RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 IGF2P01344 180 aa7.47□□□□□ -1.21
CD44-205ENST00000352818 IGKV1D-16P01601 117 aa7.47□□□□□ -1.21
CD44-205ENST00000352818 PRG2P13727 222 aa7.47□□□□□ -1.21
CD44-205ENST00000352818 MAOAP21397 527 aa7.47□□□□□ -1.21
CD44-205ENST00000352818 FBLP22087 321 aaKnown RBP7.47□□□□□ -1.21
CD44-205ENST00000352818 SSTR4P31391 388 aa7.47□□□□□ -1.21
CD44-205ENST00000352818 RORAP35398 523 aa7.47□□□□□ -1.21
CD44-205ENST00000352818 LIPAP38571 399 aa7.47□□□□□ -1.21
CD44-205ENST00000352818 ACAA2P42765 397 aaKnown RBP7.47□□□□□ -1.21
CD44-205ENST00000352818 SERPINB10P48595 397 aa7.47□□□□□ -1.21
CD44-205ENST00000352818 PPM1FP49593 454 aaPredicted RBP7.47□□□□□ -1.21
CD44-205ENST00000352818 GAS1P54826 345 aa7.47□□□□□ -1.21
CD44-205ENST00000352818 SLC37A1P57057 533 aa7.47□□□□□ -1.21
CD44-205ENST00000352818 SOX8P57073 446 aa7.47□□□□□ -1.21
CD44-205ENST00000352818 LSM11P83369 360 aaKnown RBP eCLIP7.47□□□□□ -1.21
CD44-205ENST00000352818 HOXC5Q00444 222 aa7.47□□□□□ -1.21
CD44-205ENST00000352818 TMED1Q13445 227 aa7.47□□□□□ -1.21
CD44-205ENST00000352818 ZNF267Q14586 743 aaPredicted RBP7.47□□□□□ -1.21
CD44-205ENST00000352818 KCNAB1Q14722 419 aa7.47□□□□□ -1.21
CD44-205ENST00000352818 ELAVL1Q15717 326 aaKnown RBP7.47□□□□□ -1.21
CD44-205ENST00000352818 SNAPC1Q16533 368 aa7.47□□□□□ -1.21
CD44-205ENST00000352818 DGUOKQ16854 277 aa7.47□□□□□ -1.21
CD44-205ENST00000352818 SYT16Q17RD7 645 aa7.47□□□□□ -1.21
CD44-205ENST00000352818 PGGHGQ32M88 737 aa7.47□□□□□ -1.21
CD44-205ENST00000352818 KLHL22Q53GT1 634 aa7.47□□□□□ -1.21
CD44-205ENST00000352818 B3GNTL1Q67FW5 361 aaPredicted RBP7.47□□□□□ -1.21
CD44-205ENST00000352818 FAAH2Q6GMR7 532 aa7.47□□□□□ -1.21
CD44-205ENST00000352818 FAM180AQ6UWF9 173 aa7.47□□□□□ -1.21
CD44-205ENST00000352818 USP43Q70EL4 1123 aa7.47□□□□□ -1.21
CD44-205ENST00000352818 GPR135Q8IZ08 494 aa7.47□□□□□ -1.21
CD44-205ENST00000352818 PROKR2Q8NFJ6 384 aa7.47□□□□□ -1.21
CD44-205ENST00000352818 OR2T33Q8NG76 320 aa7.47□□□□□ -1.21
CD44-205ENST00000352818 PTPMT1Q8WUK0 201 aaPredicted RBP7.47□□□□□ -1.21
CD44-205ENST00000352818 MR1Q95460 341 aa7.47□□□□□ -1.21
CD44-205ENST00000352818 RFKQ969G6 155 aa7.47□□□□□ -1.21
CD44-205ENST00000352818 BORCS5Q969J3 196 aa7.47□□□□□ -1.21
CD44-205ENST00000352818 ZNF501Q96CX3 271 aaPredicted RBP7.47□□□□□ -1.21
CD44-205ENST00000352818 MBD6Q96DN6 1003 aa7.47□□□□□ -1.21
CD44-205ENST00000352818 COX4I2Q96KJ9 171 aa7.47□□□□□ -1.21
CD44-205ENST00000352818 ART5Q96L15 291 aa7.47□□□□□ -1.21
CD44-205ENST00000352818 LRR1Q96L50 414 aa7.47□□□□□ -1.21
CD44-205ENST00000352818 IL4I1Q96RQ9 567 aa7.47□□□□□ -1.21
CD44-205ENST00000352818 NDC1Q9BTX1 674 aa7.47□□□□□ -1.21
CD44-205ENST00000352818 CNPPD1Q9BV87 410 aa7.47□□□□□ -1.21
CD44-205ENST00000352818 PRR14Q9BWN1 585 aa7.47□□□□□ -1.21
CD44-205ENST00000352818 TAPBPLQ9BX59 468 aa7.47□□□□□ -1.21
CD44-205ENST00000352818 DSN1Q9H410 356 aa7.47□□□□□ -1.21
CD44-205ENST00000352818 EGLN3Q9H6Z9 239 aa7.47□□□□□ -1.21
CD44-205ENST00000352818 AMBNQ9NP70 447 aa7.47□□□□□ -1.21
CD44-205ENST00000352818 ISYNA1Q9NPH2 558 aa7.47□□□□□ -1.21
CD44-205ENST00000352818 MKKSQ9NPJ1 570 aaPredicted RBP7.47□□□□□ -1.21
CD44-205ENST00000352818 EXOSC3Q9NQT5 275 aaKnown RBP7.47□□□□□ -1.21
CD44-205ENST00000352818 CNIH4Q9P003 139 aa7.47□□□□□ -1.21
CD44-205ENST00000352818 CCDC59Q9P031 241 aaKnown RBP7.47□□□□□ -1.21
CD44-205ENST00000352818 TINAGQ9UJW2 476 aa7.47□□□□□ -1.21
CD44-205ENST00000352818 CBLCQ9ULV8 474 aa7.47□□□□□ -1.21
CD44-205ENST00000352818 ERVK-19Q9WJR5 959 aa7.47□□□□□ -1.21
CD44-205ENST00000352818 DTX4Q9Y2E6 619 aa7.47□□□□□ -1.21
CD44-205ENST00000352818 EXOSC1Q9Y3B2 195 aaKnown RBP7.47□□□□□ -1.21
CD44-205ENST00000352818 MED31Q9Y3C7 131 aa7.47□□□□□ -1.21
CD44-205ENST00000352818 RYR3Q15413 4870 aa7.47□□□□□ -1.21
CD44-205ENST00000352818 SCN2AQ99250 2005 aa7.47□□□□□ -1.21
CD44-205ENST00000352818 PRKDCP78527 4128 aaKnown RBP7.46□□□□□ -1.21
CD44-205ENST00000352818 NPIPA5A0A0B4J1W7 369 aa7.46□□□□□ -1.22
CD44-205ENST00000352818 A0A1B0GWA3 101 aa7.46□□□□□ -1.22
CD44-205ENST00000352818 TMEM129A0AVI4 362 aa7.46□□□□□ -1.22
CD44-205ENST00000352818 OR6C76A6NM76 312 aa7.46□□□□□ -1.22
CD44-205ENST00000352818 EFCAB9A8MZ26 197 aa7.46□□□□□ -1.22
CD44-205ENST00000352818 NPIPA7E9PJI5 369 aa7.46□□□□□ -1.22
CD44-205ENST00000352818 M0R3G1 203 aa7.46□□□□□ -1.22
CD44-205ENST00000352818 HRKO00198 91 aa7.46□□□□□ -1.22
CD44-205ENST00000352818 CCRL2O00421 344 aa7.46□□□□□ -1.22
CD44-205ENST00000352818 TLX2O43763 284 aaPredicted RBP7.46□□□□□ -1.22
CD44-205ENST00000352818 AIREO43918 545 aa7.46□□□□□ -1.22
CD44-205ENST00000352818 CDC123O75794 336 aaPredicted RBP7.46□□□□□ -1.22
CD44-205ENST00000352818 RCBTB2O95199 551 aa7.46□□□□□ -1.22
CD44-205ENST00000352818 IL33O95760 270 aa7.46□□□□□ -1.22
CD44-205ENST00000352818 IGKV3-11P04433 115 aa7.46□□□□□ -1.22
CD44-205ENST00000352818 IFNA16P05015 189 aa7.46□□□□□ -1.22
CD44-205ENST00000352818 SCG5P05408 212 aa7.46□□□□□ -1.22
CD44-205ENST00000352818 CYC1P08574 325 aa7.46□□□□□ -1.22
CD44-205ENST00000352818 ADRA2AP08913 450 aa7.46□□□□□ -1.22
CD44-205ENST00000352818 RAB40ALP0C0E4 278 aa7.46□□□□□ -1.22
CD44-205ENST00000352818 GKN3PP0CG01 181 aa7.46□□□□□ -1.22
CD44-205ENST00000352818 NPIPA8P0DM63 369 aa7.46□□□□□ -1.22
CD44-205ENST00000352818 PPICP45877 212 aa7.46□□□□□ -1.22
CD44-205ENST00000352818 GPR4P46093 362 aa7.46□□□□□ -1.22
CD44-205ENST00000352818 RGS6P49758 472 aa7.46□□□□□ -1.22
CD44-205ENST00000352818 GPR143P51810 404 aa7.46□□□□□ -1.22
CD44-205ENST00000352818 ACY1Q03154 408 aa7.46□□□□□ -1.22
CD44-205ENST00000352818 RUNX1T1Q06455 604 aa7.46□□□□□ -1.22
CD44-205ENST00000352818 TFF3Q07654 80 aa7.46□□□□□ -1.22
CD44-205ENST00000352818 MLLT11Q13015 90 aaPredicted RBP7.46□□□□□ -1.22
CD44-205ENST00000352818 C1DQ13901 141 aaKnown RBP7.46□□□□□ -1.22
CD44-205ENST00000352818 PCOLCEQ15113 449 aa7.46□□□□□ -1.22
CD44-205ENST00000352818 ZNF829Q3KNS6 432 aaPredicted RBP7.46□□□□□ -1.22
CD44-205ENST00000352818 ARMCX4Q5H9R4 360 aa7.46□□□□□ -1.22
CD44-205ENST00000352818 ARMC4Q5T2S8 1044 aa7.46□□□□□ -1.22
CD44-205ENST00000352818 PRAMEF17Q5VTA0 474 aa7.46□□□□□ -1.22
CD44-205ENST00000352818 FNDC7Q5VTL7 733 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms