RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 PIGXQ8TBF5 258 aa13.67□□□□□ -0.22
TPM1-206ENST00000358278 BPIFA2Q96DR5 249 aa13.67□□□□□ -0.22
TPM1-206ENST00000358278 TRIB1Q96RU8 372 aa13.67□□□□□ -0.22
TPM1-206ENST00000358278 PRRG4Q9BZD6 226 aa13.67□□□□□ -0.22
TPM1-206ENST00000358278 C20orf141Q9NUB4 165 aa13.67□□□□□ -0.22
TPM1-206ENST00000358278 OSGIN2Q9Y236 505 aa13.67□□□□□ -0.22
TPM1-206ENST00000358278 DNPH1O43598 174 aa13.66□□□□□ -0.22
TPM1-206ENST00000358278 CH25HO95992 272 aa13.66□□□□□ -0.22
TPM1-206ENST00000358278 CBLP22681 906 aa13.66□□□□□ -0.22
TPM1-206ENST00000358278 DNAJA1P31689 397 aaKnown RBP13.66□□□□□ -0.22
TPM1-206ENST00000358278 PTGER4P35408 488 aa13.66□□□□□ -0.22
TPM1-206ENST00000358278 LIMS1P48059 325 aa13.66□□□□□ -0.22
TPM1-206ENST00000358278 ARHGDIAP52565 204 aa13.66□□□□□ -0.22
TPM1-206ENST00000358278 IST1P53990 364 aa13.66□□□□□ -0.22
TPM1-206ENST00000358278 NUP107P57740 925 aa13.66□□□□□ -0.22
TPM1-206ENST00000358278 LSM11P83369 360 aaKnown RBP eCLIP13.66□□□□□ -0.223e-11■■■■□ 21.7
TPM1-206ENST00000358278 MFSD13AQ14CX5 517 aa13.66□□□□□ -0.22
TPM1-206ENST00000358278 ZNF74Q16587 644 aa13.66□□□□□ -0.22
TPM1-206ENST00000358278 ZNF239Q16600 458 aaKnown RBP13.66□□□□□ -0.22
TPM1-206ENST00000358278 ACSF3Q4G176 576 aaPredicted RBP13.66□□□□□ -0.22
TPM1-206ENST00000358278 C1orf185Q5T7R7 199 aa13.66□□□□□ -0.22
TPM1-206ENST00000358278 C3P1Q6ZMU1 363 aa13.66□□□□□ -0.22
TPM1-206ENST00000358278 AMIGO2Q86SJ2 522 aa13.66□□□□□ -0.22
TPM1-206ENST00000358278 DOLPP1Q86YN1 238 aa13.66□□□□□ -0.22
TPM1-206ENST00000358278 SGTBQ96EQ0 304 aa13.66□□□□□ -0.22
TPM1-206ENST00000358278 MOGAT1Q96PD6 335 aa13.66□□□□□ -0.22
TPM1-206ENST00000358278 FUZQ9BT04 418 aa13.66□□□□□ -0.22
TPM1-206ENST00000358278 SEMA6AQ9H2E6 1030 aa13.66□□□□□ -0.22
TPM1-206ENST00000358278 NANSQ9NR45 359 aa13.66□□□□□ -0.22
TPM1-206ENST00000358278 TMEM5Q9Y2B1 443 aa13.66□□□□□ -0.22
TPM1-206ENST00000358278 IGHV3-15A0A0B4J1V0 119 aa13.65□□□□□ -0.22
TPM1-206ENST00000358278 TRGV8A0A0C4DH27 118 aa13.65□□□□□ -0.22
TPM1-206ENST00000358278 SLC22A20A6NK97 555 aa13.65□□□□□ -0.22
TPM1-206ENST00000358278 LRRN3E7EW58 273 aa13.65□□□□□ -0.22
TPM1-206ENST00000358278 EIF1BO60739 113 aaKnown RBP13.65□□□□□ -0.22
TPM1-206ENST00000358278 CCNB2O95067 398 aa13.65□□□□□ -0.22
TPM1-206ENST00000358278 MT-ATP6P00846 226 aa13.65□□□□□ -0.22
TPM1-206ENST00000358278 IGF2P01344 180 aa13.65□□□□□ -0.22
TPM1-206ENST00000358278 BGLAPP02818 100 aa13.65□□□□□ -0.22
TPM1-206ENST00000358278 SAGP10523 405 aaPredicted RBP13.65□□□□□ -0.22
TPM1-206ENST00000358278 ENPP1P22413 925 aa13.65□□□□□ -0.22
TPM1-206ENST00000358278 IFNGR2P38484 337 aa13.65□□□□□ -0.22
TPM1-206ENST00000358278 GPR4P46093 362 aa13.65□□□□□ -0.22
TPM1-206ENST00000358278 PRKCDQ05655 676 aa13.65□□□□□ -0.22
TPM1-206ENST00000358278 LAPTM4AQ15012 233 aa13.65□□□□□ -0.22
TPM1-206ENST00000358278 PLXDC2Q6UX71 529 aa13.65□□□□□ -0.22
TPM1-206ENST00000358278 RPTNQ6XPR3 784 aa13.65□□□□□ -0.22
TPM1-206ENST00000358278 MAMDC2Q7Z304 686 aaPredicted RBP13.65□□□□□ -0.22
TPM1-206ENST00000358278 P4HA3Q7Z4N8 544 aa13.65□□□□□ -0.22
TPM1-206ENST00000358278 LINC00471Q8N535 108 aa13.65□□□□□ -0.22
TPM1-206ENST00000358278 OR4C15Q8NGM1 316 aa13.65□□□□□ -0.22
TPM1-206ENST00000358278 OR6S1Q8NH40 331 aa13.65□□□□□ -0.22
TPM1-206ENST00000358278 FNDC9Q8TBE3 224 aa13.65□□□□□ -0.22
TPM1-206ENST00000358278 FAM46AQ96IP4 442 aaKnown RBP13.65□□□□□ -0.22
TPM1-206ENST00000358278 ASPNQ9BXN1 380 aa13.65□□□□□ -0.22
TPM1-206ENST00000358278 FKRPQ9H9S5 495 aa13.65□□□□□ -0.22
TPM1-206ENST00000358278 HTR3EA5X5Y0 456 aa13.64□□□□□ -0.23
TPM1-206ENST00000358278 FTCDNL1E5RQL4 147 aa13.64□□□□□ -0.23
TPM1-206ENST00000358278 AKR7A3O95154 331 aa13.64□□□□□ -0.23
TPM1-206ENST00000358278 BAG2O95816 211 aa13.64□□□□□ -0.23
TPM1-206ENST00000358278 HIST1H2ABP04908 130 aa13.64□□□□□ -0.23
TPM1-206ENST00000358278 HOXD4P09016 255 aaPredicted RBP13.64□□□□□ -0.23
TPM1-206ENST00000358278 FCGR2AP12318 317 aa13.64□□□□□ -0.23
TPM1-206ENST00000358278 ZNF23P17027 643 aa13.64□□□□□ -0.23
TPM1-206ENST00000358278 GRPRP30550 384 aa13.64□□□□□ -0.23
TPM1-206ENST00000358278 CTBP2P56545 445 aa13.64□□□□□ -0.23
TPM1-206ENST00000358278 RCN1Q15293 331 aa13.64□□□□□ -0.23
TPM1-206ENST00000358278 MICAQ29983 383 aa13.64□□□□□ -0.23
TPM1-206ENST00000358278 HMBOX1Q6NT76 420 aa13.64□□□□□ -0.23
TPM1-206ENST00000358278 PAQR6Q6TCH4 344 aa13.64□□□□□ -0.23
TPM1-206ENST00000358278 B3GNT6Q6ZMB0 384 aa13.64□□□□□ -0.23
TPM1-206ENST00000358278 HIST3H2AQ7L7L0 130 aa13.64□□□□□ -0.23
TPM1-206ENST00000358278 MEX3DQ86XN8 651 aaKnown RBP13.64□□□□□ -0.23
TPM1-206ENST00000358278 OR9Q2Q8NGE9 314 aa13.64□□□□□ -0.23
TPM1-206ENST00000358278 HIST1H2ACQ93077 130 aa13.64□□□□□ -0.23
TPM1-206ENST00000358278 CENPNQ96H22 339 aaPredicted RBP13.64□□□□□ -0.23
TPM1-206ENST00000358278 UCN2Q96RP3 112 aa13.64□□□□□ -0.23
TPM1-206ENST00000358278 PKP2Q99959 881 aa13.64□□□□□ -0.23
TPM1-206ENST00000358278 NAA11Q9BSU3 229 aaPredicted RBP13.64□□□□□ -0.23
TPM1-206ENST00000358278 NTN4Q9HB63 628 aa13.64□□□□□ -0.23
TPM1-206ENST00000358278 ZNF175Q9Y473 711 aa13.64□□□□□ -0.23
TPM1-206ENST00000358278 CORINQ9Y5Q5 1042 aa13.64□□□□□ -0.23
TPM1-206ENST00000358278 M0R082 166 aa13.64□□□□□ -0.23
TPM1-206ENST00000358278 OR7A10O76100 309 aa13.64□□□□□ -0.23
TPM1-206ENST00000358278 GNLYP22749 145 aa13.64□□□□□ -0.23
TPM1-206ENST00000358278 CA7P43166 264 aa13.64□□□□□ -0.23
TPM1-206ENST00000358278 UQCRFS1P47985 274 aa13.64□□□□□ -0.23
TPM1-206ENST00000358278 LTBQ06643 244 aa13.64□□□□□ -0.23
TPM1-206ENST00000358278 OTUD3Q5T2D3 398 aaPredicted RBP13.64□□□□□ -0.23
TPM1-206ENST00000358278 NSUN5P2Q63ZY6 315 aa13.64□□□□□ -0.23
TPM1-206ENST00000358278 FCRLAQ7L513 359 aa13.64□□□□□ -0.23
TPM1-206ENST00000358278 SLC46A3Q7Z3Q1 461 aa13.64□□□□□ -0.23
TPM1-206ENST00000358278 TMEM179BQ7Z7N9 219 aa13.64□□□□□ -0.23
TPM1-206ENST00000358278 ADGRE4PQ86SQ3 457 aa13.64□□□□□ -0.23
TPM1-206ENST00000358278 ICA1LQ8NDH6 482 aa13.64□□□□□ -0.23
TPM1-206ENST00000358278 OR10G2Q8NGC3 310 aa13.64□□□□□ -0.23
TPM1-206ENST00000358278 ZNF417Q8TAU3 575 aa13.64□□□□□ -0.23
TPM1-206ENST00000358278 GIPC3Q8TF64 312 aa13.64□□□□□ -0.23
TPM1-206ENST00000358278 ROBO4Q8WZ75 1007 aa13.64□□□□□ -0.23
TPM1-206ENST00000358278 ZNF587Q96SQ5 575 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms