RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 FRKP42685 505 aaPredicted RBP14.13□□□□□ -0.15
LMNA-201ENST00000347559 SOX2P48431 317 aa14.13□□□□□ -0.15
LMNA-201ENST00000347559 PPP2CBP62714 309 aa14.13□□□□□ -0.15
LMNA-201ENST00000347559 POLR2LP62875 67 aaKnown RBP14.13□□□□□ -0.15
LMNA-201ENST00000347559 PPP2CAP67775 309 aa14.13□□□□□ -0.15
LMNA-201ENST00000347559 PWWP2BQ6NUJ5 590 aa14.13□□□□□ -0.15
LMNA-201ENST00000347559 GDPD4Q6W3E5 623 aa14.13□□□□□ -0.15
LMNA-201ENST00000347559 OR5AR1Q8NGP9 310 aa14.13□□□□□ -0.15
LMNA-201ENST00000347559 SP7Q8TDD2 431 aaPredicted RBP14.13□□□□□ -0.15
LMNA-201ENST00000347559 GPR174Q9BXC1 333 aa14.13□□□□□ -0.15
LMNA-201ENST00000347559 ZFP57Q9NU63 452 aa14.13□□□□□ -0.15
LMNA-201ENST00000347559 MBD2Q9UBB5 411 aa14.13□□□□□ -0.15
LMNA-201ENST00000347559 GPN3Q9UHW5 284 aaPredicted RBP14.13□□□□□ -0.15
LMNA-201ENST00000347559 ZNF705EA8MWA4 302 aaPredicted RBP14.13□□□□□ -0.15
LMNA-201ENST00000347559 F5H0A9 414 aaPredicted RBP14.13□□□□□ -0.15
LMNA-201ENST00000347559 H7C4K7 107 aa14.13□□□□□ -0.15
LMNA-201ENST00000347559 CCSO14618 274 aa14.13□□□□□ -0.15
LMNA-201ENST00000347559 EIF4E2O60573 245 aaKnown RBP14.13□□□□□ -0.15
LMNA-201ENST00000347559 GRPRP30550 384 aa14.13□□□□□ -0.15
LMNA-201ENST00000347559 MC3RP41968 323 aa14.13□□□□□ -0.15
LMNA-201ENST00000347559 PDX1P52945 283 aa14.13□□□□□ -0.15
LMNA-201ENST00000347559 ARFIP1P53367 373 aa14.13□□□□□ -0.15
LMNA-201ENST00000347559 PLA2G7Q13093 441 aa14.13□□□□□ -0.15
LMNA-201ENST00000347559 FAM129CQ86XR2 697 aa14.13□□□□□ -0.15
LMNA-201ENST00000347559 TRAM1L1Q8N609 369 aa14.13□□□□□ -0.15
LMNA-201ENST00000347559 NXPE3Q969Y0 559 aa14.13□□□□□ -0.15
LMNA-201ENST00000347559 ZNF689Q96CS4 500 aaPredicted RBP14.13□□□□□ -0.15
LMNA-201ENST00000347559 PTDSS2Q9BVG9 487 aa14.13□□□□□ -0.15
LMNA-201ENST00000347559 KRCC1Q9NPI7 259 aaPredicted RBP14.13□□□□□ -0.15
LMNA-201ENST00000347559 CMC2Q9NRP2 79 aa14.13□□□□□ -0.15
LMNA-201ENST00000347559 MIOXQ9UGB7 285 aa14.13□□□□□ -0.15
LMNA-201ENST00000347559 PPIL1Q9Y3C6 166 aa14.13□□□□□ -0.15
LMNA-201ENST00000347559 V9GY05 133 aa14.13□□□□□ -0.15
LMNA-201ENST00000347559 A0A087WV48 116 aa14.13□□□□□ -0.15
LMNA-201ENST00000347559 MAN2B1O00754 1011 aa14.13□□□□□ -0.15
LMNA-201ENST00000347559 KCNAB3O43448 404 aa14.13□□□□□ -0.15
LMNA-201ENST00000347559 FARS2O95363 451 aaKnown RBP14.13□□□□□ -0.15
LMNA-201ENST00000347559 EOMESO95936 686 aa14.13□□□□□ -0.15
LMNA-201ENST00000347559 S100A6P06703 90 aa14.13□□□□□ -0.15
LMNA-201ENST00000347559 AKR1A1P14550 325 aa14.13□□□□□ -0.15
LMNA-201ENST00000347559 MAPK3P27361 379 aaPredicted RBP14.13□□□□□ -0.15
LMNA-201ENST00000347559 SMCO1Q147U7 214 aa14.13□□□□□ -0.15
LMNA-201ENST00000347559 DEFB115Q30KQ5 88 aa14.13□□□□□ -0.15
LMNA-201ENST00000347559 KRT77Q7Z794 578 aa14.13□□□□□ -0.15
LMNA-201ENST00000347559 GLB1L2Q8IW92 636 aa14.13□□□□□ -0.15
LMNA-201ENST00000347559 AIF1LQ9BQI0 150 aa14.13□□□□□ -0.15
LMNA-201ENST00000347559 ZNF251Q9BRH9 671 aa14.13□□□□□ -0.15
LMNA-201ENST00000347559 MEX3AA1L020 520 aaKnown RBP14.12□□□□□ -0.15
LMNA-201ENST00000347559 LIPCP11150 499 aa14.12□□□□□ -0.15
LMNA-201ENST00000347559 MICBQ29980 383 aa14.12□□□□□ -0.15
LMNA-201ENST00000347559 NDUFAF7Q7L592 441 aa14.12□□□□□ -0.15
LMNA-201ENST00000347559 ZSCAN1Q8NBB4 408 aa14.12□□□□□ -0.15
LMNA-201ENST00000347559 ZNF559Q9BR84 538 aa14.12□□□□□ -0.15
LMNA-201ENST00000347559 USP36Q9P275 1121 aaKnown RBP14.12□□□□□ -0.15
LMNA-201ENST00000347559 ZNF337Q9Y3M9 751 aa14.12□□□□□ -0.15
LMNA-201ENST00000347559 A0A0D9SG52 128 aa14.12□□□□□ -0.15
LMNA-201ENST00000347559 TXNL1O43396 289 aa14.12□□□□□ -0.15
LMNA-201ENST00000347559 PRICKLE3O43900 615 aaPredicted RBP14.12□□□□□ -0.15
LMNA-201ENST00000347559 LATS1O95835 1130 aa14.12□□□□□ -0.15
LMNA-201ENST00000347559 CST9Q5W186 159 aa14.12□□□□□ -0.15
LMNA-201ENST00000347559 MRM1Q6IN84 353 aaKnown RBP14.12□□□□□ -0.15
LMNA-201ENST00000347559 JMJD6Q6NYC1 403 aaPredicted RBP14.12□□□□□ -0.15
LMNA-201ENST00000347559 WDR88Q6ZMY6 472 aa14.12□□□□□ -0.15
LMNA-201ENST00000347559 MAMSTRQ6ZN01 415 aa14.12□□□□□ -0.15
LMNA-201ENST00000347559 LNX2Q8N448 690 aa14.12□□□□□ -0.15
LMNA-201ENST00000347559 EID2Q8N6I1 236 aa14.12□□□□□ -0.15
LMNA-201ENST00000347559 PHOSPHO1Q8TCT1 267 aa14.12□□□□□ -0.15
LMNA-201ENST00000347559 SETD7Q8WTS6 366 aaKnown RBP14.12□□□□□ -0.15
LMNA-201ENST00000347559 UTP23Q9BRU9 249 aaKnown RBP14.12□□□□□ -0.15
LMNA-201ENST00000347559 LAMA3Q16787 3333 aa14.12□□□□□ -0.15
LMNA-201ENST00000347559 OR5H14A6NHG9 310 aa14.11□□□□□ -0.15
LMNA-201ENST00000347559 OR2AT4A6NND4 320 aa14.11□□□□□ -0.15
LMNA-201ENST00000347559 FAM25EA8MYX2 175 aa14.11□□□□□ -0.15
LMNA-201ENST00000347559 NEDD8-MDP1E9PL57 170 aa14.11□□□□□ -0.15
LMNA-201ENST00000347559 ZNF749O43361 778 aa14.11□□□□□ -0.15
LMNA-201ENST00000347559 HTR2AP28223 471 aa14.11□□□□□ -0.15
LMNA-201ENST00000347559 NR0B1P51843 470 aaKnown RBP14.11□□□□□ -0.15
LMNA-201ENST00000347559 RBM39Q14498 530 aaKnown RBP14.11□□□□□ -0.15
LMNA-201ENST00000347559 DHRS7BQ6IAN0 325 aaPredicted RBP14.11□□□□□ -0.15
LMNA-201ENST00000347559 C5orf46Q6UWT4 87 aa14.11□□□□□ -0.15
LMNA-201ENST00000347559 FAM122BQ7Z309 247 aa14.11□□□□□ -0.15
LMNA-201ENST00000347559 LRRTM1Q86UE6 522 aa14.11□□□□□ -0.15
LMNA-201ENST00000347559 SDR9C7Q8NEX9 313 aa14.11□□□□□ -0.15
LMNA-201ENST00000347559 NUP43Q8NFH3 380 aa14.11□□□□□ -0.15
LMNA-201ENST00000347559 STEAP2Q8NFT2 490 aa14.11□□□□□ -0.15
LMNA-201ENST00000347559 DOK4Q8TEW6 326 aa14.11□□□□□ -0.15
LMNA-201ENST00000347559 ZNF285Q96NJ3 590 aa14.11□□□□□ -0.15
LMNA-201ENST00000347559 GAL3ST1Q99999 423 aa14.11□□□□□ -0.15
LMNA-201ENST00000347559 TSPAN10Q9H1Z9 355 aaPredicted RBP14.11□□□□□ -0.15
LMNA-201ENST00000347559 DPP7Q9UHL4 492 aa14.11□□□□□ -0.15
LMNA-201ENST00000347559 SCAMP1O15126 338 aa14.11□□□□□ -0.15
LMNA-201ENST00000347559 SULT1B1O43704 296 aa14.11□□□□□ -0.15
LMNA-201ENST00000347559 OR2T1O43869 369 aa14.11□□□□□ -0.15
LMNA-201ENST00000347559 EIF1BO60739 113 aaKnown RBP14.11□□□□□ -0.15
LMNA-201ENST00000347559 ZIC2O95409 532 aaPredicted RBP14.11□□□□□ -0.15
LMNA-201ENST00000347559 ACTL6AO96019 429 aa14.11□□□□□ -0.15
LMNA-201ENST00000347559 ZNF3P17036 446 aa14.11□□□□□ -0.15
LMNA-201ENST00000347559 DLSTP36957 453 aa14.11□□□□□ -0.15
LMNA-201ENST00000347559 EIF1P41567 113 aaKnown RBP14.11□□□□□ -0.15
LMNA-201ENST00000347559 MORN1Q5T089 497 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms