RNA–Protein interactions for RNA: ENST00000358525.8

SLC6A20-202, Transcript of solute carrier family 6 member 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A20, Length 5,423 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20-202ENST00000358525 NEU3Q9UQ49 428 aa13.55□□□□□ -0.24
SLC6A20-202ENST00000358525 PTRH2Q9Y3E5 179 aaKnown RBP13.55□□□□□ -0.24
SLC6A20-202ENST00000358525 FCMRO60667 390 aa13.55□□□□□ -0.24
SLC6A20-202ENST00000358525 CD22P20273 847 aa13.55□□□□□ -0.24
SLC6A20-202ENST00000358525 FIP1L1Q6UN15 594 aaKnown RBP13.55□□□□□ -0.24
SLC6A20-202ENST00000358525 OR52N1Q8NH53 320 aa13.55□□□□□ -0.24
SLC6A20-202ENST00000358525 DUSP19Q8WTR2 217 aa13.55□□□□□ -0.24
SLC6A20-202ENST00000358525 MRPL38Q96DV4 380 aaKnown RBP13.55□□□□□ -0.24
SLC6A20-202ENST00000358525 ALG14Q96F25 216 aa13.55□□□□□ -0.24
SLC6A20-202ENST00000358525 SDF2Q99470 211 aa13.55□□□□□ -0.24
SLC6A20-202ENST00000358525 LYRM4Q9HD34 91 aa13.55□□□□□ -0.24
SLC6A20-202ENST00000358525 NRIP3Q9NQ35 241 aa13.55□□□□□ -0.24
SLC6A20-202ENST00000358525 MAN2C1Q9NTJ4 1040 aa13.55□□□□□ -0.24
SLC6A20-202ENST00000358525 ZNF593O00488 134 aaPredicted RBP13.54□□□□□ -0.24
SLC6A20-202ENST00000358525 HCRTR1O43613 425 aa13.54□□□□□ -0.24
SLC6A20-202ENST00000358525 CTNSO60931 367 aa13.54□□□□□ -0.24
SLC6A20-202ENST00000358525 CXCL12P48061 93 aa13.54□□□□□ -0.24
SLC6A20-202ENST00000358525 HACD4Q5VWC8 232 aa13.54□□□□□ -0.24
SLC6A20-202ENST00000358525 NDUFAF7Q7L592 441 aa13.54□□□□□ -0.24
SLC6A20-202ENST00000358525 ZNF100Q8IYN0 542 aa13.54□□□□□ -0.24
SLC6A20-202ENST00000358525 WASH6PQ9NQA3 447 aa13.54□□□□□ -0.24
SLC6A20-202ENST00000358525 POLHQ9Y253 713 aa13.54□□□□□ -0.24
SLC6A20-202ENST00000358525 SLC2A10O95528 541 aa13.54□□□□□ -0.24
SLC6A20-202ENST00000358525 LIPCP11150 499 aa13.54□□□□□ -0.24
SLC6A20-202ENST00000358525 PPP2CBP62714 309 aa13.54□□□□□ -0.24
SLC6A20-202ENST00000358525 PPP2CAP67775 309 aa13.54□□□□□ -0.24
SLC6A20-202ENST00000358525 AQP6Q13520 282 aa13.54□□□□□ -0.24
SLC6A20-202ENST00000358525 TMEM244Q5VVB8 128 aa13.54□□□□□ -0.24
SLC6A20-202ENST00000358525 LYSMD4Q5XG99 296 aa13.54□□□□□ -0.24
SLC6A20-202ENST00000358525 OR14A16Q8NHC5 309 aa13.54□□□□□ -0.24
SLC6A20-202ENST00000358525 KIAA1143Q96AT1 154 aaPredicted RBP13.54□□□□□ -0.24
SLC6A20-202ENST00000358525 RASD2Q96D21 266 aa13.54□□□□□ -0.24
SLC6A20-202ENST00000358525 ELF4Q99607 663 aaPredicted RBP13.54□□□□□ -0.24
SLC6A20-202ENST00000358525 C6orf106Q9H6K1 298 aaPredicted RBP13.54□□□□□ -0.24
SLC6A20-202ENST00000358525 NRXN2Q9P2S2 1712 aa13.54□□□□□ -0.24
SLC6A20-202ENST00000358525 ZNF831Q5JPB2 1677 aa13.54□□□□□ -0.24
SLC6A20-202ENST00000358525 HTR3BO95264 441 aa13.54□□□□□ -0.24
SLC6A20-202ENST00000358525 ABHD12BQ7Z5M8 362 aaPredicted RBP13.54□□□□□ -0.24
SLC6A20-202ENST00000358525 PXKQ7Z7A4 578 aa13.54□□□□□ -0.24
SLC6A20-202ENST00000358525 PDZD9Q8IXQ8 264 aa13.54□□□□□ -0.24
SLC6A20-202ENST00000358525 GIMAP1Q8WWP7 306 aa13.54□□□□□ -0.24
SLC6A20-202ENST00000358525 LINC00615Q96LM1 132 aaPredicted RBP13.54□□□□□ -0.24
SLC6A20-202ENST00000358525 CDCA4Q9BXL8 241 aa13.54□□□□□ -0.24
SLC6A20-202ENST00000358525 RBFOX1Q9NWB1 397 aaKnown RBP13.54□□□□□ -0.24
SLC6A20-202ENST00000358525 HLA-DMAP28067 261 aa13.54□□□□□ -0.24
SLC6A20-202ENST00000358525 ZNF511Q8NB15 262 aa13.54□□□□□ -0.24
SLC6A20-202ENST00000358525 DYNC2LI1Q8TCX1 351 aa13.54□□□□□ -0.24
SLC6A20-202ENST00000358525 RSC1A1Q92681 617 aa13.54□□□□□ -0.24
SLC6A20-202ENST00000358525 STACQ99469 402 aa13.54□□□□□ -0.24
SLC6A20-202ENST00000358525 SLC6A20Q9NP91 592 aa13.54□□□□□ -0.24
SLC6A20-202ENST00000358525 VSX1Q9NZR4 365 aaPredicted RBP13.54□□□□□ -0.24
SLC6A20-202ENST00000358525 MED16Q9Y2X0 877 aa13.54□□□□□ -0.24
SLC6A20-202ENST00000358525 A3GALT2U3KPV4 340 aa13.54□□□□□ -0.24
SLC6A20-202ENST00000358525 FGF17O60258 216 aa13.54□□□□□ -0.24
SLC6A20-202ENST00000358525 SPDEFO95238 335 aa13.54□□□□□ -0.24
SLC6A20-202ENST00000358525 APOC3P02656 99 aa13.54□□□□□ -0.24
SLC6A20-202ENST00000358525 DCNP07585 359 aaKnown RBP13.54□□□□□ -0.24
SLC6A20-202ENST00000358525 SSTR2P30874 369 aa13.54□□□□□ -0.24
SLC6A20-202ENST00000358525 PER3P56645 1201 aa13.54□□□□□ -0.24
SLC6A20-202ENST00000358525 SHHQ15465 462 aa13.54□□□□□ -0.24
SLC6A20-202ENST00000358525 ARHGAP11BQ3KRB8 267 aa13.54□□□□□ -0.24
SLC6A20-202ENST00000358525 DPY19L4Q7Z388 723 aa13.54□□□□□ -0.24
SLC6A20-202ENST00000358525 FAM26EQ8N5C1 309 aa13.54□□□□□ -0.24
SLC6A20-202ENST00000358525 SNAPC3Q92966 411 aa13.54□□□□□ -0.24
SLC6A20-202ENST00000358525 LCORQ96JN0 433 aaPredicted RBP13.54□□□□□ -0.24
SLC6A20-202ENST00000358525 PHB2Q99623 299 aa13.54□□□□□ -0.24
SLC6A20-202ENST00000358525 CDC6Q99741 560 aa13.54□□□□□ -0.24
SLC6A20-202ENST00000358525 MKRN2Q9H000 416 aaKnown RBP13.54□□□□□ -0.24
SLC6A20-202ENST00000358525 FKBP14Q9NWM8 211 aa13.54□□□□□ -0.24
SLC6A20-202ENST00000358525 C19orf53Q9UNZ5 99 aaPredicted RBP13.54□□□□□ -0.24
SLC6A20-202ENST00000358525 HS3ST3A1Q9Y663 406 aa13.54□□□□□ -0.24
SLC6A20-202ENST00000358525 OR5K3A6NET4 321 aa13.53□□□□□ -0.24
SLC6A20-202ENST00000358525 BCAT2O15382 392 aaPredicted RBP13.53□□□□□ -0.24
SLC6A20-202ENST00000358525 LCATP04180 440 aa13.53□□□□□ -0.24
SLC6A20-202ENST00000358525 CHRNB1P11230 501 aa13.53□□□□□ -0.24
SLC6A20-202ENST00000358525 KIAA0040Q15053 153 aa13.53□□□□□ -0.24
SLC6A20-202ENST00000358525 DHRS4L2Q6PKH6 230 aa13.53□□□□□ -0.24
SLC6A20-202ENST00000358525 DPY19L2P2Q6ZN68 376 aa13.53□□□□□ -0.24
SLC6A20-202ENST00000358525 ANKRD53Q8N9V6 530 aa13.53□□□□□ -0.24
SLC6A20-202ENST00000358525 OSGIN1Q9UJX0 560 aa13.53□□□□□ -0.24
SLC6A20-202ENST00000358525 UQCRC1P31930 480 aa13.53□□□□□ -0.24
SLC6A20-202ENST00000358525 PSPHP78330 225 aa13.53□□□□□ -0.24
SLC6A20-202ENST00000358525 CADM3Q8N126 398 aa13.53□□□□□ -0.24
SLC6A20-202ENST00000358525 ZNF784Q8NCA9 323 aaPredicted RBP13.53□□□□□ -0.24
SLC6A20-202ENST00000358525 YIPF6Q96EC8 236 aa13.53□□□□□ -0.24
SLC6A20-202ENST00000358525 IGLV3-16A0A075B6K0 115 aa13.53□□□□□ -0.24
SLC6A20-202ENST00000358525 TNFRSF10CO14798 259 aa13.53□□□□□ -0.24
SLC6A20-202ENST00000358525 SELENOFO60613 162 aa13.53□□□□□ -0.24
SLC6A20-202ENST00000358525 KNG1P01042 644 aa13.53□□□□□ -0.24
SLC6A20-202ENST00000358525 ASB17Q8WXJ9 295 aa13.53□□□□□ -0.24
SLC6A20-202ENST00000358525 SPTSSAQ969W0 71 aa13.53□□□□□ -0.24
SLC6A20-202ENST00000358525 SLC25A46Q96AG3 418 aa13.53□□□□□ -0.24
SLC6A20-202ENST00000358525 BORCS8Q96FH0 119 aa13.53□□□□□ -0.24
SLC6A20-202ENST00000358525 ST6GALNAC5Q9BVH7 336 aa13.53□□□□□ -0.24
SLC6A20-202ENST00000358525 PBX4Q9BYU1 374 aa13.53□□□□□ -0.24
SLC6A20-202ENST00000358525 NOX4Q9NPH5 578 aa13.53□□□□□ -0.24
SLC6A20-202ENST00000358525 TMEFF2Q9UIK5 374 aaPredicted RBP13.53□□□□□ -0.24
SLC6A20-202ENST00000358525 YARS2Q9Y2Z4 477 aaKnown RBP13.53□□□□□ -0.24
SLC6A20-202ENST00000358525 CORINQ9Y5Q5 1042 aa13.53□□□□□ -0.24
SLC6A20-202ENST00000358525 TMEM129A0AVI4 362 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms