477 aa14.95□□□□□ -0.02
COL18A1-203ENST00000359759 PXNP49023 591 aaPredicted RBP14.95□□□□□ -0.02
COL18A1-203ENST00000359759 RUNX2Q13950 521 aa14.95□□□□□ -0.02
COL18A1-203ENST00000359759 HAPLN2Q9GZV7 340 aa14.95□□□□□ -0.02
COL18A1-203ENST00000359759 LINC00597Q9H2U6 94 aa14.95□□□□□ -0.02
COL18A1-203ENST00000359759 DYNLRB1Q9NP97 96 aa14.95□□□□□ -0.02
COL18A1-203ENST00000359759 VEZF1Q14119 521 aa14.95□□□□□ -0.02
COL18A1-203ENST00000359759 MPEG1Q2M385 716 aa14.95□□□□□ -0.02
COL18A1-203ENST00000359759 BATF2Q8N1L9 274 aa14.95□□□□□ -0.02
COL18A1-203ENST00000359759 OR5L1Q8NGL2 311 aa14.95□□□□□ -0.02
COL18A1-203ENST00000359759 C2CD4CQ8TF44 421 aa14.95□□□□□ -0.02
COL18A1-203ENST00000359759 NKX3-1Q99801 234 aaPredicted RBP14.95□□□□□ -0.02
COL18A1-203ENST00000359759 SLC6A20Q9NP91 592 aa14.95□□□□□ -0.02
COL18A1-203ENST00000359759 KIF1AQ12756 1690 aa14.95□□□□□ -0.02
COL18A1-203ENST00000359759 KCNK2O95069 426 aa14.95□□□□□ -0.02
COL18A1-203ENST00000359759 HBQ1P09105 142 aa14.95□□□□□ -0.02
COL18A1-203ENST00000359759 RAP2BP61225 183 aa14.95□□□□□ -0.02
COL18A1-203ENST00000359759 ARL16Q0P5N6 197 aa14.95□□□□□ -0.02
COL18A1-203ENST00000359759 SLC6A19Q695T7 634 aa14.95□□□□□ -0.02
COL18A1-203ENST00000359759 GPR26Q8NDV2 337 aa14.95□□□□□ -0.02
COL18A1-203ENST00000359759 ADAMTS4O75173 837 aa14.95□□□□□ -0.02
COL18A1-203ENST00000359759 IGHG1P01857 330 aa14.95□□□□□ -0.02
COL18A1-203ENST00000359759 MTCP1P56278 107 aa14.95□□□□□ -0.02
COL18A1-203ENST00000359759 TBPL2Q6SJ96 375 aa14.95□□□□□ -0.02
COL18A1-203ENST00000359759 ZC3H3Q8IXZ2 948 aaKnown RBP14.95□□□□□ -0.02
COL18A1-203ENST00000359759 ST8SIA2Q92186 375 aa14.95□□□□□ -0.02
COL18A1-203ENST00000359759 MUL1Q969V5 352 aa14.95□□□□□ -0.02
COL18A1-203ENST00000359759 ZNF416Q9BWM5 594 aa14.95□□□□□ -0.02
COL18A1-203ENST00000359759 GON7Q9BXV9 100 aa14.95□□□□□ -0.02
COL18A1-203ENST00000359759 GORASP2Q9H8Y8 452 aa14.95□□□□□ -0.02
COL18A1-203ENST00000359759 PIAS3Q9Y6X2 628 aa14.95□□□□□ -0.02
COL18A1-203ENST00000359759 ZFP92A6NM28 416 aa14.95□□□□□ -0.02
COL18A1-203ENST00000359759 OR2T1O43869 369 aa14.95□□□□□ -0.02
COL18A1-203ENST00000359759 F2RL1P55085 397 aa14.95□□□□□ -0.02
COL18A1-203ENST00000359759 P2RX3P56373 397 aa14.95□□□□□ -0.02
COL18A1-203ENST00000359759 CAMK2DQ13557 499 aa14.95□□□□□ -0.02
COL18A1-203ENST00000359759 STT3BQ8TCJ2 826 aa14.95□□□□□ -0.02
COL18A1-203ENST00000359759 FAM103A1Q9BTL3 118 aaKnown RBP14.95□□□□□ -0.02
COL18A1-203ENST00000359759 SELENOIQ9C0D9 397 aa14.95□□□□□ -0.02
COL18A1-203ENST00000359759 ARHGAP33O14559 1287 aa14.95□□□□□ -0.02
COL18A1-203ENST00000359759 CYB5BO43169 146 aa14.95□□□□□ -0.02
COL18A1-203ENST00000359759 XRCC3O43542 346 aa14.95□□□□□ -0.02
COL18A1-203ENST00000359759 SHC1P29353 583 aa14.95□□□□□ -0.02
COL18A1-203ENST00000359759 CPOXP36551 454 aa14.95□□□□□ -0.02
COL18A1-203ENST00000359759 MAT1AQ00266 395 aaKnown RBP14.95□□□□□ -0.02
COL18A1-203ENST00000359759 TINAGL1Q9GZM7 467 aaPredicted RBP14.95□□□□□ -0.02
COL18A1-203ENST00000359759 OR52A5Q9H2C5 316 aa14.95□□□□□ -0.02
COL18A1-203ENST00000359759 TUBB1Q9H4B7 451 aa14.95□□□□□ -0.02
COL18A1-203ENST00000359759 ZNF701M0R085 212 aaPredicted RBP14.94□□□□□ -0.02
COL18A1-203ENST00000359759 OVCH1Q7RTY7 1134 aa14.94□□□□□ -0.02
COL18A1-203ENST00000359759 BCDIN3DQ7Z5W3 292 aaKnown RBP14.94□□□□□ -0.02
COL18A1-203ENST00000359759 OR4N2Q8NGD1 307 aa14.94□□□□□ -0.02
COL18A1-203ENST00000359759 BADQ92934 168 aa14.94□□□□□ -0.02
COL18A1-203ENST00000359759 SLC41A2Q96JW4 573 aa14.94□□□□□ -0.02
COL18A1-203ENST00000359759 RNF170Q96K19 258 aa14.94□□□□□ -0.02
COL18A1-203ENST00000359759 CNOT2Q9NZN8 540 aaKnown RBP14.94□□□□□ -0.02
COL18A1-203ENST00000359759 NFAT5O94916 1531 aa14.94□□□□□ -0.02
COL18A1-203ENST00000359759 PRPH2P23942 346 aa14.94□□□□□ -0.02
COL18A1-203ENST00000359759 NUDT1P36639 197 aa14.94□□□□□ -0.02
COL18A1-203ENST00000359759 HTR4Q13639 388 aa14.94□□□□□ -0.02
COL18A1-203ENST00000359759 CLVS2Q5SYC1 327 aa14.94□□□□□ -0.02
COL18A1-203ENST00000359759 WBP2NLQ6ICG8 309 aa14.94□□□□□ -0.02
COL18A1-203ENST00000359759 SMAP2Q8WU79 429 aaPredicted RBP14.94□□□□□ -0.02
COL18A1-203ENST00000359759 RAB3CQ96E17 227 aa14.94□□□□□ -0.02
COL18A1-203ENST00000359759 POFUT1Q9H488 388 aa14.94□□□□□ -0.02
COL18A1-203ENST00000359759 SUSD5O60279 629 aa14.94□□□□□ -0.02
COL18A1-203ENST00000359759 CLDN17P56750 224 aa14.94□□□□□ -0.02
COL18A1-203ENST00000359759 ESCO2Q56NI9 601 aa14.94□□□□□ -0.02
COL18A1-203ENST00000359759 PLAC9Q5JTB6 97 aa14.94□□□□□ -0.02
COL18A1-203ENST00000359759 CGB2Q6NT52 195 aa14.94□□□□□ -0.02
COL18A1-203ENST00000359759 RBMS3Q6XE24 437 aaKnown RBP14.94□□□□□ -0.02
COL18A1-203ENST00000359759 CHCHD4Q8N4Q1 142 aa14.94□□□□□ -0.02
COL18A1-203ENST00000359759 FIBINQ8TAL6 211 aa14.94□□□□□ -0.02
COL18A1-203ENST00000359759 SMIM14Q96QK8 99 aa14.94□□□□□ -0.02
COL18A1-203ENST00000359759 NOX4Q9NPH5 578 aa14.94□□□□□ -0.02
COL18A1-203ENST00000359759 IL1AP01583 271 aa14.94□□□□□ -0.02
COL18A1-203ENST00000359759 FGF4P08620 206 aa14.94□□□□□ -0.02
COL18A1-203ENST00000359759 CHRNB4P30926 498 aa14.94□□□□□ -0.02
COL18A1-203ENST00000359759 SLC36A2Q495M3 483 aa14.94□□□□□ -0.02
COL18A1-203ENST00000359759 HACD4Q5VWC8 232 aa14.94□□□□□ -0.02
COL18A1-203ENST00000359759 RTL6Q6ICC9 239 aa14.94□□□□□ -0.02
COL18A1-203ENST00000359759 REEP6Q96HR9 211 aa14.94□□□□□ -0.02
COL18A1-203ENST00000359759 C16orf70Q9BSU1 422 aa14.94□□□□□ -0.02
COL18A1-203ENST00000359759 TMEM59Q9BXS4 323 aa14.94□□□□□ -0.02
COL18A1-203ENST00000359759 ULBP2Q9BZM5 246 aa14.94□□□□□ -0.02
COL18A1-203ENST00000359759 GPR45Q9Y5Y3 372 aa14.94□□□□□ -0.02
COL18A1-203ENST00000359759 PHF1O43189 567 aaPredicted RBP14.94□□□□□ -0.02
COL18A1-203ENST00000359759 TIMM8AO60220 97 aaPredicted RBP14.94□□□□□ -0.02
COL18A1-203ENST00000359759 HNRNPA2B1P22626 353 aaKnown RBP14.94□□□□□ -0.02
COL18A1-203ENST00000359759 GPR176Q14439 515 aa14.94□□□□□ -0.02
COL18A1-203ENST00000359759 UGDHO60701 494 aa14.93□□□□□ -0.02
COL18A1-203ENST00000359759 RAB40ALP0C0E4 278 aa14.93□□□□□ -0.02
COL18A1-203ENST00000359759 ZNF684Q5T5D7 378 aa14.93□□□□□ -0.02
COL18A1-203ENST00000359759 MRPL2Q5T653 305 aaKnown RBP14.93□□□□□ -0.02
COL18A1-203ENST00000359759 RAB40AQ8WXH6 277 aa14.93□□□□□ -0.02
COL18A1-203ENST00000359759 ZMAT3Q9HA38 289 aaKnown RBP14.93□□□□□ -0.02
COL18A1-203ENST00000359759 TMEM131LA2VDJ0 1609 aa14.93□□□□□ -0.02
COL18A1-203ENST00000359759 RNF212BA8MTL3 300 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms