RNA–Protein interactions for RNA: ENST00000345990.8

CSNK1G3-201, Transcript of casein kinase 1 gamma 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSNK1G3, Length 4,635 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3-201ENST00000345990 ZNF91Q05481 1191 aa12.54□□□□□ -0.4
CSNK1G3-201ENST00000345990 ZNF404Q494X3 552 aa12.54□□□□□ -0.4
CSNK1G3-201ENST00000345990 AAED1Q7RTV5 226 aa12.54□□□□□ -0.4
CSNK1G3-201ENST00000345990 NEK7Q8TDX7 302 aa12.54□□□□□ -0.4
CSNK1G3-201ENST00000345990 CHST11Q9NPF2 352 aa12.54□□□□□ -0.4
CSNK1G3-201ENST00000345990 LINC00854A0A1B0GVQ3 168 aa12.53□□□□□ -0.4
CSNK1G3-201ENST00000345990 IMPA2O14732 288 aa12.53□□□□□ -0.4
CSNK1G3-201ENST00000345990 MXD1Q05195 221 aa12.53□□□□□ -0.4
CSNK1G3-201ENST00000345990 SCRN3Q0VDG4 424 aa12.53□□□□□ -0.4
CSNK1G3-201ENST00000345990 ATP1A4Q13733 1029 aa12.53□□□□□ -0.4
CSNK1G3-201ENST00000345990 ALKBH2Q6NS38 261 aa12.53□□□□□ -0.4
CSNK1G3-201ENST00000345990 ARHGAP22Q7Z5H3 698 aa12.53□□□□□ -0.4
CSNK1G3-201ENST00000345990 CT55Q8WUE5 264 aa12.53□□□□□ -0.4
CSNK1G3-201ENST00000345990 VSTM2LQ96N03 204 aa12.53□□□□□ -0.4
CSNK1G3-201ENST00000345990 FBXL4Q9UKA2 621 aa12.53□□□□□ -0.4
CSNK1G3-201ENST00000345990 CAMK2AQ9UQM7 478 aa12.53□□□□□ -0.4
CSNK1G3-201ENST00000345990 SLC16A7O60669 478 aa12.53□□□□□ -0.4
CSNK1G3-201ENST00000345990 SLC19A2O60779 497 aa12.53□□□□□ -0.4
CSNK1G3-201ENST00000345990 GUSBP08236 651 aa12.53□□□□□ -0.4
CSNK1G3-201ENST00000345990 ABOP16442 354 aa12.53□□□□□ -0.4
CSNK1G3-201ENST00000345990 AQP2P41181 271 aa12.53□□□□□ -0.4
CSNK1G3-201ENST00000345990 SLC10A1Q14973 349 aa12.53□□□□□ -0.4
CSNK1G3-201ENST00000345990 BCL2L15Q5TBC7 163 aa12.53□□□□□ -0.4
CSNK1G3-201ENST00000345990 TMEM244Q5VVB8 128 aa12.53□□□□□ -0.4
CSNK1G3-201ENST00000345990 HEPHL1Q6MZM0 1159 aa12.53□□□□□ -0.4
CSNK1G3-201ENST00000345990 ZNF620Q6ZNG0 422 aa12.53□□□□□ -0.4
CSNK1G3-201ENST00000345990 PRICKLE2Q7Z3G6 844 aa12.53□□□□□ -0.4
CSNK1G3-201ENST00000345990 KLBQ86Z14 1044 aa12.53□□□□□ -0.4
CSNK1G3-201ENST00000345990 CYB561A3Q8NBI2 242 aa12.53□□□□□ -0.4
CSNK1G3-201ENST00000345990 TCEAL3Q969E4 200 aa12.53□□□□□ -0.4
CSNK1G3-201ENST00000345990 C12orf43Q96C57 262 aaKnown RBP12.53□□□□□ -0.4
CSNK1G3-201ENST00000345990 SLC6A13Q9NSD5 602 aa12.53□□□□□ -0.4
CSNK1G3-201ENST00000345990 H3BSA7 217 aa12.53□□□□□ -0.4
CSNK1G3-201ENST00000345990 HMGA2P52926 109 aa12.53□□□□□ -0.4
CSNK1G3-201ENST00000345990 TBPL2Q6SJ96 375 aa12.53□□□□□ -0.4
CSNK1G3-201ENST00000345990 POTEKPQ9BYX7 375 aa12.53□□□□□ -0.4
CSNK1G3-201ENST00000345990 EGLN3Q9H6Z9 239 aa12.53□□□□□ -0.4
CSNK1G3-201ENST00000345990 BRD7Q9NPI1 651 aa12.53□□□□□ -0.4
CSNK1G3-201ENST00000345990 TMEM74BQ9NUR3 256 aa12.53□□□□□ -0.4
CSNK1G3-201ENST00000345990 KLHL9Q9P2J3 617 aa12.53□□□□□ -0.4
CSNK1G3-201ENST00000345990 B3GALT1Q9Y5Z6 326 aa12.53□□□□□ -0.4
CSNK1G3-201ENST00000345990 CDRT1O95170 752 aa12.52□□□□□ -0.4
CSNK1G3-201ENST00000345990 MSL3P1P0C860 447 aa12.52□□□□□ -0.4
CSNK1G3-201ENST00000345990 PIPP12273 146 aaPredicted RBP12.52□□□□□ -0.4
CSNK1G3-201ENST00000345990 SLC35D2Q76EJ3 337 aa12.52□□□□□ -0.4
CSNK1G3-201ENST00000345990 NKAIN4Q8IVV8 208 aa12.52□□□□□ -0.4
CSNK1G3-201ENST00000345990 FAM26EQ8N5C1 309 aa12.52□□□□□ -0.4
CSNK1G3-201ENST00000345990 NEIL3Q8TAT5 605 aa12.52□□□□□ -0.4
CSNK1G3-201ENST00000345990 SEMA4CQ9C0C4 833 aa12.52□□□□□ -0.4
CSNK1G3-201ENST00000345990 IL20RAQ9UHF4 553 aa12.52□□□□□ -0.4
CSNK1G3-201ENST00000345990 GMEB1Q9Y692 573 aa12.52□□□□□ -0.4
CSNK1G3-201ENST00000345990 TEX13CA0A0J9YWL9 993 aa12.52□□□□□ -0.41
CSNK1G3-201ENST00000345990 IQCMA0A1B0GVH7 501 aa12.52□□□□□ -0.41
CSNK1G3-201ENST00000345990 FABP12A6NFH5 140 aa12.52□□□□□ -0.41
CSNK1G3-201ENST00000345990 BORAQ6PGQ7 559 aa12.52□□□□□ -0.41
CSNK1G3-201ENST00000345990 POC5Q8NA72 575 aa12.52□□□□□ -0.41
CSNK1G3-201ENST00000345990 TMEM203Q969S6 136 aa12.52□□□□□ -0.41
CSNK1G3-201ENST00000345990 ZMYND19Q96E35 227 aaPredicted RBP12.52□□□□□ -0.41
CSNK1G3-201ENST00000345990 LIN28AQ9H9Z2 209 aaKnown RBP12.52□□□□□ -0.41
CSNK1G3-201ENST00000345990 ABCB10Q9NRK6 738 aa12.52□□□□□ -0.41
CSNK1G3-201ENST00000345990 PLCXD1Q9NUJ7 323 aa12.52□□□□□ -0.41
CSNK1G3-201ENST00000345990 SPEF1Q9Y4P9 236 aa12.52□□□□□ -0.41
CSNK1G3-201ENST00000345990 UBE2QL1A1L167 161 aa12.52□□□□□ -0.41
CSNK1G3-201ENST00000345990 CCDC182A6NF36 153 aa12.52□□□□□ -0.41
CSNK1G3-201ENST00000345990 LRRTM2O43300 516 aa12.52□□□□□ -0.41
CSNK1G3-201ENST00000345990 IFNA6P05013 189 aa12.52□□□□□ -0.41
CSNK1G3-201ENST00000345990 CCL4P13236 92 aa12.52□□□□□ -0.41
CSNK1G3-201ENST00000345990 TPTEP56180 551 aa12.52□□□□□ -0.41
CSNK1G3-201ENST00000345990 RPL27P61353 136 aaKnown RBP12.52□□□□□ -0.41
CSNK1G3-201ENST00000345990 MLLT11Q13015 90 aaPredicted RBP12.52□□□□□ -0.41
CSNK1G3-201ENST00000345990 EIF2B1Q14232 305 aaKnown RBP12.52□□□□□ -0.41
CSNK1G3-201ENST00000345990 LIPKQ5VXJ0 399 aa12.52□□□□□ -0.41
CSNK1G3-201ENST00000345990 CWF19L1Q69YN2 538 aaKnown RBP12.52□□□□□ -0.41
CSNK1G3-201ENST00000345990 LRFN4Q6PJG9 635 aa12.52□□□□□ -0.41
CSNK1G3-201ENST00000345990 LANCL3Q6ZV70 420 aa12.52□□□□□ -0.41
CSNK1G3-201ENST00000345990 INTS12Q96CB8 462 aaKnown RBP12.52□□□□□ -0.41
CSNK1G3-201ENST00000345990 ISOC1Q96CN7 298 aa12.52□□□□□ -0.41
CSNK1G3-201ENST00000345990 MENTQ9BUN1 341 aa12.52□□□□□ -0.41
CSNK1G3-201ENST00000345990 KNTC1P50748 2209 aa12.52□□□□□ -0.41
CSNK1G3-201ENST00000345990 PLXNA4Q9HCM2 1894 aa12.52□□□□□ -0.41
CSNK1G3-201ENST00000345990 CSTBP04080 98 aaKnown RBP12.52□□□□□ -0.41
CSNK1G3-201ENST00000345990 MAP2K4P45985 399 aa12.52□□□□□ -0.41
CSNK1G3-201ENST00000345990 B3GNT8Q7Z7M8 397 aa12.52□□□□□ -0.41
CSNK1G3-201ENST00000345990 C7orf34Q96L11 122 aa12.52□□□□□ -0.41
CSNK1G3-201ENST00000345990 NIPSNAP1Q9BPW8 284 aa12.52□□□□□ -0.41
CSNK1G3-201ENST00000345990 PSORS1C1Q9UIG5 152 aa12.52□□□□□ -0.41
CSNK1G3-201ENST00000345990 NDRG4Q9ULP0 352 aaKnown RBP12.52□□□□□ -0.41
CSNK1G3-201ENST00000345990 DIMT1Q9UNQ2 313 aaKnown RBP12.52□□□□□ -0.41
CSNK1G3-201ENST00000345990 A0A1B0GW55 424 aa12.51□□□□□ -0.41
CSNK1G3-201ENST00000345990 KDM4BO94953 1096 aa12.51□□□□□ -0.41
CSNK1G3-201ENST00000345990 CRYABP02511 175 aaKnown RBP12.51□□□□□ -0.41
CSNK1G3-201ENST00000345990 DUX4L2P0CJ85 424 aa12.51□□□□□ -0.41
CSNK1G3-201ENST00000345990 DUX4L3P0CJ86 424 aa12.51□□□□□ -0.41
CSNK1G3-201ENST00000345990 DUX4L4P0CJ87 422 aa12.51□□□□□ -0.41
CSNK1G3-201ENST00000345990 DUX4L5P0CJ88 424 aa12.51□□□□□ -0.41
CSNK1G3-201ENST00000345990 DUX4L6P0CJ89 424 aa12.51□□□□□ -0.41
CSNK1G3-201ENST00000345990 DUX4L7P0CJ90 424 aa12.51□□□□□ -0.41
CSNK1G3-201ENST00000345990 EMDP50402 254 aa12.51□□□□□ -0.41
CSNK1G3-201ENST00000345990 FOXC1Q12948 553 aa12.51□□□□□ -0.41
CSNK1G3-201ENST00000345990 PRAMEF17Q5VTA0 474 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms