RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 TMIGD3P0DMS9 266 aaPredicted RBP16.41■□□□□ 0.22
APP-202ENST00000348990 GTF2F2P13984 249 aa16.41■□□□□ 0.22
APP-202ENST00000348990 ACTA2P62736 377 aa16.41■□□□□ 0.22
APP-202ENST00000348990 RPS15P62841 145 aaKnown RBP16.41■□□□□ 0.22
APP-202ENST00000348990 ACTG2P63267 376 aa16.41■□□□□ 0.22
APP-202ENST00000348990 ZNF169Q14929 603 aaPredicted RBP16.41■□□□□ 0.22
APP-202ENST00000348990 RNF44Q7L0R7 432 aa16.41■□□□□ 0.22
APP-202ENST00000348990 HIST3H2AQ7L7L0 130 aa16.41■□□□□ 0.22
APP-202ENST00000348990 OVCH1Q7RTY7 1134 aa16.41■□□□□ 0.22
APP-202ENST00000348990 DVL3Q92997 716 aaPredicted RBP16.41■□□□□ 0.22
APP-202ENST00000348990 HIST1H2ACQ93077 130 aa16.41■□□□□ 0.22
APP-202ENST00000348990 IKZF2Q9UKS7 526 aa16.41■□□□□ 0.22
APP-202ENST00000348990 IMPA2O14732 288 aa16.4■□□□□ 0.22
APP-202ENST00000348990 SPINT1O43278 529 aa16.4■□□□□ 0.22
APP-202ENST00000348990 ITGA10O75578 1167 aa16.4■□□□□ 0.22
APP-202ENST00000348990 RLN2P04090 185 aa16.4■□□□□ 0.22
APP-202ENST00000348990 ACHEP22303 614 aa16.4■□□□□ 0.22
APP-202ENST00000348990 MC2RQ01718 297 aa16.4■□□□□ 0.22
APP-202ENST00000348990 CLVS2Q5SYC1 327 aa16.4■□□□□ 0.22
APP-202ENST00000348990 RPL22L1Q6P5R6 122 aaKnown RBP16.4■□□□□ 0.22
APP-202ENST00000348990 FAM199XQ6PEV8 388 aaPredicted RBP16.4■□□□□ 0.22
APP-202ENST00000348990 OR4E2Q8NGC2 313 aa16.4■□□□□ 0.22
APP-202ENST00000348990 DUSP19Q8WTR2 217 aa16.4■□□□□ 0.22
APP-202ENST00000348990 NXPE3Q969Y0 559 aa16.4■□□□□ 0.22
APP-202ENST00000348990 NMNAT3Q96T66 252 aa16.4■□□□□ 0.22
APP-202ENST00000348990 EVA1AQ9H8M9 152 aa16.4■□□□□ 0.22
APP-202ENST00000348990 SPHK1Q9NYA1 384 aa16.4■□□□□ 0.22
APP-202ENST00000348990 TBC1D3KA0A087X1G2 549 aa16.4■□□□□ 0.22
APP-202ENST00000348990 TBC1D3BA6NDS4 549 aa16.4■□□□□ 0.22
APP-202ENST00000348990 TBC1D3FA6NER0 549 aaPredicted RBP16.4■□□□□ 0.22
APP-202ENST00000348990 AKR1C2P52895 323 aa16.4■□□□□ 0.22
APP-202ENST00000348990 AKR1C1Q04828 323 aa16.4■□□□□ 0.22
APP-202ENST00000348990 ZNF626Q68DY1 528 aa16.4■□□□□ 0.22
APP-202ENST00000348990 TBC1D3GQ6DHY5 549 aa16.4■□□□□ 0.22
APP-202ENST00000348990 SPICQ8N5J4 248 aa16.4■□□□□ 0.22
APP-202ENST00000348990 OR4K14Q8NGD5 310 aa16.4■□□□□ 0.22
APP-202ENST00000348990 SLC25A38Q96DW6 304 aa16.4■□□□□ 0.22
APP-202ENST00000348990 PLCL2Q9UPR0 1127 aa16.4■□□□□ 0.22
APP-202ENST00000348990 FAM74A7A6NL05 159 aa16.4■□□□□ 0.22
APP-202ENST00000348990 LDB3O75112 727 aa16.4■□□□□ 0.22
APP-202ENST00000348990 SC5DO75845 299 aa16.4■□□□□ 0.22
APP-202ENST00000348990 PAK4O96013 591 aaPredicted RBP16.4■□□□□ 0.22
APP-202ENST00000348990 ZNF888P0CJ79 500 aaPredicted RBP16.4■□□□□ 0.22
APP-202ENST00000348990 H2BFSP57053 126 aa16.4■□□□□ 0.22
APP-202ENST00000348990 CDK3Q00526 305 aa16.4■□□□□ 0.22
APP-202ENST00000348990 FAM74A3Q4VXF1 159 aa16.4■□□□□ 0.22
APP-202ENST00000348990 DCAF12L2Q5VW00 463 aa16.4■□□□□ 0.22
APP-202ENST00000348990 RPL13AP3Q6NVV1 102 aa16.4■□□□□ 0.22
APP-202ENST00000348990 OVCH2Q7RTZ1 564 aa16.4■□□□□ 0.22
APP-202ENST00000348990 NKX3-1Q99801 234 aaPredicted RBP16.4■□□□□ 0.22
APP-202ENST00000348990 PDCD10Q9BUL8 212 aa16.4■□□□□ 0.22
APP-202ENST00000348990 MEPEQ9NQ76 525 aaPredicted RBP16.4■□□□□ 0.22
APP-202ENST00000348990 NCDNQ9UBB6 729 aa16.4■□□□□ 0.22
APP-202ENST00000348990 ING1Q9UK53 422 aaPredicted RBP16.4■□□□□ 0.22
APP-202ENST00000348990 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.4■□□□□ 0.22
APP-202ENST00000348990 GABRA3P34903 492 aa16.39■□□□□ 0.21
APP-202ENST00000348990 EXOSC7Q15024 291 aaKnown RBP16.39■□□□□ 0.21
APP-202ENST00000348990 DHCR24Q15392 516 aa16.39■□□□□ 0.21
APP-202ENST00000348990 TFAP2EQ6VUC0 442 aa16.39■□□□□ 0.21
APP-202ENST00000348990 CRIPAKQ8N1N5 446 aa16.39■□□□□ 0.21
APP-202ENST00000348990 OPN4Q9UHM6 478 aa16.39■□□□□ 0.21
APP-202ENST00000348990 FRMPD3Q5JV73 1810 aa16.39■□□□□ 0.21
APP-202ENST00000348990 TRPM6Q9BX84 2022 aa16.39■□□□□ 0.21
APP-202ENST00000348990 A0A087WV48 116 aa16.39■□□□□ 0.21
APP-202ENST00000348990 H7C2Y5 167 aa16.39■□□□□ 0.21
APP-202ENST00000348990 NARSO43776 548 aaKnown RBP16.39■□□□□ 0.21
APP-202ENST00000348990 CSN2P05814 226 aa16.39■□□□□ 0.21
APP-202ENST00000348990 TAS2R20P59543 309 aa16.39■□□□□ 0.21
APP-202ENST00000348990 POU4F2Q12837 409 aa16.39■□□□□ 0.21
APP-202ENST00000348990 IKZF1Q13422 519 aa16.39■□□□□ 0.21
APP-202ENST00000348990 DCST2Q5T1A1 773 aa16.39■□□□□ 0.21
APP-202ENST00000348990 ARHGAP11AQ6P4F7 1023 aa16.39■□□□□ 0.21
APP-202ENST00000348990 TMEM88Q6PEY1 159 aa16.39■□□□□ 0.21
APP-202ENST00000348990 C12orf40Q86WS4 652 aa16.39■□□□□ 0.21
APP-202ENST00000348990 OR5V1Q9UGF6 321 aa16.39■□□□□ 0.21
APP-202ENST00000348990 A8MXK9 166 aa16.38■□□□□ 0.21
APP-202ENST00000348990 FAM25EA8MYX2 175 aa16.38■□□□□ 0.21
APP-202ENST00000348990 DBIP07108 87 aaKnown RBP16.38■□□□□ 0.21
APP-202ENST00000348990 OR2T7P0C7T2 308 aa16.38■□□□□ 0.21
APP-202ENST00000348990 VSIG10L2P0DP72 767 aa16.38■□□□□ 0.21
APP-202ENST00000348990 RAB3AP20336 220 aa16.38■□□□□ 0.21
APP-202ENST00000348990 DDX6P26196 483 aaKnown RBP eCLIP16.38■□□□□ 0.211e-7■■□□□ 12.3
APP-202ENST00000348990 SP3Q02447 781 aa16.38■□□□□ 0.21
APP-202ENST00000348990 ALG10BQ5I7T1 473 aa16.38■□□□□ 0.21
APP-202ENST00000348990 TSSK4Q6SA08 328 aa16.38■□□□□ 0.21
APP-202ENST00000348990 RNF113BQ8IZP6 322 aaKnown RBP16.38■□□□□ 0.21
APP-202ENST00000348990 TEX19Q8NA77 164 aa16.38■□□□□ 0.21
APP-202ENST00000348990 OR52E1Q8NGJ3 308 aa16.38■□□□□ 0.21
APP-202ENST00000348990 OR2T27Q8NH04 317 aa16.38■□□□□ 0.21
APP-202ENST00000348990 DMRTA2Q96SC8 542 aa16.38■□□□□ 0.21
APP-202ENST00000348990 PELOQ9BRX2 385 aaKnown RBP16.38■□□□□ 0.21
APP-202ENST00000348990 SLC39A1Q9NY26 324 aa16.38■□□□□ 0.21
APP-202ENST00000348990 CES1P1Q9UKY3 287 aa16.38■□□□□ 0.21
APP-202ENST00000348990 OR10H1Q9Y4A9 318 aa16.38■□□□□ 0.21
APP-202ENST00000348990 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.38■□□□□ 0.21
APP-202ENST00000348990 CTDSPLO15194 276 aa16.38■□□□□ 0.21
APP-202ENST00000348990 GALR3O60755 368 aaPredicted RBP16.38■□□□□ 0.21
APP-202ENST00000348990 OR8G3PP0DMU2 310 aa16.38■□□□□ 0.21
APP-202ENST00000348990 OR7E24Q6IFN5 339 aa16.38■□□□□ 0.21
APP-202ENST00000348990 ERN2Q76MJ5 926 aaKnown RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms