RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 OR52A5Q9H2C5 316 aa9.51□□□□□ -0.89
CHRNA1-202ENST00000348749 MED20Q9H944 212 aa9.51□□□□□ -0.89
CHRNA1-202ENST00000348749 ADGRL4Q9HBW9 690 aa9.51□□□□□ -0.89
CHRNA1-202ENST00000348749 NIT2Q9NQR4 276 aa9.51□□□□□ -0.89
CHRNA1-202ENST00000348749 WBP1LQ9NX94 342 aa9.51□□□□□ -0.89
CHRNA1-202ENST00000348749 SLC13A4Q9UKG4 626 aa9.51□□□□□ -0.89
CHRNA1-202ENST00000348749 MKL2Q9ULH7 1088 aa9.51□□□□□ -0.89
CHRNA1-202ENST00000348749 A0A0A6YYD5 115 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 OR14I1A6ND48 311 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 IFITM5A6NNB3 132 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 WRBO00258 174 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 BHLHE40O14503 412 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 FMO6PO60774 539 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 RDH16O75452 317 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 POP7O75817 140 aaKnown RBP9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 CD8AP01732 235 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 CTSLP07711 333 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 SYN1P17600 705 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 BDKRB2P30411 391 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 PYCR1P32322 319 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 TRHRP34981 398 aaPredicted RBP9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 TAS2R38P59533 333 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 STXBP1P61764 594 aaKnown RBP9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 RPS11P62280 158 aaKnown RBP eCLIP9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 SRSF4Q08170 494 aaKnown RBP9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 ILF3Q12906 894 aaKnown RBP eCLIP9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 PDZK1IP1Q13113 114 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 CDK5R1Q15078 307 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 TMEM69Q5SWH9 247 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 HES5Q5TA89 166 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 LHX8Q68G74 356 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 OLIG3Q7RTU3 272 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 KRT77Q7Z794 578 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 JAZF1Q86VZ6 243 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 NRMQ8IXM6 262 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 OR6N1Q8NGY5 312 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 PXYLP1Q8TE99 480 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 TNFAIP8L1Q8WVP5 186 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 HAVCR1Q96D42 359 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 TEAD3Q99594 435 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 ADAT1Q9BUB4 502 aaKnown RBP9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 HCAR1Q9BXC0 346 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 SEC11CQ9BY50 192 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 ALX4Q9H161 411 aaPredicted RBP9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 WDR13Q9H1Z4 485 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 OR2AG1Q9H205 316 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 GLIPR2Q9H4G4 154 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 LHX9Q9NQ69 397 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 SPHK2Q9NRA0 654 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 ZCCHC3Q9NUD5 404 aaKnown RBP9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 ANKRD10Q9NXR5 420 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 KLHL28Q9NXS3 571 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 HAO2Q9NYQ3 351 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 PCOLCE2Q9UKZ9 415 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 IRAK3Q9Y616 596 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 DNAH12Q6ZR08 3092 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 ZNF879B4DU55 563 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 MAN2B1O00754 1011 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 CDC42EP2O14613 210 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 FGF16O43320 207 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 PIP5K1CO60331 668 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 LILRB3O75022 631 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 SLC25A12O75746 678 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 AKR7A3O95154 331 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 PRNPP04156 253 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 CALCBP10092 127 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 SLC25A4P12235 298 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 PRG2P13727 222 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 PRF1P14222 555 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 ABOP16442 354 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 PRKAR1BP31321 381 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 LUMP51884 338 aaPredicted RBP9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 HCCSP53701 268 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 SNRPEP62304 92 aaKnown RBP9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 BLOC1S1P78537 153 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 HABP2Q14520 560 aaPredicted RBP9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 FAM46CQ5VWP2 391 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 OR4C11Q6IEV9 310 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 H3F3CQ6NXT2 135 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 ZNF813Q6ZN06 617 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 FCRLAQ7L513 359 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 HMGN2P46Q86SG4 172 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 SAMD14Q8IZD0 417 aaPredicted RBP9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 ZFP82Q8N141 532 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 LNX2Q8N448 690 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 OR52L1Q8NGH7 329 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 C1orf216Q8TAB5 229 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 WFIKKN2Q8TEU8 576 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 EDARADDQ8WWZ3 215 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 EDAQ92838 391 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 NUS1Q96E22 293 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 GFI1Q99684 422 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 OR52D1Q9H346 318 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 C14orf105Q9NVL8 296 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 RNF186Q9NXI6 227 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 MIOXQ9UGB7 285 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 TNFSF18Q9UNG2 199 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 ASF1AQ9Y294 204 aa9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.5□□□□□ -0.89
CHRNA1-202ENST00000348749 MYOFQ9NZM1 2061 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms