RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 TP53BP1Q12888 1972 aaPredicted RBP16.58■□□□□ 0.25
PTP4A3-202ENST00000349124 A0A1B0GTH9 108 aa16.58■□□□□ 0.25
PTP4A3-202ENST00000349124 CIB4A0PJX0 185 aa16.58■□□□□ 0.25
PTP4A3-202ENST00000349124 SLC22A5O76082 557 aa16.58■□□□□ 0.25
PTP4A3-202ENST00000349124 RPP14O95059 124 aaKnown RBP16.58■□□□□ 0.25
PTP4A3-202ENST00000349124 EGFP01133 1207 aa16.58■□□□□ 0.25
PTP4A3-202ENST00000349124 MAT1AQ00266 395 aaKnown RBP16.58■□□□□ 0.25
PTP4A3-202ENST00000349124 PON3Q15166 354 aa16.58■□□□□ 0.25
PTP4A3-202ENST00000349124 HSD17B12Q53GQ0 312 aa16.58■□□□□ 0.25
PTP4A3-202ENST00000349124 OTPQ5XKR4 325 aa16.58■□□□□ 0.25
PTP4A3-202ENST00000349124 OR52I2Q8NH67 350 aa16.58■□□□□ 0.25
PTP4A3-202ENST00000349124 LMF1Q96S06 567 aa16.58■□□□□ 0.25
PTP4A3-202ENST00000349124 OR10A4Q9H209 315 aa16.58■□□□□ 0.25
PTP4A3-202ENST00000349124 ZCCHC4Q9H5U6 513 aa16.58■□□□□ 0.25
PTP4A3-202ENST00000349124 HCN3Q9P1Z3 774 aa16.58■□□□□ 0.25
PTP4A3-202ENST00000349124 CAMK2AQ9UQM7 478 aa16.58■□□□□ 0.25
PTP4A3-202ENST00000349124 ENTPD2Q9Y5L3 495 aa16.58■□□□□ 0.25
PTP4A3-202ENST00000349124 SPACA6W5XKT8 324 aa16.58■□□□□ 0.25
PTP4A3-202ENST00000349124 CEP290O15078 2479 aa16.58■□□□□ 0.24
PTP4A3-202ENST00000349124 SCO1O75880 301 aa16.58■□□□□ 0.24
PTP4A3-202ENST00000349124 NDUFB2O95178 105 aa16.58■□□□□ 0.24
PTP4A3-202ENST00000349124 MPC2O95563 127 aa16.58■□□□□ 0.24
PTP4A3-202ENST00000349124 CD276Q5ZPR3 534 aa16.58■□□□□ 0.24
PTP4A3-202ENST00000349124 NPSR1Q6W5P4 371 aa16.58■□□□□ 0.24
PTP4A3-202ENST00000349124 ZNF784Q8NCA9 323 aaPredicted RBP16.58■□□□□ 0.24
PTP4A3-202ENST00000349124 MOSPD2Q8NHP6 518 aa16.58■□□□□ 0.24
PTP4A3-202ENST00000349124 PHOSPHO2Q8TCD6 241 aa16.58■□□□□ 0.24
PTP4A3-202ENST00000349124 SLC2A12Q8TD20 617 aa16.58■□□□□ 0.24
PTP4A3-202ENST00000349124 OR2M2Q96R28 347 aa16.58■□□□□ 0.24
PTP4A3-202ENST00000349124 NRIP3Q9NQ35 241 aa16.58■□□□□ 0.24
PTP4A3-202ENST00000349124 ABRACLQ9P1F3 81 aa16.58■□□□□ 0.24
PTP4A3-202ENST00000349124 HEATR5AQ86XA9 2040 aa16.58■□□□□ 0.24
PTP4A3-202ENST00000349124 A0A0A6YYC8 382 aaPredicted RBP16.57■□□□□ 0.24
PTP4A3-202ENST00000349124 ZSCAN5BA6NJL1 495 aa16.57■□□□□ 0.24
PTP4A3-202ENST00000349124 I3L1I5 382 aaPredicted RBP16.57■□□□□ 0.24
PTP4A3-202ENST00000349124 BTG2P78543 158 aa16.57■□□□□ 0.24
PTP4A3-202ENST00000349124 CDONQ4KMG0 1287 aa16.57■□□□□ 0.24
PTP4A3-202ENST00000349124 ESCO2Q56NI9 601 aa16.57■□□□□ 0.24
PTP4A3-202ENST00000349124 FAM199XQ6PEV8 388 aaPredicted RBP16.57■□□□□ 0.24
PTP4A3-202ENST00000349124 KIAA1324Q6UXG2 1013 aaKnown RBP16.57■□□□□ 0.24
PTP4A3-202ENST00000349124 LINC00114Q6XXX2 140 aa16.57■□□□□ 0.24
PTP4A3-202ENST00000349124 FAM131CQ96AQ9 280 aa16.57■□□□□ 0.24
PTP4A3-202ENST00000349124 WDR89Q96FK6 387 aaPredicted RBP16.57■□□□□ 0.24
PTP4A3-202ENST00000349124 MAP6Q96JE9 813 aa16.57■□□□□ 0.24
PTP4A3-202ENST00000349124 CHIAQ9BZP6 476 aa16.57■□□□□ 0.24
PTP4A3-202ENST00000349124 RANBP3Q9H6Z4 567 aaPredicted RBP16.57■□□□□ 0.24
PTP4A3-202ENST00000349124 DLL4Q9NR61 685 aa16.57■□□□□ 0.24
PTP4A3-202ENST00000349124 ARL6IP5O75915 188 aa16.57■□□□□ 0.24
PTP4A3-202ENST00000349124 ZFPL1O95159 310 aa16.57■□□□□ 0.24
PTP4A3-202ENST00000349124 CFDP00746 253 aaPredicted RBP16.57■□□□□ 0.24
PTP4A3-202ENST00000349124 RAF1P04049 648 aa16.57■□□□□ 0.24
PTP4A3-202ENST00000349124 SPI1P17947 270 aa16.57■□□□□ 0.24
PTP4A3-202ENST00000349124 PBX2P40425 430 aa16.57■□□□□ 0.24
PTP4A3-202ENST00000349124 DIO1P49895 249 aa16.57■□□□□ 0.24
PTP4A3-202ENST00000349124 ZNF81P51508 661 aa16.57■□□□□ 0.24
PTP4A3-202ENST00000349124 KIAA1024LP59773 190 aa16.57■□□□□ 0.24
PTP4A3-202ENST00000349124 SDE2Q6IQ49 451 aa16.57■□□□□ 0.24
PTP4A3-202ENST00000349124 ZCCHC12Q6PEW1 402 aa16.57■□□□□ 0.24
PTP4A3-202ENST00000349124 OR11G2Q8NGC1 345 aa16.57■□□□□ 0.24
PTP4A3-202ENST00000349124 RPLP0P6Q8NHW5 317 aa16.57■□□□□ 0.24
PTP4A3-202ENST00000349124 RGP1Q92546 391 aaPredicted RBP16.57■□□□□ 0.24
PTP4A3-202ENST00000349124 RNF166Q96A37 237 aaPredicted RBP16.57■□□□□ 0.24
PTP4A3-202ENST00000349124 SLC25A38Q96DW6 304 aa16.57■□□□□ 0.24
PTP4A3-202ENST00000349124 TRIM2Q9C040 744 aa16.57■□□□□ 0.24
PTP4A3-202ENST00000349124 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.57■□□□□ 0.245e-7■■■■□ 19.5
PTP4A3-202ENST00000349124 C14orf105Q9NVL8 296 aa16.57■□□□□ 0.24
PTP4A3-202ENST00000349124 CPNE7Q9UBL6 633 aa16.57■□□□□ 0.24
PTP4A3-202ENST00000349124 EIF3KQ9UBQ5 218 aaKnown RBP16.57■□□□□ 0.24
PTP4A3-202ENST00000349124 RPS27P42677 84 aaKnown RBP16.56■□□□□ 0.24
PTP4A3-202ENST00000349124 ZNF267Q14586 743 aaPredicted RBP16.56■□□□□ 0.24
PTP4A3-202ENST00000349124 BTN2A1Q7KYR7 527 aa16.56■□□□□ 0.24
PTP4A3-202ENST00000349124 SGTBQ96EQ0 304 aa16.56■□□□□ 0.24
PTP4A3-202ENST00000349124 KLHDC3Q9BQ90 382 aa16.56■□□□□ 0.24
PTP4A3-202ENST00000349124 CCDC3Q9BQI4 270 aa16.56■□□□□ 0.24
PTP4A3-202ENST00000349124 SPRTNQ9H040 489 aaPredicted RBP16.56■□□□□ 0.24
PTP4A3-202ENST00000349124 METTL17Q9H7H0 456 aaPredicted RBP16.56■□□□□ 0.24
PTP4A3-202ENST00000349124 BAIAP2Q9UQB8 552 aa16.56■□□□□ 0.24
PTP4A3-202ENST00000349124 BLOC1S5-TXNDC5H3BN57 136 aa16.56■□□□□ 0.24
PTP4A3-202ENST00000349124 SERPINA3P01011 423 aa16.56■□□□□ 0.24
PTP4A3-202ENST00000349124 ST6GAL1P15907 406 aa16.56■□□□□ 0.24
PTP4A3-202ENST00000349124 VEGFCP49767 419 aa16.56■□□□□ 0.24
PTP4A3-202ENST00000349124 ARPC4P59998 168 aa16.56■□□□□ 0.24
PTP4A3-202ENST00000349124 PITPNAQ00169 270 aa16.56■□□□□ 0.24
PTP4A3-202ENST00000349124 POU4F2Q12837 409 aa16.56■□□□□ 0.24
PTP4A3-202ENST00000349124 C1orf61Q13536 156 aa16.56■□□□□ 0.24
PTP4A3-202ENST00000349124 RPL22L1Q6P5R6 122 aaKnown RBP16.56■□□□□ 0.24
PTP4A3-202ENST00000349124 ULK3Q6PHR2 472 aa16.56■□□□□ 0.24
PTP4A3-202ENST00000349124 LSMEM1Q8N8F7 131 aa16.56■□□□□ 0.24
PTP4A3-202ENST00000349124 DNAAF1Q8NEP3 725 aa16.56■□□□□ 0.24
PTP4A3-202ENST00000349124 OR2T4Q8NH00 348 aa16.56■□□□□ 0.24
PTP4A3-202ENST00000349124 OR14A16Q8NHC5 309 aa16.56■□□□□ 0.24
PTP4A3-202ENST00000349124 SMIM4Q8WVI0 70 aa16.56■□□□□ 0.24
PTP4A3-202ENST00000349124 ZNF524Q96C55 264 aa16.56■□□□□ 0.24
PTP4A3-202ENST00000349124 Q96M85 177 aa16.56■□□□□ 0.24
PTP4A3-202ENST00000349124 DDOQ99489 341 aa16.56■□□□□ 0.24
PTP4A3-202ENST00000349124 RPS6KB2Q9UBS0 482 aa16.56■□□□□ 0.24
PTP4A3-202ENST00000349124 G3V3Q6 166 aa16.55■□□□□ 0.24
PTP4A3-202ENST00000349124 SLC35E2P0CK97 266 aa16.55■□□□□ 0.24
PTP4A3-202ENST00000349124 SULT1A3P0DMM9 295 aa16.55■□□□□ 0.24
PTP4A3-202ENST00000349124 SULT1A4P0DMN0 295 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms