RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 Q499Y3 187 aa10.92□□□□□ -0.66
COL9A1-202ENST00000357250 GPR157Q5UAW9 335 aa10.92□□□□□ -0.66
COL9A1-202ENST00000357250 AADACL4Q5VUY2 407 aa10.92□□□□□ -0.66
COL9A1-202ENST00000357250 AFMIDQ63HM1 303 aa10.92□□□□□ -0.66
COL9A1-202ENST00000357250 FRMD1Q8N878 549 aa10.92□□□□□ -0.66
COL9A1-202ENST00000357250 DNAAF1Q8NEP3 725 aa10.92□□□□□ -0.66
COL9A1-202ENST00000357250 BCL7CQ8WUZ0 217 aaPredicted RBP10.92□□□□□ -0.66
COL9A1-202ENST00000357250 DNAJA3Q96EY1 480 aa10.92□□□□□ -0.66
COL9A1-202ENST00000357250 GIMAP5Q96F15 307 aa10.92□□□□□ -0.66
COL9A1-202ENST00000357250 ZNF649Q9BS31 505 aa10.92□□□□□ -0.66
COL9A1-202ENST00000357250 C1orf198Q9H425 327 aa10.92□□□□□ -0.66
COL9A1-202ENST00000357250 LYRM4Q9HD34 91 aa10.92□□□□□ -0.66
COL9A1-202ENST00000357250 CXXC1Q9P0U4 656 aaPredicted RBP10.92□□□□□ -0.66
COL9A1-202ENST00000357250 HS3ST3A1Q9Y663 406 aa10.92□□□□□ -0.66
COL9A1-202ENST00000357250 TRAV36DV7A0A075B6V5 113 aa10.92□□□□□ -0.66
COL9A1-202ENST00000357250 FZD7O75084 574 aa10.92□□□□□ -0.66
COL9A1-202ENST00000357250 ALDOBP05062 364 aa10.92□□□□□ -0.66
COL9A1-202ENST00000357250 PSMB1P20618 241 aaKnown RBP10.92□□□□□ -0.66
COL9A1-202ENST00000357250 BDKRB2P30411 391 aa10.92□□□□□ -0.66
COL9A1-202ENST00000357250 CCNJQ5T5M9 372 aa10.92□□□□□ -0.66
COL9A1-202ENST00000357250 ELP2Q6IA86 826 aa10.92□□□□□ -0.66
COL9A1-202ENST00000357250 ABHD17CQ6PCB6 329 aa10.92□□□□□ -0.66
COL9A1-202ENST00000357250 RNF175Q8N4F7 328 aa10.92□□□□□ -0.66
COL9A1-202ENST00000357250 OR56B2PQ8NGI1 322 aa10.92□□□□□ -0.66
COL9A1-202ENST00000357250 OR1S1Q8NH92 325 aa10.92□□□□□ -0.66
COL9A1-202ENST00000357250 CXorf36Q9H7Y0 433 aa10.92□□□□□ -0.66
COL9A1-202ENST00000357250 PLEKHA3Q9HB20 300 aa10.92□□□□□ -0.66
COL9A1-202ENST00000357250 GPR160Q9UJ42 338 aa10.92□□□□□ -0.66
COL9A1-202ENST00000357250 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.92□□□□□ -0.66
COL9A1-202ENST00000357250 SLC43A1O75387 559 aa10.92□□□□□ -0.66
COL9A1-202ENST00000357250 TGM6O95932 706 aa10.92□□□□□ -0.66
COL9A1-202ENST00000357250 IFNA17P01571 189 aa10.92□□□□□ -0.66
COL9A1-202ENST00000357250 IRS1P35568 1242 aa10.92□□□□□ -0.66
COL9A1-202ENST00000357250 PXNP49023 591 aaPredicted RBP10.92□□□□□ -0.66
COL9A1-202ENST00000357250 SMN1Q16637 294 aaKnown RBP10.92□□□□□ -0.66
COL9A1-202ENST00000357250 ZNF529Q6P280 563 aa10.92□□□□□ -0.66
COL9A1-202ENST00000357250 MTFR2Q6P444 385 aa10.92□□□□□ -0.66
COL9A1-202ENST00000357250 PRR22Q8IZ63 422 aa10.92□□□□□ -0.66
COL9A1-202ENST00000357250 RSC1A1Q92681 617 aa10.92□□□□□ -0.66
COL9A1-202ENST00000357250 GPR78Q96P69 363 aa10.92□□□□□ -0.66
COL9A1-202ENST00000357250 ULBP2Q9BZM5 246 aa10.92□□□□□ -0.66
COL9A1-202ENST00000357250 KCNJ16Q9NPI9 418 aa10.92□□□□□ -0.66
COL9A1-202ENST00000357250 FAM183AA6NL82 134 aa10.91□□□□□ -0.66
COL9A1-202ENST00000357250 I6L893 689 aaPredicted RBP10.91□□□□□ -0.66
COL9A1-202ENST00000357250 TOR1AO14656 332 aa10.91□□□□□ -0.66
COL9A1-202ENST00000357250 TAPBPO15533 448 aa10.91□□□□□ -0.66
COL9A1-202ENST00000357250 CTNSO60931 367 aa10.91□□□□□ -0.66
COL9A1-202ENST00000357250 PFN3P60673 137 aa10.91□□□□□ -0.66
COL9A1-202ENST00000357250 HOXC5Q00444 222 aa10.91□□□□□ -0.66
COL9A1-202ENST00000357250 P2RY14Q15391 338 aa10.91□□□□□ -0.66
COL9A1-202ENST00000357250 OR13C2Q8NGS9 318 aa10.91□□□□□ -0.66
COL9A1-202ENST00000357250 OR51Q1Q8NH59 317 aa10.91□□□□□ -0.66
COL9A1-202ENST00000357250 MYEOVQ96EZ4 313 aa10.91□□□□□ -0.66
COL9A1-202ENST00000357250 ALG12Q9BV10 488 aa10.91□□□□□ -0.66
COL9A1-202ENST00000357250 KIR3DX1Q9H7L2 352 aa10.91□□□□□ -0.66
COL9A1-202ENST00000357250 MUTYHQ9UIF7 546 aa10.91□□□□□ -0.66
COL9A1-202ENST00000357250 RREB1Q92766 1687 aa10.91□□□□□ -0.66
COL9A1-202ENST00000357250 CD300LBA8K4G0 201 aa10.91□□□□□ -0.66
COL9A1-202ENST00000357250 POU3F2P20265 443 aaPredicted RBP10.91□□□□□ -0.66
COL9A1-202ENST00000357250 TRHRP34981 398 aaPredicted RBP10.91□□□□□ -0.66
COL9A1-202ENST00000357250 EIF1P41567 113 aaKnown RBP10.91□□□□□ -0.66
COL9A1-202ENST00000357250 POU3F1Q03052 451 aaPredicted RBP10.91□□□□□ -0.66
COL9A1-202ENST00000357250 C17orf67Q0P5P2 114 aa10.91□□□□□ -0.66
COL9A1-202ENST00000357250 PEA15Q15121 130 aa10.91□□□□□ -0.66
COL9A1-202ENST00000357250 TMEM31Q5JXX7 168 aa10.91□□□□□ -0.66
COL9A1-202ENST00000357250 ENTHD1Q8IYW4 607 aa10.91□□□□□ -0.66
COL9A1-202ENST00000357250 LCORQ96JN0 433 aaPredicted RBP10.91□□□□□ -0.66
COL9A1-202ENST00000357250 SEMA6CQ9H3T2 930 aa10.91□□□□□ -0.66
COL9A1-202ENST00000357250 GLIPR2Q9H4G4 154 aa10.91□□□□□ -0.66
COL9A1-202ENST00000357250 WDR76Q9H967 626 aa10.91□□□□□ -0.66
COL9A1-202ENST00000357250 TMEM100Q9NV29 134 aa10.91□□□□□ -0.66
COL9A1-202ENST00000357250 CAMK2AQ9UQM7 478 aa10.91□□□□□ -0.66
COL9A1-202ENST00000357250 LSM5Q9Y4Y9 91 aaKnown RBP10.91□□□□□ -0.66
COL9A1-202ENST00000357250 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.91□□□□□ -0.66
COL9A1-202ENST00000357250 SCN1AP35498 2009 aa10.91□□□□□ -0.66
COL9A1-202ENST00000357250 NSG1A0A0A6YYJ2 146 aa10.91□□□□□ -0.66
COL9A1-202ENST00000357250 J3KTA2 159 aa10.91□□□□□ -0.66
COL9A1-202ENST00000357250 NPPBP16860 134 aa10.91□□□□□ -0.66
COL9A1-202ENST00000357250 TNFSF4P23510 183 aa10.91□□□□□ -0.66
COL9A1-202ENST00000357250 NKX2-5P52952 324 aaPredicted RBP10.91□□□□□ -0.66
COL9A1-202ENST00000357250 SRPXP78539 464 aa10.91□□□□□ -0.66
COL9A1-202ENST00000357250 YIF1BQ5BJH7 314 aa10.91□□□□□ -0.66
COL9A1-202ENST00000357250 BPIFB2Q8N4F0 458 aa10.91□□□□□ -0.66
COL9A1-202ENST00000357250 AGBL5Q8NDL9 886 aa10.91□□□□□ -0.66
COL9A1-202ENST00000357250 OR6T1Q8NGN1 323 aa10.91□□□□□ -0.66
COL9A1-202ENST00000357250 SNX18Q96RF0 628 aa10.91□□□□□ -0.66
COL9A1-202ENST00000357250 METTL9Q9H1A3 318 aa10.91□□□□□ -0.66
COL9A1-202ENST00000357250 DUSP22Q9NRW4 184 aa10.91□□□□□ -0.66
COL9A1-202ENST00000357250 TXNL4BQ9NX01 149 aaKnown RBP10.91□□□□□ -0.66
COL9A1-202ENST00000357250 RHBDD3Q9Y3P4 386 aa10.91□□□□□ -0.66
COL9A1-202ENST00000357250 TRBV11-1A0A0K0K1C0 115 aa10.9□□□□□ -0.66
COL9A1-202ENST00000357250 AQP9O43315 295 aa10.9□□□□□ -0.66
COL9A1-202ENST00000357250 IGLV3-25P01717 112 aa10.9□□□□□ -0.66
COL9A1-202ENST00000357250 TRAPPC2P0DI81 140 aa10.9□□□□□ -0.66
COL9A1-202ENST00000357250 TRAPPC2BP0DI82 140 aa10.9□□□□□ -0.66
COL9A1-202ENST00000357250 CSNK1G2P78368 415 aa10.9□□□□□ -0.66
COL9A1-202ENST00000357250 SLC35A1P78382 337 aa10.9□□□□□ -0.66
COL9A1-202ENST00000357250 OR2G6Q5TZ20 316 aa10.9□□□□□ -0.66
COL9A1-202ENST00000357250 NKAIN3Q8N8D7 197 aa10.9□□□□□ -0.66
COL9A1-202ENST00000357250 KCNG3Q8TAE7 436 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms