RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 FAM25AB3EWG3 89 aa13.35□□□□□ -0.27
CXCL12-201ENST00000343575 FAM25CB3EWG5 89 aa13.35□□□□□ -0.27
CXCL12-201ENST00000343575 FAM25GB3EWG6 89 aa13.35□□□□□ -0.27
CXCL12-201ENST00000343575 KLF4O43474 513 aa13.35□□□□□ -0.27
CXCL12-201ENST00000343575 WBP4O75554 376 aaKnown RBP13.35□□□□□ -0.27
CXCL12-201ENST00000343575 LCKP06239 509 aa13.35□□□□□ -0.27
CXCL12-201ENST00000343575 CDK1P06493 297 aa13.35□□□□□ -0.27
CXCL12-201ENST00000343575 PRKAR1AP10644 381 aa13.35□□□□□ -0.27
CXCL12-201ENST00000343575 LIPAP38571 399 aa13.35□□□□□ -0.27
CXCL12-201ENST00000343575 P2RX1P51575 399 aa13.35□□□□□ -0.27
CXCL12-201ENST00000343575 OR2B6P58173 313 aa13.35□□□□□ -0.27
CXCL12-201ENST00000343575 RPP38P78345 283 aaKnown RBP13.35□□□□□ -0.27
CXCL12-201ENST00000343575 C17orf67Q0P5P2 114 aa13.35□□□□□ -0.27
CXCL12-201ENST00000343575 ALG10BQ5I7T1 473 aa13.35□□□□□ -0.27
CXCL12-201ENST00000343575 PRAMEF20Q5VT98 475 aa13.35□□□□□ -0.27
CXCL12-201ENST00000343575 ULK3Q6PHR2 472 aa13.35□□□□□ -0.27
CXCL12-201ENST00000343575 ZNF730Q6ZMV8 503 aa13.35□□□□□ -0.27
CXCL12-201ENST00000343575 AHSA2Q719I0 299 aa13.35□□□□□ -0.27
CXCL12-201ENST00000343575 NRMQ8IXM6 262 aa13.35□□□□□ -0.27
CXCL12-201ENST00000343575 UBQLNLQ8IYU4 475 aa13.35□□□□□ -0.27
CXCL12-201ENST00000343575 WDSUB1Q8N9V3 476 aa13.35□□□□□ -0.27
CXCL12-201ENST00000343575 TOR1AIP2Q8NFQ8 470 aa13.35□□□□□ -0.27
CXCL12-201ENST00000343575 OR6F1Q8NGZ6 308 aa13.35□□□□□ -0.27
CXCL12-201ENST00000343575 NPAS1Q99742 590 aa13.35□□□□□ -0.27
CXCL12-201ENST00000343575 ADAM19Q9H013 955 aa13.35□□□□□ -0.27
CXCL12-201ENST00000343575 SLA2Q9H6Q3 261 aa13.35□□□□□ -0.27
CXCL12-201ENST00000343575 MEPEQ9NQ76 525 aaPredicted RBP13.35□□□□□ -0.27
CXCL12-201ENST00000343575 C20orf141Q9NUB4 165 aa13.35□□□□□ -0.27
CXCL12-201ENST00000343575 STMN3Q9NZ72 180 aa13.35□□□□□ -0.27
CXCL12-201ENST00000343575 KLRF1Q9NZS2 232 aa13.35□□□□□ -0.27
CXCL12-201ENST00000343575 WIF1Q9Y5W5 379 aa13.35□□□□□ -0.27
CXCL12-201ENST00000343575 APC2O95996 2303 aa13.35□□□□□ -0.27
CXCL12-201ENST00000343575 IGLV3-32A0A0A0MS00 114 aa13.34□□□□□ -0.27
CXCL12-201ENST00000343575 ARGFXA6NJG6 315 aa13.34□□□□□ -0.27
CXCL12-201ENST00000343575 CENPXA8MT69 81 aa13.34□□□□□ -0.27
CXCL12-201ENST00000343575 ADAP00813 363 aa13.34□□□□□ -0.27
CXCL12-201ENST00000343575 DBTP11182 482 aaKnown RBP13.34□□□□□ -0.27
CXCL12-201ENST00000343575 ENDOUP21128 410 aaKnown RBP13.34□□□□□ -0.27
CXCL12-201ENST00000343575 ITGA3P26006 1051 aa13.34□□□□□ -0.27
CXCL12-201ENST00000343575 SOX8P57073 446 aa13.34□□□□□ -0.27
CXCL12-201ENST00000343575 WBP2NLQ6ICG8 309 aa13.34□□□□□ -0.27
CXCL12-201ENST00000343575 MBOAT2Q6ZWT7 520 aa13.34□□□□□ -0.27
CXCL12-201ENST00000343575 ATG4DQ86TL0 474 aaPredicted RBP13.34□□□□□ -0.27
CXCL12-201ENST00000343575 CCDC190Q86UF4 302 aa13.34□□□□□ -0.27
CXCL12-201ENST00000343575 MISPQ8IVT2 679 aa13.34□□□□□ -0.27
CXCL12-201ENST00000343575 DEPDC4Q8N2C3 294 aa13.34□□□□□ -0.27
CXCL12-201ENST00000343575 PFN4Q8NHR9 129 aa13.34□□□□□ -0.27
CXCL12-201ENST00000343575 THAP4Q8WY91 577 aa13.34□□□□□ -0.27
CXCL12-201ENST00000343575 FGF11Q92914 225 aa13.34□□□□□ -0.27
CXCL12-201ENST00000343575 SECISBP2Q96T21 854 aaKnown RBP13.34□□□□□ -0.27
CXCL12-201ENST00000343575 METTL7AQ9H8H3 244 aa13.34□□□□□ -0.27
CXCL12-201ENST00000343575 HPF1Q9NWY4 346 aa13.34□□□□□ -0.27
CXCL12-201ENST00000343575 MED11Q9P086 117 aa13.34□□□□□ -0.27
CXCL12-201ENST00000343575 IGKV1D-42A0A075B6H8 117 aa13.33□□□□□ -0.27
CXCL12-201ENST00000343575 A0A087WUJ7 227 aa13.33□□□□□ -0.27
CXCL12-201ENST00000343575 CLCA1A8K7I4 914 aa13.33□□□□□ -0.27
CXCL12-201ENST00000343575 TP53I11O14683 189 aa13.33□□□□□ -0.27
CXCL12-201ENST00000343575 IGFBP1P08833 259 aaPredicted RBP13.33□□□□□ -0.27
CXCL12-201ENST00000343575 GADD45AP24522 165 aa13.33□□□□□ -0.27
CXCL12-201ENST00000343575 IFNA8P32881 189 aa13.33□□□□□ -0.27
CXCL12-201ENST00000343575 HTR3AP46098 478 aa13.33□□□□□ -0.27
CXCL12-201ENST00000343575 RPS5P46782 204 aaKnown RBP13.33□□□□□ -0.27
CXCL12-201ENST00000343575 IL1RL1Q01638 556 aa13.33□□□□□ -0.27
CXCL12-201ENST00000343575 CDK10Q15131 360 aa13.33□□□□□ -0.27
CXCL12-201ENST00000343575 ZFP69Q49AA0 526 aa13.33□□□□□ -0.27
CXCL12-201ENST00000343575 CD300LDQ6UXZ3 194 aa13.33□□□□□ -0.27
CXCL12-201ENST00000343575 Q6ZPB1 254 aaPredicted RBP13.33□□□□□ -0.27
CXCL12-201ENST00000343575 VASH1Q7L8A9 365 aaPredicted RBP13.33□□□□□ -0.27
CXCL12-201ENST00000343575 ZNF367Q7RTV3 350 aa13.33□□□□□ -0.27
CXCL12-201ENST00000343575 DND1Q8IYX4 353 aaKnown RBP13.33□□□□□ -0.27
CXCL12-201ENST00000343575 GALNT16Q8N428 558 aa13.33□□□□□ -0.27
CXCL12-201ENST00000343575 CLEC1AQ8NC01 280 aa13.33□□□□□ -0.27
CXCL12-201ENST00000343575 TMEM239Q8WW34 195 aa13.33□□□□□ -0.27
CXCL12-201ENST00000343575 ANGPTL4Q9BY76 406 aa13.33□□□□□ -0.27
CXCL12-201ENST00000343575 MARCH7Q9H992 704 aa13.33□□□□□ -0.27
CXCL12-201ENST00000343575 MGAT4BQ9UQ53 548 aa13.33□□□□□ -0.27
CXCL12-201ENST00000343575 SSUH2Q9Y2M2 353 aa13.33□□□□□ -0.27
CXCL12-201ENST00000343575 MSRB2Q9Y3D2 182 aa13.33□□□□□ -0.27
CXCL12-201ENST00000343575 N6AMT1Q9Y5N5 214 aa13.33□□□□□ -0.27
CXCL12-201ENST00000343575 MPDZO75970 2070 aa13.33□□□□□ -0.28
CXCL12-201ENST00000343575 FRYQ5TBA9 3013 aa13.33□□□□□ -0.28
CXCL12-201ENST00000343575 M0R082 166 aa13.33□□□□□ -0.28
CXCL12-201ENST00000343575 CDC42EP2O14613 210 aa13.33□□□□□ -0.28
CXCL12-201ENST00000343575 ALX3O95076 343 aa13.33□□□□□ -0.28
CXCL12-201ENST00000343575 F10P00742 488 aa13.33□□□□□ -0.28
CXCL12-201ENST00000343575 SPNP16150 400 aa13.33□□□□□ -0.28
CXCL12-201ENST00000343575 ITPKBP27987 946 aa13.33□□□□□ -0.28
CXCL12-201ENST00000343575 GGT2P36268 569 aa13.33□□□□□ -0.28
CXCL12-201ENST00000343575 SLC1A3P43003 542 aa13.33□□□□□ -0.28
CXCL12-201ENST00000343575 SLC15A1P46059 708 aa13.33□□□□□ -0.28
CXCL12-201ENST00000343575 SLC6A8P48029 635 aa13.33□□□□□ -0.28
CXCL12-201ENST00000343575 SNTA1Q13424 505 aa13.33□□□□□ -0.28
CXCL12-201ENST00000343575 CRTC2Q53ET0 693 aaPredicted RBP13.33□□□□□ -0.28
CXCL12-201ENST00000343575 CCDC71Q8IV32 467 aaPredicted RBP13.33□□□□□ -0.28
CXCL12-201ENST00000343575 LINC00471Q8N535 108 aa13.33□□□□□ -0.28
CXCL12-201ENST00000343575 FAM83FQ8NEG4 500 aaPredicted RBP13.33□□□□□ -0.28
CXCL12-201ENST00000343575 DNAJA4Q8WW22 397 aaPredicted RBP13.33□□□□□ -0.28
CXCL12-201ENST00000343575 FAM46AQ96IP4 442 aaKnown RBP13.33□□□□□ -0.28
CXCL12-201ENST00000343575 SGCZQ96LD1 299 aa13.33□□□□□ -0.28
CXCL12-201ENST00000343575 RACGAP1Q9H0H5 632 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms