RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 MMP15P51511 669 aa11.64□□□□□ -0.55
RTFDC1-202ENST00000357348 SIM1P81133 766 aaPredicted RBP11.64□□□□□ -0.55
RTFDC1-202ENST00000357348 ID2Q02363 134 aa11.64□□□□□ -0.55
RTFDC1-202ENST00000357348 ERV3-1Q14264 604 aa11.64□□□□□ -0.55
RTFDC1-202ENST00000357348 KLHL12Q53G59 568 aa11.64□□□□□ -0.55
RTFDC1-202ENST00000357348 CLEC12AQ5QGZ9 265 aa11.64□□□□□ -0.55
RTFDC1-202ENST00000357348 GPAT4Q86UL3 456 aa11.64□□□□□ -0.55
RTFDC1-202ENST00000357348 COMMD7Q86VX2 200 aa11.64□□□□□ -0.55
RTFDC1-202ENST00000357348 GRAMD2AQ8IUY3 354 aa11.64□□□□□ -0.55
RTFDC1-202ENST00000357348 GID4Q8IVV7 300 aa11.64□□□□□ -0.55
RTFDC1-202ENST00000357348 D2HGDHQ8N465 521 aa11.64□□□□□ -0.55
RTFDC1-202ENST00000357348 OR4D9Q8NGE8 314 aa11.64□□□□□ -0.55
RTFDC1-202ENST00000357348 MMABQ96EY8 250 aaPredicted RBP11.64□□□□□ -0.55
RTFDC1-202ENST00000357348 CCDC120Q96HB5 630 aa11.64□□□□□ -0.55
RTFDC1-202ENST00000357348 SLC41A2Q96JW4 573 aa11.64□□□□□ -0.55
RTFDC1-202ENST00000357348 OR6C1Q96RD1 312 aa11.64□□□□□ -0.55
RTFDC1-202ENST00000357348 SERINC2Q96SA4 455 aa11.64□□□□□ -0.55
RTFDC1-202ENST00000357348 FAIM2Q9BWQ8 316 aa11.64□□□□□ -0.55
RTFDC1-202ENST00000357348 FN3KQ9H479 309 aa11.64□□□□□ -0.55
RTFDC1-202ENST00000357348 ZNF768Q9H5H4 540 aaKnown RBP11.64□□□□□ -0.55
RTFDC1-202ENST00000357348 SLC35C2Q9NQQ7 365 aa11.64□□□□□ -0.55
RTFDC1-202ENST00000357348 DLL4Q9NR61 685 aa11.64□□□□□ -0.55
RTFDC1-202ENST00000357348 SCP2D1Q9UJQ7 156 aa11.64□□□□□ -0.55
RTFDC1-202ENST00000357348 DAPP1Q9UN19 280 aa11.64□□□□□ -0.55
RTFDC1-202ENST00000357348 RASD1Q9Y272 281 aa11.64□□□□□ -0.55
RTFDC1-202ENST00000357348 TMEM184BQ9Y519 407 aaPredicted RBP11.64□□□□□ -0.55
RTFDC1-202ENST00000357348 CELSR3Q9NYQ7 3312 aa11.64□□□□□ -0.55
RTFDC1-202ENST00000357348 TRAV6A0A075B6T7 132 aa11.63□□□□□ -0.55
RTFDC1-202ENST00000357348 D6RAR5 112 aa11.63□□□□□ -0.55
RTFDC1-202ENST00000357348 G3V3Q6 166 aa11.63□□□□□ -0.55
RTFDC1-202ENST00000357348 I3L521 148 aa11.63□□□□□ -0.55
RTFDC1-202ENST00000357348 SOCS6O14544 535 aa11.63□□□□□ -0.55
RTFDC1-202ENST00000357348 GPR171O14626 319 aa11.63□□□□□ -0.55
RTFDC1-202ENST00000357348 FOXS1O43638 330 aa11.63□□□□□ -0.55
RTFDC1-202ENST00000357348 PLPP2O43688 288 aa11.63□□□□□ -0.55
RTFDC1-202ENST00000357348 GALR3O60755 368 aaPredicted RBP11.63□□□□□ -0.55
RTFDC1-202ENST00000357348 NTSP30990 170 aa11.63□□□□□ -0.55
RTFDC1-202ENST00000357348 OR1D4P47884 311 aa11.63□□□□□ -0.55
RTFDC1-202ENST00000357348 PRTGQ2VWP7 1150 aa11.63□□□□□ -0.55
RTFDC1-202ENST00000357348 C1orf189Q5VU69 101 aa11.63□□□□□ -0.55
RTFDC1-202ENST00000357348 MRM1Q6IN84 353 aaKnown RBP11.63□□□□□ -0.55
RTFDC1-202ENST00000357348 LYPD4Q6UWN0 246 aa11.63□□□□□ -0.55
RTFDC1-202ENST00000357348 BTN2A1Q7KYR7 527 aa11.63□□□□□ -0.55
RTFDC1-202ENST00000357348 PRSS42Q7Z5A4 293 aa11.63□□□□□ -0.55
RTFDC1-202ENST00000357348 ACBD7Q8N6N7 88 aa11.63□□□□□ -0.55
RTFDC1-202ENST00000357348 SAMD12Q8N8I0 201 aa11.63□□□□□ -0.55
RTFDC1-202ENST00000357348 TOR1AIP2Q8NFQ8 470 aa11.63□□□□□ -0.55
RTFDC1-202ENST00000357348 DOK4Q8TEW6 326 aa11.63□□□□□ -0.55
RTFDC1-202ENST00000357348 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.63□□□□□ -0.55
RTFDC1-202ENST00000357348 WBP1Q96G27 269 aa11.63□□□□□ -0.55
RTFDC1-202ENST00000357348 RBP7Q96R05 134 aa11.63□□□□□ -0.55
RTFDC1-202ENST00000357348 BBS4Q96RK4 519 aa11.63□□□□□ -0.55
RTFDC1-202ENST00000357348 SLC38A1Q9H2H9 487 aa11.63□□□□□ -0.55
RTFDC1-202ENST00000357348 ZCCHC4Q9H5U6 513 aa11.63□□□□□ -0.55
RTFDC1-202ENST00000357348 APMAPQ9HDC9 416 aa11.63□□□□□ -0.55
RTFDC1-202ENST00000357348 INPP5EQ9NRR6 644 aa11.63□□□□□ -0.55
RTFDC1-202ENST00000357348 OCIAD1Q9NX40 245 aa11.63□□□□□ -0.55
RTFDC1-202ENST00000357348 UBQLN2Q9UHD9 624 aa11.63□□□□□ -0.55
RTFDC1-202ENST00000357348 GPR55Q9Y2T6 319 aaPredicted RBP11.63□□□□□ -0.55
RTFDC1-202ENST00000357348 FREM2Q5SZK8 3169 aa11.63□□□□□ -0.55
RTFDC1-202ENST00000357348 GSTZ1O43708 216 aaPredicted RBP11.63□□□□□ -0.55
RTFDC1-202ENST00000357348 FZD7O75084 574 aa11.63□□□□□ -0.55
RTFDC1-202ENST00000357348 LDB3O75112 727 aa11.63□□□□□ -0.55
RTFDC1-202ENST00000357348 SCO1O75880 301 aa11.63□□□□□ -0.55
RTFDC1-202ENST00000357348 UBL3O95164 117 aa11.63□□□□□ -0.55
RTFDC1-202ENST00000357348 CH25HO95992 272 aa11.63□□□□□ -0.55
RTFDC1-202ENST00000357348 THY1P04216 161 aa11.63□□□□□ -0.55
RTFDC1-202ENST00000357348 CTRB1P17538 263 aa11.63□□□□□ -0.55
RTFDC1-202ENST00000357348 TRHRP34981 398 aaPredicted RBP11.63□□□□□ -0.55
RTFDC1-202ENST00000357348 SRP9P49458 86 aaKnown RBP11.63□□□□□ -0.55
RTFDC1-202ENST00000357348 PRKAG1P54619 331 aa11.63□□□□□ -0.55
RTFDC1-202ENST00000357348 PUDPQ08623 228 aa11.63□□□□□ -0.55
RTFDC1-202ENST00000357348 POU4F3Q15319 338 aa11.63□□□□□ -0.55
RTFDC1-202ENST00000357348 CSRP2Q16527 193 aa11.63□□□□□ -0.55
RTFDC1-202ENST00000357348 CTRB2Q6GPI1 263 aa11.63□□□□□ -0.55
RTFDC1-202ENST00000357348 MBOAT2Q6ZWT7 520 aa11.63□□□□□ -0.55
RTFDC1-202ENST00000357348 ARHGEF39Q8N4T4 335 aa11.63□□□□□ -0.55
RTFDC1-202ENST00000357348 TMEM52Q8NDY8 209 aa11.63□□□□□ -0.55
RTFDC1-202ENST00000357348 OR2T33Q8NG76 320 aa11.63□□□□□ -0.55
RTFDC1-202ENST00000357348 MOAP1Q96BY2 351 aa11.63□□□□□ -0.55
RTFDC1-202ENST00000357348 NXPE2Q96DL1 559 aa11.63□□□□□ -0.55
RTFDC1-202ENST00000357348 PEX11GQ96HA9 241 aa11.63□□□□□ -0.55
RTFDC1-202ENST00000357348 LYARQ9NX58 379 aaKnown RBP11.63□□□□□ -0.55
RTFDC1-202ENST00000357348 NPFFR2Q9Y5X5 522 aa11.63□□□□□ -0.55
RTFDC1-202ENST00000357348 CNOT1A5YKK6 2376 aaKnown RBP11.63□□□□□ -0.55
RTFDC1-202ENST00000357348 CIB4A0PJX0 185 aa11.62□□□□□ -0.55
RTFDC1-202ENST00000357348 ZNF749O43361 778 aa11.62□□□□□ -0.55
RTFDC1-202ENST00000357348 TIAF1O95411 115 aa11.62□□□□□ -0.55
RTFDC1-202ENST00000357348 SLC2A10O95528 541 aa11.62□□□□□ -0.55
RTFDC1-202ENST00000357348 NAT1P18440 290 aa11.62□□□□□ -0.55
RTFDC1-202ENST00000357348 ZNF10P21506 573 aaPredicted RBP11.62□□□□□ -0.55
RTFDC1-202ENST00000357348 ACP1P24666 158 aa11.62□□□□□ -0.55
RTFDC1-202ENST00000357348 TSFMP43897 325 aaKnown RBP11.62□□□□□ -0.55
RTFDC1-202ENST00000357348 DUSP2Q05923 314 aa11.62□□□□□ -0.55
RTFDC1-202ENST00000357348 DYRK1AQ13627 763 aa11.62□□□□□ -0.55
RTFDC1-202ENST00000357348 GALEQ14376 348 aa11.62□□□□□ -0.55
RTFDC1-202ENST00000357348 ST3GAL2Q16842 350 aa11.62□□□□□ -0.55
RTFDC1-202ENST00000357348 ZNF311Q5JNZ3 666 aa11.62□□□□□ -0.55
RTFDC1-202ENST00000357348 TCTE1Q5JU00 501 aa11.62□□□□□ -0.55
RTFDC1-202ENST00000357348 CDC73Q6P1J9 531 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms