RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 GMEB2Q9UKD1 530 aa10.28□□□□□ -0.76
SSU72-202ENST00000359060 PCOLCE2Q9UKZ9 415 aa10.28□□□□□ -0.76
SSU72-202ENST00000359060 ATXN7L1Q9ULK2 861 aaPredicted RBP10.28□□□□□ -0.76
SSU72-202ENST00000359060 ALG5Q9Y673 324 aa10.28□□□□□ -0.76
SSU72-202ENST00000359060 ANKRD61A6NGH8 418 aa10.28□□□□□ -0.76
SSU72-202ENST00000359060 HCRTR1O43613 425 aa10.28□□□□□ -0.76
SSU72-202ENST00000359060 TOXO94900 526 aa10.28□□□□□ -0.76
SSU72-202ENST00000359060 HOXC4P09017 264 aaPredicted RBP10.28□□□□□ -0.76
SSU72-202ENST00000359060 OR2T7P0C7T2 308 aa10.28□□□□□ -0.76
SSU72-202ENST00000359060 PGCP20142 388 aa10.28□□□□□ -0.76
SSU72-202ENST00000359060 AP3S2P59780 193 aa10.28□□□□□ -0.76
SSU72-202ENST00000359060 SNRPNP63162 240 aaKnown RBP10.28□□□□□ -0.76
SSU72-202ENST00000359060 DGAT2L6Q6ZPD8 337 aa10.28□□□□□ -0.76
SSU72-202ENST00000359060 NOXA1Q86UR1 476 aa10.28□□□□□ -0.76
SSU72-202ENST00000359060 SHISA5Q8N114 240 aa10.28□□□□□ -0.76
SSU72-202ENST00000359060 OR2T27Q8NH04 317 aa10.28□□□□□ -0.76
SSU72-202ENST00000359060 AHCTF1Q8WYP5 2266 aa10.28□□□□□ -0.76
SSU72-202ENST00000359060 POLE3Q9NRF9 147 aa10.28□□□□□ -0.76
SSU72-202ENST00000359060 ACOXLQ9NUZ1 547 aa10.28□□□□□ -0.76
SSU72-202ENST00000359060 TBC1D24Q9ULP9 559 aa10.28□□□□□ -0.76
SSU72-202ENST00000359060 UTS2O95399 124 aa10.28□□□□□ -0.76
SSU72-202ENST00000359060 VWA2Q5GFL6 755 aa10.28□□□□□ -0.76
SSU72-202ENST00000359060 TMEM69Q5SWH9 247 aa10.28□□□□□ -0.76
SSU72-202ENST00000359060 MIXL1Q9H2W2 232 aa10.28□□□□□ -0.76
SSU72-202ENST00000359060 EFCAB7A8K855 629 aa10.27□□□□□ -0.76
SSU72-202ENST00000359060 B4DXG7 233 aa10.27□□□□□ -0.76
SSU72-202ENST00000359060 NOS1APO75052 506 aaPredicted RBP10.27□□□□□ -0.76
SSU72-202ENST00000359060 TP53P04637 393 aaPredicted RBP10.27□□□□□ -0.76
SSU72-202ENST00000359060 CFIP05156 583 aa10.27□□□□□ -0.76
SSU72-202ENST00000359060 MSL3P1P0C860 447 aa10.27□□□□□ -0.76
SSU72-202ENST00000359060 GIFP27352 417 aa10.27□□□□□ -0.76
SSU72-202ENST00000359060 FGF9P31371 208 aaPredicted RBP10.27□□□□□ -0.76
SSU72-202ENST00000359060 PSG6Q00889 435 aa10.27□□□□□ -0.76
SSU72-202ENST00000359060 ASAH1Q13510 395 aa10.27□□□□□ -0.76
SSU72-202ENST00000359060 HYAL4Q2M3T9 481 aa10.27□□□□□ -0.76
SSU72-202ENST00000359060 TMPRSS11FQ6ZWK6 438 aa10.27□□□□□ -0.76
SSU72-202ENST00000359060 DPY19L4Q7Z388 723 aa10.27□□□□□ -0.76
SSU72-202ENST00000359060 OR5AK2Q8NH90 309 aa10.27□□□□□ -0.76
SSU72-202ENST00000359060 ANKRD9Q96BM1 317 aaPredicted RBP10.27□□□□□ -0.76
SSU72-202ENST00000359060 SARGQ9BW04 601 aa10.27□□□□□ -0.76
SSU72-202ENST00000359060 FOXQ1Q9C009 403 aa10.27□□□□□ -0.76
SSU72-202ENST00000359060 NXF5Q9H1B4 397 aaKnown RBP10.27□□□□□ -0.76
SSU72-202ENST00000359060 INIPQ9NRY2 104 aa10.27□□□□□ -0.76
SSU72-202ENST00000359060 A0A0B4J2E0 115 aa10.27□□□□□ -0.77
SSU72-202ENST00000359060 A0A1B0GX12 115 aa10.27□□□□□ -0.77
SSU72-202ENST00000359060 TLCD2A6NGC4 264 aa10.27□□□□□ -0.77
SSU72-202ENST00000359060 TNFSF14O43557 240 aa10.27□□□□□ -0.77
SSU72-202ENST00000359060 TRIM3O75382 744 aaPredicted RBP10.27□□□□□ -0.77
SSU72-202ENST00000359060 CAPZBP47756 277 aa10.27□□□□□ -0.77
SSU72-202ENST00000359060 SRP9P49458 86 aaKnown RBP10.27□□□□□ -0.77
SSU72-202ENST00000359060 ZNF79Q15937 498 aa10.27□□□□□ -0.77
SSU72-202ENST00000359060 JAGN1Q8N5M9 183 aa10.27□□□□□ -0.77
SSU72-202ENST00000359060 PTP4A1Q93096 173 aa10.27□□□□□ -0.77
SSU72-202ENST00000359060 ATF6BQ99941 703 aa10.27□□□□□ -0.77
SSU72-202ENST00000359060 LMF2Q9BU23 707 aaKnown RBP10.27□□□□□ -0.77
SSU72-202ENST00000359060 GALNT9Q9HCQ5 603 aa10.27□□□□□ -0.77
SSU72-202ENST00000359060 ZNF304Q9HCX3 659 aa10.27□□□□□ -0.77
SSU72-202ENST00000359060 NOX4Q9NPH5 578 aa10.27□□□□□ -0.77
SSU72-202ENST00000359060 MEPEQ9NQ76 525 aaPredicted RBP10.27□□□□□ -0.77
SSU72-202ENST00000359060 FLRT3Q9NZU0 649 aa10.27□□□□□ -0.77
SSU72-202ENST00000359060 EIF3KQ9UBQ5 218 aaKnown RBP10.27□□□□□ -0.77
SSU72-202ENST00000359060 EPHA6Q9UF33 1036 aa10.27□□□□□ -0.77
SSU72-202ENST00000359060 VDAC3Q9Y277 283 aa10.27□□□□□ -0.77
SSU72-202ENST00000359060 CACNG2Q9Y698 323 aa10.27□□□□□ -0.77
SSU72-202ENST00000359060 V9GYH0 126 aa10.27□□□□□ -0.77
SSU72-202ENST00000359060 UBE2QL1A1L167 161 aa10.27□□□□□ -0.77
SSU72-202ENST00000359060 NSA2O95478 260 aaKnown RBP10.27□□□□□ -0.77
SSU72-202ENST00000359060 KIR2DL3P43628 341 aa10.27□□□□□ -0.77
SSU72-202ENST00000359060 CCR5P51681 352 aa10.27□□□□□ -0.77
SSU72-202ENST00000359060 HSD17B7P56937 341 aa10.27□□□□□ -0.77
SSU72-202ENST00000359060 GFOD2Q3B7J2 385 aa10.27□□□□□ -0.77
SSU72-202ENST00000359060 PHF19Q5T6S3 580 aa10.27□□□□□ -0.77
SSU72-202ENST00000359060 SLC25A25Q6KCM7 469 aa10.27□□□□□ -0.77
SSU72-202ENST00000359060 METAP1DQ6UB28 335 aaPredicted RBP10.27□□□□□ -0.77
SSU72-202ENST00000359060 SLC35D2Q76EJ3 337 aa10.27□□□□□ -0.77
SSU72-202ENST00000359060 SLC22A18ASQ8N1D0 253 aa10.27□□□□□ -0.77
SSU72-202ENST00000359060 C17orf47Q8NEP4 570 aa10.27□□□□□ -0.77
SSU72-202ENST00000359060 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.27□□□□□ -0.77
SSU72-202ENST00000359060 SLC7A6Q92536 515 aa10.27□□□□□ -0.77
SSU72-202ENST00000359060 RSPO3Q9BXY4 272 aaPredicted RBP10.27□□□□□ -0.77
SSU72-202ENST00000359060 NXF2Q9GZY0 626 aaKnown RBP10.27□□□□□ -0.77
SSU72-202ENST00000359060 SYT4Q9H2B2 425 aa10.27□□□□□ -0.77
SSU72-202ENST00000359060 SEC61A2Q9H9S3 476 aa10.27□□□□□ -0.77
SSU72-202ENST00000359060 NOTOA8MTQ0 251 aa10.26□□□□□ -0.77
SSU72-202ENST00000359060 OPN1LWP04000 364 aa10.26□□□□□ -0.77
SSU72-202ENST00000359060 HEXBP07686 556 aa10.26□□□□□ -0.77
SSU72-202ENST00000359060 SQSTM1Q13501 440 aa10.26□□□□□ -0.77
SSU72-202ENST00000359060 TDGQ13569 410 aa10.26□□□□□ -0.77
SSU72-202ENST00000359060 SMAD2Q15796 467 aaKnown RBP10.26□□□□□ -0.77
SSU72-202ENST00000359060 LRFN4Q6PJG9 635 aa10.26□□□□□ -0.77
SSU72-202ENST00000359060 LYPD4Q6UWN0 246 aa10.26□□□□□ -0.77
SSU72-202ENST00000359060 PRSS45Q7RTY3 260 aa10.26□□□□□ -0.77
SSU72-202ENST00000359060 ABI3BPQ7Z7G0 1075 aa10.26□□□□□ -0.77
SSU72-202ENST00000359060 TPRA1Q86W33 373 aa10.26□□□□□ -0.77
SSU72-202ENST00000359060 LMF1Q96S06 567 aa10.26□□□□□ -0.77
SSU72-202ENST00000359060 NCDNQ9UBB6 729 aa10.26□□□□□ -0.77
SSU72-202ENST00000359060 KCNE5Q9UJ90 142 aa10.26□□□□□ -0.77
SSU72-202ENST00000359060 PILRAQ9UKJ1 303 aa10.26□□□□□ -0.77
SSU72-202ENST00000359060 DTX4Q9Y2E6 619 aa10.26□□□□□ -0.77
SSU72-202ENST00000359060 IGHV3-20A0A0C4DH32 117 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms