RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 DNAJA1P31689 397 aaKnown RBP12.38□□□□□ -0.43
TPM4-202ENST00000344824 CEACAM8P31997 349 aaPredicted RBP12.38□□□□□ -0.43
TPM4-202ENST00000344824 SUCLG1P53597 346 aaKnown RBP12.38□□□□□ -0.43
TPM4-202ENST00000344824 RPS3AP61247 264 aaKnown RBP12.38□□□□□ -0.43
TPM4-202ENST00000344824 TFF3Q07654 80 aa12.38□□□□□ -0.43
TPM4-202ENST00000344824 ST3GAL3Q11203 375 aa12.38□□□□□ -0.43
TPM4-202ENST00000344824 TRAM2Q15035 370 aa12.38□□□□□ -0.43
TPM4-202ENST00000344824 QPRTQ15274 297 aa12.38□□□□□ -0.43
TPM4-202ENST00000344824 SGCBQ16585 318 aa12.38□□□□□ -0.43
TPM4-202ENST00000344824 PLPPR5Q32ZL2 321 aa12.38□□□□□ -0.43
TPM4-202ENST00000344824 OTUD3Q5T2D3 398 aaPredicted RBP12.38□□□□□ -0.43
TPM4-202ENST00000344824 EPHX4Q8IUS5 362 aa12.38□□□□□ -0.43
TPM4-202ENST00000344824 NKAIN4Q8IVV8 208 aa12.38□□□□□ -0.43
TPM4-202ENST00000344824 OFCC1Q8IZS5 231 aa12.38□□□□□ -0.43
TPM4-202ENST00000344824 PIK3C3Q8NEB9 887 aa12.38□□□□□ -0.43
TPM4-202ENST00000344824 OR5K1Q8NHB7 308 aa12.38□□□□□ -0.43
TPM4-202ENST00000344824 GPR119Q8TDV5 335 aa12.38□□□□□ -0.43
TPM4-202ENST00000344824 NRG4Q8WWG1 115 aa12.38□□□□□ -0.43
TPM4-202ENST00000344824 EME1Q96AY2 570 aa12.38□□□□□ -0.43
TPM4-202ENST00000344824 ZBTB8AQ96BR9 441 aa12.38□□□□□ -0.43
TPM4-202ENST00000344824 ZNF524Q96C55 264 aa12.38□□□□□ -0.43
TPM4-202ENST00000344824 EPYCQ99645 322 aa12.38□□□□□ -0.43
TPM4-202ENST00000344824 TM9SF2Q99805 663 aa12.38□□□□□ -0.43
TPM4-202ENST00000344824 ACER3Q9NUN7 267 aa12.38□□□□□ -0.43
TPM4-202ENST00000344824 CLCF1Q9UBD9 225 aa12.38□□□□□ -0.43
TPM4-202ENST00000344824 MPDZO75970 2070 aa12.38□□□□□ -0.43
TPM4-202ENST00000344824 SLC22A20A6NK97 555 aa12.37□□□□□ -0.43
TPM4-202ENST00000344824 G3V2T6 193 aa12.37□□□□□ -0.43
TPM4-202ENST00000344824 CCNA2P20248 432 aa12.37□□□□□ -0.43
TPM4-202ENST00000344824 FPR1P21462 350 aa12.37□□□□□ -0.43
TPM4-202ENST00000344824 PRKACGP22612 351 aa12.37□□□□□ -0.43
TPM4-202ENST00000344824 CTSSP25774 331 aa12.37□□□□□ -0.43
TPM4-202ENST00000344824 SFTPDP35247 375 aa12.37□□□□□ -0.43
TPM4-202ENST00000344824 EIF1AXP47813 144 aaKnown RBP12.37□□□□□ -0.43
TPM4-202ENST00000344824 PTDSS1P48651 473 aaKnown RBP12.37□□□□□ -0.43
TPM4-202ENST00000344824 ASCL1P50553 236 aa12.37□□□□□ -0.43
TPM4-202ENST00000344824 CLDN15P56746 228 aa12.37□□□□□ -0.43
TPM4-202ENST00000344824 SMIM11AP58511 58 aa12.37□□□□□ -0.43
TPM4-202ENST00000344824 SIRPAP78324 504 aa12.37□□□□□ -0.43
TPM4-202ENST00000344824 MYBPHQ13203 477 aa12.37□□□□□ -0.43
TPM4-202ENST00000344824 PON3Q15166 354 aa12.37□□□□□ -0.43
TPM4-202ENST00000344824 GLYR1Q49A26 553 aaPredicted RBP12.37□□□□□ -0.43
TPM4-202ENST00000344824 ALG10BQ5I7T1 473 aa12.37□□□□□ -0.43
TPM4-202ENST00000344824 WBP2NLQ6ICG8 309 aa12.37□□□□□ -0.43
TPM4-202ENST00000344824 ZNF613Q6PF04 617 aa12.37□□□□□ -0.43
TPM4-202ENST00000344824 STK32CQ86UX6 486 aa12.37□□□□□ -0.43
TPM4-202ENST00000344824 CNEP1R1Q8N9A8 125 aa12.37□□□□□ -0.43
TPM4-202ENST00000344824 ATP6V1C2Q8NEY4 427 aa12.37□□□□□ -0.43
TPM4-202ENST00000344824 OR4C15Q8NGM1 316 aa12.37□□□□□ -0.43
TPM4-202ENST00000344824 LRRC46Q96FV0 321 aa12.37□□□□□ -0.43
TPM4-202ENST00000344824 ZNF845Q96IR2 970 aaPredicted RBP12.37□□□□□ -0.43
TPM4-202ENST00000344824 ALPK1Q96QP1 1244 aa12.37□□□□□ -0.43
TPM4-202ENST00000344824 PRRG4Q9BZD6 226 aa12.37□□□□□ -0.43
TPM4-202ENST00000344824 MAN2C1Q9NTJ4 1040 aa12.37□□□□□ -0.43
TPM4-202ENST00000344824 PDP1Q9P0J1 537 aaPredicted RBP12.37□□□□□ -0.43
TPM4-202ENST00000344824 TMCC3Q9ULS5 477 aa12.37□□□□□ -0.43
TPM4-202ENST00000344824 APCP25054 2843 aa12.37□□□□□ -0.43
TPM4-202ENST00000344824 ANKRD17O75179 2603 aaKnown RBP12.37□□□□□ -0.43
TPM4-202ENST00000344824 LRBAP50851 2863 aa12.37□□□□□ -0.43
TPM4-202ENST00000344824 A0A0B4J2E0 115 aa12.37□□□□□ -0.43
TPM4-202ENST00000344824 A0A1B0GX12 115 aa12.37□□□□□ -0.43
TPM4-202ENST00000344824 LINC01387J3KSC0 135 aa12.37□□□□□ -0.43
TPM4-202ENST00000344824 KPNA4O00629 521 aaPredicted RBP12.37□□□□□ -0.43
TPM4-202ENST00000344824 CASQ2O14958 399 aaPredicted RBP12.37□□□□□ -0.43
TPM4-202ENST00000344824 CCNB2O95067 398 aa12.37□□□□□ -0.43
TPM4-202ENST00000344824 TGM6O95932 706 aa12.37□□□□□ -0.43
TPM4-202ENST00000344824 OPRM1P35372 400 aa12.37□□□□□ -0.43
TPM4-202ENST00000344824 ARHGDIAP52565 204 aa12.37□□□□□ -0.43
TPM4-202ENST00000344824 SUMO3P55854 103 aaPredicted RBP12.37□□□□□ -0.43
TPM4-202ENST00000344824 FOXF2Q12947 444 aa12.37□□□□□ -0.43
TPM4-202ENST00000344824 SEC23BQ15437 767 aa12.37□□□□□ -0.43
TPM4-202ENST00000344824 BCL2A1Q16548 175 aa12.37□□□□□ -0.43
TPM4-202ENST00000344824 ANKRD34AQ69YU3 496 aa12.37□□□□□ -0.43
TPM4-202ENST00000344824 PODNL1Q6PEZ8 512 aa12.37□□□□□ -0.43
TPM4-202ENST00000344824 SHQ1Q6PI26 577 aaKnown RBP12.37□□□□□ -0.43
TPM4-202ENST00000344824 TBPL2Q6SJ96 375 aa12.37□□□□□ -0.43
TPM4-202ENST00000344824 WDR88Q6ZMY6 472 aa12.37□□□□□ -0.43
TPM4-202ENST00000344824 LUZP2Q86TE4 346 aa12.37□□□□□ -0.43
TPM4-202ENST00000344824 ZDHHC13Q8IUH4 622 aa12.37□□□□□ -0.43
TPM4-202ENST00000344824 P3H2Q8IVL5 708 aa12.37□□□□□ -0.43
TPM4-202ENST00000344824 GTPBP8Q8N3Z3 284 aaPredicted RBP12.37□□□□□ -0.43
TPM4-202ENST00000344824 GALNT4Q8N4A0 578 aa12.37□□□□□ -0.43
TPM4-202ENST00000344824 CBR4Q8N4T8 237 aa12.37□□□□□ -0.43
TPM4-202ENST00000344824 LSMEM1Q8N8F7 131 aa12.37□□□□□ -0.43
TPM4-202ENST00000344824 OR9Q2Q8NGE9 314 aa12.37□□□□□ -0.43
TPM4-202ENST00000344824 GIPC3Q8TF64 312 aa12.37□□□□□ -0.43
TPM4-202ENST00000344824 TMEM255BQ8WV15 326 aa12.37□□□□□ -0.43
TPM4-202ENST00000344824 WNT2BQ93097 391 aa12.37□□□□□ -0.43
TPM4-202ENST00000344824 C3orf49Q96BT1 292 aa12.37□□□□□ -0.43
TPM4-202ENST00000344824 DHRS1Q96LJ7 313 aa12.37□□□□□ -0.43
TPM4-202ENST00000344824 TACO1Q9BSH4 297 aaKnown RBP12.37□□□□□ -0.43
TPM4-202ENST00000344824 POLR2J2Q9GZM3 115 aaKnown RBP12.37□□□□□ -0.43
TPM4-202ENST00000344824 POLR2J3Q9H1A7 115 aaKnown RBP12.37□□□□□ -0.43
TPM4-202ENST00000344824 COQ10BQ9H8M1 238 aa12.37□□□□□ -0.43
TPM4-202ENST00000344824 AP4B1Q9Y6B7 739 aa12.37□□□□□ -0.43
TPM4-202ENST00000344824 A0A1W2PRQ8 180 aa12.36□□□□□ -0.43
TPM4-202ENST00000344824 ELOA3DA6NLF2 546 aaPredicted RBP12.36□□□□□ -0.43
TPM4-202ENST00000344824 SOCS2O14508 198 aa12.36□□□□□ -0.43
TPM4-202ENST00000344824 EI24O14681 340 aa12.36□□□□□ -0.43
TPM4-202ENST00000344824 TNFSF11O14788 317 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms