RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 HRH3Q9Y5N1 445 aa16.36■□□□□ 0.21
VHL-202ENST00000345392 TBC1D3EA0A087X179 549 aa16.36■□□□□ 0.21
VHL-202ENST00000345392 PTP4A3O75365 173 aa16.36■□□□□ 0.21
VHL-202ENST00000345392 OR2A4O95047 310 aa16.36■□□□□ 0.21
VHL-202ENST00000345392 P2RX1P51575 399 aa16.36■□□□□ 0.21
VHL-202ENST00000345392 HNRNPA1L2Q32P51 320 aaKnown RBP16.36■□□□□ 0.21
VHL-202ENST00000345392 AMZ1Q400G9 498 aa16.36■□□□□ 0.21
VHL-202ENST00000345392 FIGNL1Q6PIW4 674 aa16.36■□□□□ 0.21
VHL-202ENST00000345392 NRROSQ86YC3 692 aa16.36■□□□□ 0.21
VHL-202ENST00000345392 RAB42Q8N4Z0 105 aa16.36■□□□□ 0.21
VHL-202ENST00000345392 MRPL43Q8N983 215 aaKnown RBP16.36■□□□□ 0.21
VHL-202ENST00000345392 BVESQ8NE79 360 aa16.36■□□□□ 0.21
VHL-202ENST00000345392 OR2A7Q96R45 310 aa16.36■□□□□ 0.21
VHL-202ENST00000345392 DPYSL5Q9BPU6 564 aa16.36■□□□□ 0.21
VHL-202ENST00000345392 LDAHQ9H6V9 325 aa16.36■□□□□ 0.21
VHL-202ENST00000345392 MCCC2Q9HCC0 563 aa16.36■□□□□ 0.21
VHL-202ENST00000345392 SPTBN5Q9NRC6 3674 aaKnown RBP16.36■□□□□ 0.21
VHL-202ENST00000345392 TBC1D3KA0A087X1G2 549 aa16.35■□□□□ 0.21
VHL-202ENST00000345392 ANKRD20A5PA0PJZ0 165 aa16.35■□□□□ 0.21
VHL-202ENST00000345392 TBC1D3BA6NDS4 549 aa16.35■□□□□ 0.21
VHL-202ENST00000345392 TBC1D3FA6NER0 549 aaPredicted RBP16.35■□□□□ 0.21
VHL-202ENST00000345392 NAP1L6A6NFF2 107 aa16.35■□□□□ 0.21
VHL-202ENST00000345392 PYCARD-AS1I3L0S3 204 aa16.35■□□□□ 0.21
VHL-202ENST00000345392 DNAJB6O75190 326 aa16.35■□□□□ 0.21
VHL-202ENST00000345392 KDM4BO94953 1096 aa16.35■□□□□ 0.21
VHL-202ENST00000345392 APOC3P02656 99 aa16.35■□□□□ 0.21
VHL-202ENST00000345392 CDK2P24941 298 aa16.35■□□□□ 0.21
VHL-202ENST00000345392 GRPRP30550 384 aa16.35■□□□□ 0.21
VHL-202ENST00000345392 ADH7P40394 386 aa16.35■□□□□ 0.21
VHL-202ENST00000345392 CEBPEQ15744 281 aa16.35■□□□□ 0.21
VHL-202ENST00000345392 EIPR1Q53HC9 387 aa16.35■□□□□ 0.21
VHL-202ENST00000345392 TBC1D3GQ6DHY5 549 aa16.35■□□□□ 0.21
VHL-202ENST00000345392 LRRC25Q8N386 305 aaPredicted RBP16.35■□□□□ 0.21
VHL-202ENST00000345392 ZNF454Q8N9F8 522 aa16.35■□□□□ 0.21
VHL-202ENST00000345392 GPR174Q9BXC1 333 aa16.35■□□□□ 0.21
VHL-202ENST00000345392 IL21RQ9HBE5 538 aa16.35■□□□□ 0.21
VHL-202ENST00000345392 IFT46Q9NQC8 304 aa16.35■□□□□ 0.21
VHL-202ENST00000345392 MBNL1Q9NR56 388 aaKnown RBP16.35■□□□□ 0.21
VHL-202ENST00000345392 C2orf42Q9NWW7 574 aa16.35■□□□□ 0.21
VHL-202ENST00000345392 HAO2Q9NYQ3 351 aa16.35■□□□□ 0.21
VHL-202ENST00000345392 MRPS23Q9Y3D9 190 aaKnown RBP16.35■□□□□ 0.21
VHL-202ENST00000345392 PTPRSQ13332 1948 aa16.35■□□□□ 0.21
VHL-202ENST00000345392 MYO15AQ9UKN7 3530 aa16.35■□□□□ 0.21
VHL-202ENST00000345392 OR6C65A6NJZ3 312 aa16.35■□□□□ 0.21
VHL-202ENST00000345392 GNB5O14775 395 aa16.35■□□□□ 0.21
VHL-202ENST00000345392 B3GALNT1O75752 331 aa16.35■□□□□ 0.21
VHL-202ENST00000345392 PLATP00750 562 aa16.35■□□□□ 0.21
VHL-202ENST00000345392 HIST1H2ABP04908 130 aa16.35■□□□□ 0.21
VHL-202ENST00000345392 FGF2P09038 288 aa16.35■□□□□ 0.21
VHL-202ENST00000345392 TMIGD3P0DMS9 266 aaPredicted RBP16.35■□□□□ 0.21
VHL-202ENST00000345392 VSIG10L2P0DP72 767 aa16.35■□□□□ 0.21
VHL-202ENST00000345392 GABRA1P14867 456 aa16.35■□□□□ 0.21
VHL-202ENST00000345392 HIST1H1CP16403 213 aaKnown RBP16.35■□□□□ 0.21
VHL-202ENST00000345392 PPP2CBP62714 309 aa16.35■□□□□ 0.21
VHL-202ENST00000345392 PPP2CAP67775 309 aa16.35■□□□□ 0.21
VHL-202ENST00000345392 STX4Q12846 297 aa16.35■□□□□ 0.21
VHL-202ENST00000345392 HIST3H2AQ7L7L0 130 aa16.35■□□□□ 0.21
VHL-202ENST00000345392 HIST1H2ACQ93077 130 aa16.35■□□□□ 0.21
VHL-202ENST00000345392 OTUB2Q96DC9 234 aa16.35■□□□□ 0.21
VHL-202ENST00000345392 C10orf90Q96M02 699 aa16.35■□□□□ 0.21
VHL-202ENST00000345392 GPN1Q9HCN4 374 aaPredicted RBP16.35■□□□□ 0.21
VHL-202ENST00000345392 FOXJ3Q9UPW0 622 aa16.35■□□□□ 0.21
VHL-202ENST00000345392 AIPO00170 330 aa16.34■□□□□ 0.21
VHL-202ENST00000345392 ARHGDIBP52566 201 aa16.34■□□□□ 0.21
VHL-202ENST00000345392 CSRP2Q16527 193 aa16.34■□□□□ 0.21
VHL-202ENST00000345392 RPL13AP3Q6NVV1 102 aa16.34■□□□□ 0.21
VHL-202ENST00000345392 MTSS1LQ765P7 747 aa16.34■□□□□ 0.21
VHL-202ENST00000345392 OR1S1Q8NH92 325 aa16.34■□□□□ 0.21
VHL-202ENST00000345392 S100A16Q96FQ6 103 aaKnown RBP16.34■□□□□ 0.21
VHL-202ENST00000345392 PTCHD1Q96NR3 888 aa16.34■□□□□ 0.21
VHL-202ENST00000345392 MED9Q9NWA0 146 aa16.34■□□□□ 0.21
VHL-202ENST00000345392 OR5V1Q9UGF6 321 aa16.34■□□□□ 0.21
VHL-202ENST00000345392 ACSL5Q9ULC5 683 aa16.34■□□□□ 0.21
VHL-202ENST00000345392 ZNF879B4DU55 563 aa16.34■□□□□ 0.21
VHL-202ENST00000345392 SELENOFO60613 162 aa16.34■□□□□ 0.21
VHL-202ENST00000345392 RNGTTO60942 597 aaKnown RBP16.34■□□□□ 0.21
VHL-202ENST00000345392 SPDEFO95238 335 aa16.34■□□□□ 0.21
VHL-202ENST00000345392 NGFRP08138 427 aa16.34■□□□□ 0.21
VHL-202ENST00000345392 DDX6P26196 483 aaKnown RBP eCLIP16.34■□□□□ 0.211e-6■□□□□ 8.2
VHL-202ENST00000345392 CTNNB1P35222 781 aa16.34■□□□□ 0.21
VHL-202ENST00000345392 ELAVL3Q14576 367 aaKnown RBP16.34■□□□□ 0.21
VHL-202ENST00000345392 GRM7Q14831 915 aa16.34■□□□□ 0.21
VHL-202ENST00000345392 RPL22L1Q6P5R6 122 aaKnown RBP16.34■□□□□ 0.21
VHL-202ENST00000345392 SLC35F2Q8IXU6 374 aa16.34■□□□□ 0.21
VHL-202ENST00000345392 ZNF614Q8N883 585 aa16.34■□□□□ 0.21
VHL-202ENST00000345392 OR2L3Q8NG85 312 aa16.34■□□□□ 0.21
VHL-202ENST00000345392 OR52E1Q8NGJ3 308 aa16.34■□□□□ 0.21
VHL-202ENST00000345392 ZDHHC1Q8WTX9 485 aa16.34■□□□□ 0.21
VHL-202ENST00000345392 TOX2Q96NM4 488 aa16.34■□□□□ 0.21
VHL-202ENST00000345392 TMPRSS13Q9BYE2 586 aa16.34■□□□□ 0.21
VHL-202ENST00000345392 CAPN10Q9HC96 672 aa16.34■□□□□ 0.21
VHL-202ENST00000345392 OPN4Q9UHM6 478 aa16.34■□□□□ 0.21
VHL-202ENST00000345392 LTBP2Q14767 1821 aa16.34■□□□□ 0.21
VHL-202ENST00000345392 IGF2P01344 180 aa16.33■□□□□ 0.21
VHL-202ENST00000345392 ZNF35P13682 527 aa16.33■□□□□ 0.21
VHL-202ENST00000345392 NID1P14543 1247 aa16.33■□□□□ 0.21
VHL-202ENST00000345392 CBFBQ13951 182 aa16.33■□□□□ 0.21
VHL-202ENST00000345392 PWWP2BQ6NUJ5 590 aa16.33■□□□□ 0.21
VHL-202ENST00000345392 GSG1LQ6UXU4 331 aa16.33■□□□□ 0.21
VHL-202ENST00000345392 NUDT18Q6ZVK8 323 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms