RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 IL3P08700 152 aa12.21□□□□□ -0.45
IFT88-202ENST00000351808 C1GALT1C1LP0DN25 315 aa12.21□□□□□ -0.45
IFT88-202ENST00000351808 RAB5AP20339 215 aa12.21□□□□□ -0.45
IFT88-202ENST00000351808 DDTP30046 118 aa12.21□□□□□ -0.45
IFT88-202ENST00000351808 ANXA11P50995 505 aaKnown RBP12.21□□□□□ -0.45
IFT88-202ENST00000351808 TAS2R41P59536 307 aa12.21□□□□□ -0.45
IFT88-202ENST00000351808 RPS24P62847 133 aaKnown RBP12.21□□□□□ -0.45
IFT88-202ENST00000351808 NUMA1Q14980 2115 aa12.21□□□□□ -0.45
IFT88-202ENST00000351808 NKAPLQ5M9Q1 402 aa12.21□□□□□ -0.45
IFT88-202ENST00000351808 C10orf120Q5SQS8 335 aa12.21□□□□□ -0.45
IFT88-202ENST00000351808 NXPE1Q8N323 547 aa12.21□□□□□ -0.45
IFT88-202ENST00000351808 TMED6Q8WW62 240 aa12.21□□□□□ -0.45
IFT88-202ENST00000351808 NEURL3Q96EH8 262 aa12.21□□□□□ -0.45
IFT88-202ENST00000351808 SLC25A18Q9H1K4 315 aa12.21□□□□□ -0.45
IFT88-202ENST00000351808 EXO5Q9H790 373 aa12.21□□□□□ -0.45
IFT88-202ENST00000351808 BRD9Q9H8M2 597 aa12.21□□□□□ -0.45
IFT88-202ENST00000351808 MIEF1Q9NQG6 463 aa12.21□□□□□ -0.45
IFT88-202ENST00000351808 ADARB2Q9NS39 739 aaKnown RBP12.21□□□□□ -0.45
IFT88-202ENST00000351808 COMMD9Q9P000 198 aa12.21□□□□□ -0.45
IFT88-202ENST00000351808 TAAR2Q9P1P5 351 aa12.21□□□□□ -0.45
IFT88-202ENST00000351808 SCN8AQ9UQD0 1980 aa12.21□□□□□ -0.45
IFT88-202ENST00000351808 TRBV5-4A0A0C4DH59 114 aa12.21□□□□□ -0.45
IFT88-202ENST00000351808 IFITM10A6NMD0 228 aa12.21□□□□□ -0.45
IFT88-202ENST00000351808 CCSO14618 274 aa12.21□□□□□ -0.45
IFT88-202ENST00000351808 MBTPS2O43462 519 aa12.21□□□□□ -0.45
IFT88-202ENST00000351808 F2P00734 622 aa12.21□□□□□ -0.45
IFT88-202ENST00000351808 NR2C1P13056 603 aa12.21□□□□□ -0.45
IFT88-202ENST00000351808 DAOP14920 347 aa12.21□□□□□ -0.45
IFT88-202ENST00000351808 DPP4P27487 766 aa12.21□□□□□ -0.45
IFT88-202ENST00000351808 GAREM2Q75VX8 874 aa12.21□□□□□ -0.45
IFT88-202ENST00000351808 MEPCEQ7L2J0 689 aaKnown RBP12.21□□□□□ -0.45
IFT88-202ENST00000351808 SZRD1Q7Z422 152 aa12.21□□□□□ -0.45
IFT88-202ENST00000351808 KLK6Q92876 244 aa12.21□□□□□ -0.45
IFT88-202ENST00000351808 NEIL2Q969S2 332 aa12.21□□□□□ -0.45
IFT88-202ENST00000351808 SAMD8Q96LT4 415 aa12.21□□□□□ -0.45
IFT88-202ENST00000351808 APMAPQ9HDC9 416 aa12.21□□□□□ -0.45
IFT88-202ENST00000351808 WASF3Q9UPY6 502 aa12.21□□□□□ -0.45
IFT88-202ENST00000351808 PIAS3Q9Y6X2 628 aa12.21□□□□□ -0.45
IFT88-202ENST00000351808 SULT2B1O00204 365 aa12.2□□□□□ -0.46
IFT88-202ENST00000351808 ARL6IP5O75915 188 aa12.2□□□□□ -0.46
IFT88-202ENST00000351808 CD8AP01732 235 aa12.2□□□□□ -0.46
IFT88-202ENST00000351808 IFNGR2P38484 337 aa12.2□□□□□ -0.46
IFT88-202ENST00000351808 OMPP47874 163 aa12.2□□□□□ -0.46
IFT88-202ENST00000351808 ATP1B3P54709 279 aa12.2□□□□□ -0.46
IFT88-202ENST00000351808 PPP2CBP62714 309 aa12.2□□□□□ -0.46
IFT88-202ENST00000351808 PPP2CAP67775 309 aa12.2□□□□□ -0.46
IFT88-202ENST00000351808 INPP5JQ15735 1006 aaPredicted RBP12.2□□□□□ -0.46
IFT88-202ENST00000351808 MST1LQ2TV78 715 aa12.2□□□□□ -0.46
IFT88-202ENST00000351808 ZNF792Q3KQV3 632 aa12.2□□□□□ -0.46
IFT88-202ENST00000351808 NIPAL3Q6P499 406 aa12.2□□□□□ -0.46
IFT88-202ENST00000351808 FAM83HQ6ZRV2 1179 aaPredicted RBP12.2□□□□□ -0.46
IFT88-202ENST00000351808 ABHD13Q7L211 337 aa12.2□□□□□ -0.46
IFT88-202ENST00000351808 OR5AP2Q8NGF4 316 aa12.2□□□□□ -0.46
IFT88-202ENST00000351808 HSPA12BQ96MM6 686 aa12.2□□□□□ -0.46
IFT88-202ENST00000351808 TGM7Q96PF1 710 aa12.2□□□□□ -0.46
IFT88-202ENST00000351808 GFI1Q99684 422 aa12.2□□□□□ -0.46
IFT88-202ENST00000351808 FKRPQ9H9S5 495 aa12.2□□□□□ -0.46
IFT88-202ENST00000351808 ZFP37Q9Y6Q3 630 aaPredicted RBP12.2□□□□□ -0.46
IFT88-202ENST00000351808 KIF26AQ9ULI4 1882 aaPredicted RBP12.2□□□□□ -0.46
IFT88-202ENST00000351808 MYO16Q9Y6X6 1858 aa12.2□□□□□ -0.46
IFT88-202ENST00000351808 CPSF4LA6NMK7 179 aaKnown RBP12.2□□□□□ -0.46
IFT88-202ENST00000351808 F5H5T6 163 aa12.2□□□□□ -0.46
IFT88-202ENST00000351808 RNASEK-C17orf49H0YIS7 233 aa12.2□□□□□ -0.46
IFT88-202ENST00000351808 RDH16O75452 317 aa12.2□□□□□ -0.46
IFT88-202ENST00000351808 PPP1R3DO95685 299 aa12.2□□□□□ -0.46
IFT88-202ENST00000351808 IFNGP01579 166 aa12.2□□□□□ -0.46
IFT88-202ENST00000351808 TMIGD3P0DMS9 266 aaPredicted RBP12.2□□□□□ -0.46
IFT88-202ENST00000351808 HSD17B7P56937 341 aa12.2□□□□□ -0.46
IFT88-202ENST00000351808 TAS2R20P59543 309 aa12.2□□□□□ -0.46
IFT88-202ENST00000351808 AP1S1P61966 158 aa12.2□□□□□ -0.46
IFT88-202ENST00000351808 HSPB3Q12988 150 aa12.2□□□□□ -0.46
IFT88-202ENST00000351808 TMEM244Q5VVB8 128 aa12.2□□□□□ -0.46
IFT88-202ENST00000351808 ETFBKMTQ8IXQ9 262 aa12.2□□□□□ -0.46
IFT88-202ENST00000351808 RASGEF1AQ8N9B8 481 aa12.2□□□□□ -0.46
IFT88-202ENST00000351808 SDR9C7Q8NEX9 313 aa12.2□□□□□ -0.46
IFT88-202ENST00000351808 OR6N1Q8NGY5 312 aa12.2□□□□□ -0.46
IFT88-202ENST00000351808 RNF141Q8WVD5 230 aa12.2□□□□□ -0.46
IFT88-202ENST00000351808 CLP1Q92989 425 aaKnown RBP12.2□□□□□ -0.46
IFT88-202ENST00000351808 SUCNR1Q9BXA5 334 aa12.2□□□□□ -0.46
IFT88-202ENST00000351808 OR51V1Q9H2C8 321 aa12.2□□□□□ -0.46
IFT88-202ENST00000351808 TMEM100Q9NV29 134 aa12.2□□□□□ -0.46
IFT88-202ENST00000351808 MED17Q9NVC6 651 aa12.2□□□□□ -0.46
IFT88-202ENST00000351808 MEIS3P1A6NDR6 274 aa12.2□□□□□ -0.46
IFT88-202ENST00000351808 C9JQL5 133 aa12.2□□□□□ -0.46
IFT88-202ENST00000351808 SNRNP70P08621 437 aaKnown RBP12.2□□□□□ -0.46
IFT88-202ENST00000351808 NR2F1P10589 423 aa12.2□□□□□ -0.46
IFT88-202ENST00000351808 HIST1H1BP16401 226 aaKnown RBP12.2□□□□□ -0.46
IFT88-202ENST00000351808 FAUP35544 74 aaKnown RBP12.2□□□□□ -0.46
IFT88-202ENST00000351808 MANFP55145 182 aaKnown RBP12.2□□□□□ -0.46
IFT88-202ENST00000351808 TAS2R43P59537 309 aa12.2□□□□□ -0.46
IFT88-202ENST00000351808 B4GALNT1Q00973 533 aa12.2□□□□□ -0.46
IFT88-202ENST00000351808 GAMTQ14353 236 aa12.2□□□□□ -0.46
IFT88-202ENST00000351808 SURF2Q15527 256 aaPredicted RBP12.2□□□□□ -0.46
IFT88-202ENST00000351808 FAM111BQ6SJ93 734 aa12.2□□□□□ -0.46
IFT88-202ENST00000351808 CLEC9AQ6UXN8 241 aa12.2□□□□□ -0.46
IFT88-202ENST00000351808 TMED4Q7Z7H5 227 aa12.2□□□□□ -0.46
IFT88-202ENST00000351808 OR2T33Q8NG76 320 aa12.2□□□□□ -0.46
IFT88-202ENST00000351808 PPTC7Q8NI37 304 aa12.2□□□□□ -0.46
IFT88-202ENST00000351808 PPP1R1CQ8WVI7 109 aa12.2□□□□□ -0.46
IFT88-202ENST00000351808 CMTM3Q96MX0 182 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms