RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 HOXB13Q92826 284 aaPredicted RBP4.65□□□□□ -1.66
ATXN3-202ENST00000359366 ADIPOR1Q96A54 375 aa4.65□□□□□ -1.66
ATXN3-202ENST00000359366 HCAR1Q9BXC0 346 aa4.65□□□□□ -1.66
ATXN3-202ENST00000359366 CHRNA10Q9GZZ6 450 aa4.65□□□□□ -1.66
ATXN3-202ENST00000359366 CLN6Q9NWW5 311 aa4.65□□□□□ -1.66
ATXN3-202ENST00000359366 SEMA5BQ9P283 1151 aa4.65□□□□□ -1.66
ATXN3-202ENST00000359366 CYB5R1Q9UHQ9 305 aa4.65□□□□□ -1.66
ATXN3-202ENST00000359366 CHTOPQ9Y3Y2 248 aaKnown RBP4.65□□□□□ -1.66
ATXN3-202ENST00000359366 A0A0B4J2E0 115 aa4.65□□□□□ -1.67
ATXN3-202ENST00000359366 A0A1B0GX12 115 aa4.65□□□□□ -1.67
ATXN3-202ENST00000359366 SERINC4A6NH21 518 aa4.65□□□□□ -1.67
ATXN3-202ENST00000359366 CENPXA8MT69 81 aa4.65□□□□□ -1.67
ATXN3-202ENST00000359366 NPIPB9F8W1W9 429 aa4.65□□□□□ -1.67
ATXN3-202ENST00000359366 M0R082 166 aa4.65□□□□□ -1.67
ATXN3-202ENST00000359366 SOCS6O14544 535 aa4.65□□□□□ -1.67
ATXN3-202ENST00000359366 CDC40O60508 579 aaKnown RBP eCLIP4.65□□□□□ -1.67
ATXN3-202ENST00000359366 GMDSO60547 372 aa4.65□□□□□ -1.67
ATXN3-202ENST00000359366 CER1O95813 267 aa4.65□□□□□ -1.67
ATXN3-202ENST00000359366 GYPBP06028 91 aa4.65□□□□□ -1.67
ATXN3-202ENST00000359366 CDK1P06493 297 aa4.65□□□□□ -1.67
ATXN3-202ENST00000359366 CLUP10909 449 aa4.65□□□□□ -1.67
ATXN3-202ENST00000359366 TGM1P22735 817 aa4.65□□□□□ -1.67
ATXN3-202ENST00000359366 DCKP27707 260 aa4.65□□□□□ -1.67
ATXN3-202ENST00000359366 AVPR2P30518 371 aa4.65□□□□□ -1.67
ATXN3-202ENST00000359366 SOX3P41225 446 aa4.65□□□□□ -1.67
ATXN3-202ENST00000359366 PCP4P48539 62 aa4.65□□□□□ -1.67
ATXN3-202ENST00000359366 ATP12AP54707 1039 aa4.65□□□□□ -1.67
ATXN3-202ENST00000359366 COPZ1P61923 177 aa4.65□□□□□ -1.67
ATXN3-202ENST00000359366 ZNF91Q05481 1191 aa4.65□□□□□ -1.67
ATXN3-202ENST00000359366 CRYZQ08257 329 aaKnown RBP4.65□□□□□ -1.67
ATXN3-202ENST00000359366 FOXC1Q12948 553 aa4.65□□□□□ -1.67
ATXN3-202ENST00000359366 TSPAN31Q12999 210 aa4.65□□□□□ -1.67
ATXN3-202ENST00000359366 FGFBP1Q14512 234 aa4.65□□□□□ -1.67
ATXN3-202ENST00000359366 EBPQ15125 230 aaKnown RBP4.65□□□□□ -1.67
ATXN3-202ENST00000359366 MED22Q15528 200 aa4.65□□□□□ -1.67
ATXN3-202ENST00000359366 ELAVL1Q15717 326 aaKnown RBP4.65□□□□□ -1.67
ATXN3-202ENST00000359366 DECR1Q16698 335 aa4.65□□□□□ -1.67
ATXN3-202ENST00000359366 SYT14P1Q58G82 188 aa4.65□□□□□ -1.67
ATXN3-202ENST00000359366 TEX30Q5JUR7 227 aa4.65□□□□□ -1.67
ATXN3-202ENST00000359366 SLC23A3Q6PIS1 610 aa4.65□□□□□ -1.67
ATXN3-202ENST00000359366 PLEKHG7Q6ZR37 379 aa4.65□□□□□ -1.67
ATXN3-202ENST00000359366 UTS2BQ765I0 119 aa4.65□□□□□ -1.67
ATXN3-202ENST00000359366 PPP1R3BQ86XI6 285 aa4.65□□□□□ -1.67
ATXN3-202ENST00000359366 SLITRK4Q8IW52 837 aa4.65□□□□□ -1.67
ATXN3-202ENST00000359366 DEPDC4Q8N2C3 294 aa4.65□□□□□ -1.67
ATXN3-202ENST00000359366 PSD4Q8NDX1 1056 aa4.65□□□□□ -1.67
ATXN3-202ENST00000359366 OR52N1Q8NH53 320 aa4.65□□□□□ -1.67
ATXN3-202ENST00000359366 WDR36Q8NI36 951 aaKnown RBP4.65□□□□□ -1.67
ATXN3-202ENST00000359366 GNPDA2Q8TDQ7 276 aa4.65□□□□□ -1.67
ATXN3-202ENST00000359366 ADAMTS18Q8TE60 1221 aa4.65□□□□□ -1.67
ATXN3-202ENST00000359366 FKBP10Q96AY3 582 aa4.65□□□□□ -1.67
ATXN3-202ENST00000359366 BPIFA2Q96DR5 249 aa4.65□□□□□ -1.67
ATXN3-202ENST00000359366 ZNF582Q96NG8 517 aaPredicted RBP4.65□□□□□ -1.67
ATXN3-202ENST00000359366 OR1F2PQ96R84 312 aa4.65□□□□□ -1.67
ATXN3-202ENST00000359366 NPAS1Q99742 590 aa4.65□□□□□ -1.67
ATXN3-202ENST00000359366 TTTY10Q9BZA0 68 aa4.65□□□□□ -1.67
ATXN3-202ENST00000359366 WWTR1Q9GZV5 400 aa4.65□□□□□ -1.67
ATXN3-202ENST00000359366 SACM1LQ9NTJ5 587 aa4.65□□□□□ -1.67
ATXN3-202ENST00000359366 SIDT1Q9NXL6 827 aaKnown RBP4.65□□□□□ -1.67
ATXN3-202ENST00000359366 ZNF223Q9UK11 482 aaPredicted RBP4.65□□□□□ -1.67
ATXN3-202ENST00000359366 ZNF221Q9UK13 617 aa4.65□□□□□ -1.67
ATXN3-202ENST00000359366 FBXL4Q9UKA2 621 aa4.65□□□□□ -1.67
ATXN3-202ENST00000359366 MMACHCQ9Y4U1 282 aa4.65□□□□□ -1.67
ATXN3-202ENST00000359366 HSPE1-MOB4S4R3N1 261 aa4.65□□□□□ -1.67
ATXN3-202ENST00000359366 LOC100506127A0A0U1RQW1 187 aa4.64□□□□□ -1.67
ATXN3-202ENST00000359366 UNC119BA6NIH7 251 aa4.64□□□□□ -1.67
ATXN3-202ENST00000359366 ACOD1A6NK06 481 aa4.64□□□□□ -1.67
ATXN3-202ENST00000359366 GTPBP1O00178 669 aaKnown RBP4.64□□□□□ -1.67
ATXN3-202ENST00000359366 MEN1O00255 615 aa4.64□□□□□ -1.67
ATXN3-202ENST00000359366 KLF4O43474 513 aa4.64□□□□□ -1.67
ATXN3-202ENST00000359366 HCRTR2O43614 444 aa4.64□□□□□ -1.67
ATXN3-202ENST00000359366 SOX30O94993 753 aa4.64□□□□□ -1.67
ATXN3-202ENST00000359366 NUDT14O95848 222 aa4.64□□□□□ -1.67
ATXN3-202ENST00000359366 AK1P00568 194 aa4.64□□□□□ -1.67
ATXN3-202ENST00000359366 ADORA3P0DMS8 318 aa4.64□□□□□ -1.67
ATXN3-202ENST00000359366 CD36P16671 472 aa4.64□□□□□ -1.67
ATXN3-202ENST00000359366 TMEM11P17152 192 aa4.64□□□□□ -1.67
ATXN3-202ENST00000359366 JUNBP17275 347 aaPredicted RBP4.64□□□□□ -1.67
ATXN3-202ENST00000359366 MST1P26927 711 aa4.64□□□□□ -1.67
ATXN3-202ENST00000359366 ITPKBP27987 946 aa4.64□□□□□ -1.67
ATXN3-202ENST00000359366 ABCD3P28288 659 aa4.64□□□□□ -1.67
ATXN3-202ENST00000359366 ETV5P41161 510 aa4.64□□□□□ -1.67
ATXN3-202ENST00000359366 FBXW4P57775 412 aa4.64□□□□□ -1.67
ATXN3-202ENST00000359366 RPS18P62269 152 aaKnown RBP4.64□□□□□ -1.67
ATXN3-202ENST00000359366 DCDP81605 110 aaKnown RBP4.64□□□□□ -1.67
ATXN3-202ENST00000359366 CDK5Q00535 292 aa4.64□□□□□ -1.67
ATXN3-202ENST00000359366 CD300CQ08708 224 aa4.64□□□□□ -1.67
ATXN3-202ENST00000359366 PLCXD2Q0VAA5 305 aa4.64□□□□□ -1.67
ATXN3-202ENST00000359366 ZNF141Q15928 474 aa4.64□□□□□ -1.67
ATXN3-202ENST00000359366 PEAR1Q5VY43 1037 aaPredicted RBP4.64□□□□□ -1.67
ATXN3-202ENST00000359366 HLA-DQA1Q5Y7H0 255 aa4.64□□□□□ -1.67
ATXN3-202ENST00000359366 SLC6A19Q695T7 634 aa4.64□□□□□ -1.67
ATXN3-202ENST00000359366 SLC27A4Q6P1M0 643 aa4.64□□□□□ -1.67
ATXN3-202ENST00000359366 ZNF620Q6ZNG0 422 aa4.64□□□□□ -1.67
ATXN3-202ENST00000359366 PRSS48Q7RTY5 328 aa4.64□□□□□ -1.67
ATXN3-202ENST00000359366 ANKRD37Q7Z713 158 aa4.64□□□□□ -1.67
ATXN3-202ENST00000359366 KMT5CQ86Y97 462 aa4.64□□□□□ -1.67
ATXN3-202ENST00000359366 SLC34A3Q8N130 599 aa4.64□□□□□ -1.67
ATXN3-202ENST00000359366 ZFP41Q8N8Y5 198 aa4.64□□□□□ -1.67
ATXN3-202ENST00000359366 FAM181AQ8N9Y4 354 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms