RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 JUNP05412 331 aaKnown RBP9.91□□□□□ -0.82
RTN3-204ENST00000354497 LTA4HP09960 611 aaKnown RBP9.91□□□□□ -0.82
RTN3-204ENST00000354497 PSPHP78330 225 aa9.91□□□□□ -0.82
RTN3-204ENST00000354497 PPA1Q15181 289 aa9.91□□□□□ -0.82
RTN3-204ENST00000354497 CARTPTQ16568 116 aa9.91□□□□□ -0.82
RTN3-204ENST00000354497 GLYR1Q49A26 553 aaPredicted RBP9.91□□□□□ -0.82
RTN3-204ENST00000354497 YIF1BQ5BJH7 314 aa9.91□□□□□ -0.82
RTN3-204ENST00000354497 PDSS1Q5T2R2 415 aa9.91□□□□□ -0.82
RTN3-204ENST00000354497 HBMQ6B0K9 141 aa9.91□□□□□ -0.82
RTN3-204ENST00000354497 KRT80Q6KB66 452 aa9.91□□□□□ -0.82
RTN3-204ENST00000354497 TFAP2EQ6VUC0 442 aa9.91□□□□□ -0.82
RTN3-204ENST00000354497 NUFIP2Q7Z417 695 aaKnown RBP9.91□□□□□ -0.82
RTN3-204ENST00000354497 CTAGE3PQ8IX95 158 aa9.91□□□□□ -0.82
RTN3-204ENST00000354497 GABRG1Q8N1C3 465 aa9.91□□□□□ -0.82
RTN3-204ENST00000354497 FBXL14Q8N1E6 418 aa9.91□□□□□ -0.82
RTN3-204ENST00000354497 METTL4Q8N3J2 472 aa9.91□□□□□ -0.82
RTN3-204ENST00000354497 L3MBTL4Q8NA19 623 aa9.91□□□□□ -0.82
RTN3-204ENST00000354497 PIK3C3Q8NEB9 887 aa9.91□□□□□ -0.82
RTN3-204ENST00000354497 SLC26A7Q8TE54 656 aa9.91□□□□□ -0.82
RTN3-204ENST00000354497 STON2Q8WXE9 905 aa9.91□□□□□ -0.82
RTN3-204ENST00000354497 SLC9A6Q92581 669 aa9.91□□□□□ -0.82
RTN3-204ENST00000354497 EXOSC8Q96B26 276 aaKnown RBP9.91□□□□□ -0.82
RTN3-204ENST00000354497 TM4SF18Q96CE8 201 aa9.91□□□□□ -0.82
RTN3-204ENST00000354497 RBM14Q96PK6 669 aaKnown RBP9.91□□□□□ -0.82
RTN3-204ENST00000354497 TBL1XR1Q9BZK7 514 aa9.91□□□□□ -0.82
RTN3-204ENST00000354497 TRIM31Q9BZY9 425 aa9.91□□□□□ -0.82
RTN3-204ENST00000354497 NOL11Q9H8H0 719 aaKnown RBP9.91□□□□□ -0.82
RTN3-204ENST00000354497 SAYSD1Q9NPB0 183 aa9.91□□□□□ -0.82
RTN3-204ENST00000354497 CBLN4Q9NTU7 201 aa9.91□□□□□ -0.82
RTN3-204ENST00000354497 REV1Q9UBZ9 1251 aa9.91□□□□□ -0.82
RTN3-204ENST00000354497 ABCG2Q9UNQ0 655 aa9.91□□□□□ -0.82
RTN3-204ENST00000354497 CACNG2Q9Y698 323 aa9.91□□□□□ -0.82
RTN3-204ENST00000354497 TOR1AO14656 332 aa9.9□□□□□ -0.82
RTN3-204ENST00000354497 TP73O15350 636 aa9.9□□□□□ -0.82
RTN3-204ENST00000354497 LYZL6O75951 148 aa9.9□□□□□ -0.82
RTN3-204ENST00000354497 LY6HO94772 140 aa9.9□□□□□ -0.82
RTN3-204ENST00000354497 SIX3O95343 332 aaPredicted RBP9.9□□□□□ -0.82
RTN3-204ENST00000354497 APEHP13798 732 aaKnown RBP9.9□□□□□ -0.82
RTN3-204ENST00000354497 ZNF26P17031 533 aaPredicted RBP9.9□□□□□ -0.82
RTN3-204ENST00000354497 ME2P23368 584 aa9.9□□□□□ -0.82
RTN3-204ENST00000354497 SRP14P37108 136 aaKnown RBP9.9□□□□□ -0.82
RTN3-204ENST00000354497 DDOSTP39656 456 aa9.9□□□□□ -0.82
RTN3-204ENST00000354497 FABP6P51161 128 aa9.9□□□□□ -0.82
RTN3-204ENST00000354497 DECR1Q16698 335 aa9.9□□□□□ -0.82
RTN3-204ENST00000354497 TBRG1Q3YBR2 411 aa9.9□□□□□ -0.82
RTN3-204ENST00000354497 ANKRD39Q53RE8 183 aa9.9□□□□□ -0.82
RTN3-204ENST00000354497 FRG2Q64ET8 278 aa9.9□□□□□ -0.82
RTN3-204ENST00000354497 SLC22A25Q6T423 547 aa9.9□□□□□ -0.82
RTN3-204ENST00000354497 NKAIN4Q8IVV8 208 aa9.9□□□□□ -0.82
RTN3-204ENST00000354497 TUSC5Q8IXB3 177 aa9.9□□□□□ -0.82
RTN3-204ENST00000354497 PARP8Q8N3A8 854 aa9.9□□□□□ -0.82
RTN3-204ENST00000354497 POU5F2Q8N7G0 328 aa9.9□□□□□ -0.82
RTN3-204ENST00000354497 FANK1Q8TC84 345 aa9.9□□□□□ -0.82
RTN3-204ENST00000354497 ZNF675Q8TD23 568 aa9.9□□□□□ -0.82
RTN3-204ENST00000354497 ABHD3Q8WU67 409 aa9.9□□□□□ -0.82
RTN3-204ENST00000354497 KCTD4Q8WVF5 259 aa9.9□□□□□ -0.82
RTN3-204ENST00000354497 PYDC1Q8WXC3 89 aa9.9□□□□□ -0.82
RTN3-204ENST00000354497 PROX1Q92786 737 aa9.9□□□□□ -0.82
RTN3-204ENST00000354497 TMIGD2Q96BF3 282 aa9.9□□□□□ -0.82
RTN3-204ENST00000354497 MSI2Q96DH6 328 aaKnown RBP9.9□□□□□ -0.82
RTN3-204ENST00000354497 MUCL1Q96DR8 90 aa9.9□□□□□ -0.82
RTN3-204ENST00000354497 CNBD2Q96M20 576 aa9.9□□□□□ -0.82
RTN3-204ENST00000354497 ZNF681Q96N22 645 aa9.9□□□□□ -0.82
RTN3-204ENST00000354497 FRG2BQ96QU4 278 aa9.9□□□□□ -0.82
RTN3-204ENST00000354497 SORT1Q99523 831 aa9.9□□□□□ -0.82
RTN3-204ENST00000354497 CPNE1Q99829 537 aa9.9□□□□□ -0.82
RTN3-204ENST00000354497 C6orf62Q9GZU0 229 aaPredicted RBP9.9□□□□□ -0.82
RTN3-204ENST00000354497 ELOVL6Q9H5J4 265 aa9.9□□□□□ -0.82
RTN3-204ENST00000354497 GIMAP4Q9NUV9 329 aa9.9□□□□□ -0.82
RTN3-204ENST00000354497 FAM120CQ9NX05 1096 aaKnown RBP9.9□□□□□ -0.82
RTN3-204ENST00000354497 B3GNT2Q9NY97 397 aa9.9□□□□□ -0.82
RTN3-204ENST00000354497 TAS2R9Q9NYW1 312 aa9.9□□□□□ -0.82
RTN3-204ENST00000354497 TMEM5Q9Y2B1 443 aa9.9□□□□□ -0.82
RTN3-204ENST00000354497 A0A0J9YW62 118 aa9.9□□□□□ -0.83
RTN3-204ENST00000354497 E7EQL1 145 aa9.9□□□□□ -0.83
RTN3-204ENST00000354497 ANGPTL1O95841 491 aa9.9□□□□□ -0.83
RTN3-204ENST00000354497 TGFAP01135 160 aa9.9□□□□□ -0.83
RTN3-204ENST00000354497 GSNP06396 782 aa9.9□□□□□ -0.83
RTN3-204ENST00000354497 CSF3P09919 207 aa9.9□□□□□ -0.83
RTN3-204ENST00000354497 MTHFD2P13995 350 aa9.9□□□□□ -0.83
RTN3-204ENST00000354497 ZNF17P17021 662 aa9.9□□□□□ -0.83
RTN3-204ENST00000354497 IVDP26440 423 aa9.9□□□□□ -0.83
RTN3-204ENST00000354497 SSTR1P30872 391 aa9.9□□□□□ -0.83
RTN3-204ENST00000354497 SPRP35270 261 aaPredicted RBP9.9□□□□□ -0.83
RTN3-204ENST00000354497 SPOCK1Q08629 439 aa9.9□□□□□ -0.83
RTN3-204ENST00000354497 P2RY6Q15077 328 aa9.9□□□□□ -0.83
RTN3-204ENST00000354497 CR1LQ2VPA4 569 aa9.9□□□□□ -0.83
RTN3-204ENST00000354497 C11orf71Q6IPW1 123 aa9.9□□□□□ -0.83
RTN3-204ENST00000354497 ZNF544Q6NX49 715 aa9.9□□□□□ -0.83
RTN3-204ENST00000354497 FKBP9P1Q75LS8 142 aa9.9□□□□□ -0.83
RTN3-204ENST00000354497 FAM9CQ8IZT9 166 aa9.9□□□□□ -0.83
RTN3-204ENST00000354497 MUC15Q8N387 334 aa9.9□□□□□ -0.83
RTN3-204ENST00000354497 RFLNBQ8N5W9 214 aa9.9□□□□□ -0.83
RTN3-204ENST00000354497 PPM1NQ8N819 430 aa9.9□□□□□ -0.83
RTN3-204ENST00000354497 OSTF1Q92882 214 aa9.9□□□□□ -0.83
RTN3-204ENST00000354497 ADGRG7Q96K78 797 aa9.9□□□□□ -0.83
RTN3-204ENST00000354497 RNF145Q96MT1 663 aa9.9□□□□□ -0.83
RTN3-204ENST00000354497 NMUR2Q9GZQ4 415 aa9.9□□□□□ -0.83
RTN3-204ENST00000354497 TIGARQ9NQ88 270 aa9.9□□□□□ -0.83
RTN3-204ENST00000354497 EIF3KQ9UBQ5 218 aaKnown RBP9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms