RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 TMEM201Q5SNT2 666 aa16.01■□□□□ 0.15
USF2-202ENST00000343550 GKAP1Q5VSY0 366 aaPredicted RBP16.01■□□□□ 0.15
USF2-202ENST00000343550 C6orf89Q6UWU4 347 aa16.01■□□□□ 0.15
USF2-202ENST00000343550 OR4D11Q8NGI4 311 aa16.01■□□□□ 0.15
USF2-202ENST00000343550 DNAJA4Q8WW22 397 aaPredicted RBP16.01■□□□□ 0.15
USF2-202ENST00000343550 PSD2Q9BQI7 771 aa16.01■□□□□ 0.15
USF2-202ENST00000343550 BCO1Q9HAY6 547 aa16.01■□□□□ 0.15
USF2-202ENST00000343550 C12orf10Q9HB07 376 aa16.01■□□□□ 0.15
USF2-202ENST00000343550 TMEM27Q9HBJ8 222 aa16.01■□□□□ 0.15
USF2-202ENST00000343550 ARL8BQ9NVJ2 186 aa16.01■□□□□ 0.15
USF2-202ENST00000343550 KLHL9Q9P2J3 617 aa16.01■□□□□ 0.15
USF2-202ENST00000343550 KLHL13Q9P2N7 655 aa16.01■□□□□ 0.15
USF2-202ENST00000343550 NIPBLQ6KC79 2804 aaeCLIP16.01■□□□□ 0.15
USF2-202ENST00000343550 TMEM229AB2RXF0 380 aa16■□□□□ 0.15
USF2-202ENST00000343550 M0R3H8 397 aa16■□□□□ 0.15
USF2-202ENST00000343550 PSME3P61289 254 aa16■□□□□ 0.15
USF2-202ENST00000343550 SLC35A1P78382 337 aa16■□□□□ 0.15
USF2-202ENST00000343550 EGR4Q05215 589 aa16■□□□□ 0.15
USF2-202ENST00000343550 FAM91A1Q658Y4 838 aa16■□□□□ 0.15
USF2-202ENST00000343550 ULK3Q6PHR2 472 aa16■□□□□ 0.15
USF2-202ENST00000343550 NUFIP2Q7Z417 695 aaKnown RBP16■□□□□ 0.15
USF2-202ENST00000343550 RANBP3LQ86VV4 465 aaPredicted RBP16■□□□□ 0.15
USF2-202ENST00000343550 RBM45Q8IUH3 476 aaKnown RBP16■□□□□ 0.15
USF2-202ENST00000343550 OR6T1Q8NGN1 323 aa16■□□□□ 0.15
USF2-202ENST00000343550 STK35Q8TDR2 534 aa16■□□□□ 0.15
USF2-202ENST00000343550 SLC38A4Q969I6 547 aa16■□□□□ 0.15
USF2-202ENST00000343550 ZHX1-C8orf76Q96EF9 292 aa16■□□□□ 0.15
USF2-202ENST00000343550 WFIKKN1Q96NZ8 548 aa16■□□□□ 0.15
USF2-202ENST00000343550 BEX4Q9NWD9 120 aaPredicted RBP16■□□□□ 0.15
USF2-202ENST00000343550 LIPT2A6NK58 231 aa15.99■□□□□ 0.15
USF2-202ENST00000343550 ELOA3DA6NLF2 546 aaPredicted RBP15.99■□□□□ 0.15
USF2-202ENST00000343550 ZNF814B7Z6K7 855 aa15.99■□□□□ 0.15
USF2-202ENST00000343550 EIF1BO60739 113 aaKnown RBP15.99■□□□□ 0.15
USF2-202ENST00000343550 FMO6PO60774 539 aa15.99■□□□□ 0.15
USF2-202ENST00000343550 IFNA14P01570 189 aa15.99■□□□□ 0.15
USF2-202ENST00000343550 IDUAP35475 653 aa15.99■□□□□ 0.15
USF2-202ENST00000343550 CD79BP40259 229 aa15.99■□□□□ 0.15
USF2-202ENST00000343550 NCALDP61601 193 aa15.99■□□□□ 0.15
USF2-202ENST00000343550 CEACAM7Q14002 265 aa15.99■□□□□ 0.15
USF2-202ENST00000343550 PDK3Q15120 406 aa15.99■□□□□ 0.15
USF2-202ENST00000343550 NPTX1Q15818 432 aa15.99■□□□□ 0.15
USF2-202ENST00000343550 ELOA3BQ3SY89 546 aa15.99■□□□□ 0.15
USF2-202ENST00000343550 ALG10BQ5I7T1 473 aa15.99■□□□□ 0.15
USF2-202ENST00000343550 C1orf140Q5VVS0 124 aa15.99■□□□□ 0.15
USF2-202ENST00000343550 CCDC103Q8IW40 242 aa15.99■□□□□ 0.15
USF2-202ENST00000343550 FITM2Q8N6M3 262 aa15.99■□□□□ 0.15
USF2-202ENST00000343550 ELOA3Q8NG57 546 aa15.99■□□□□ 0.15
USF2-202ENST00000343550 ZNF775Q96BV0 537 aaPredicted RBP15.99■□□□□ 0.15
USF2-202ENST00000343550 MCHR1Q99705 422 aa15.99■□□□□ 0.15
USF2-202ENST00000343550 ELOVL5Q9NYP7 299 aa15.99■□□□□ 0.15
USF2-202ENST00000343550 C6orf203Q9P0P8 240 aaPredicted RBP15.99■□□□□ 0.15
USF2-202ENST00000343550 ABCD2Q9UBJ2 740 aa15.99■□□□□ 0.15
USF2-202ENST00000343550 TAGLN3Q9UI15 199 aa15.99■□□□□ 0.15
USF2-202ENST00000343550 A0A0B4J2E0 115 aa15.99■□□□□ 0.15
USF2-202ENST00000343550 A0A1B0GX12 115 aa15.99■□□□□ 0.15
USF2-202ENST00000343550 ZNF724A8MTY0 619 aa15.99■□□□□ 0.15
USF2-202ENST00000343550 NDUFAB1O14561 156 aa15.99■□□□□ 0.15
USF2-202ENST00000343550 RAMP1O60894 148 aa15.99■□□□□ 0.15
USF2-202ENST00000343550 GPIP06744 558 aa15.99■□□□□ 0.15
USF2-202ENST00000343550 PNMTP11086 282 aa15.99■□□□□ 0.15
USF2-202ENST00000343550 ABLIM2Q6H8Q1 611 aa15.99■□□□□ 0.15
USF2-202ENST00000343550 SLC47A1Q96FL8 570 aa15.99■□□□□ 0.15
USF2-202ENST00000343550 ZNF300Q96RE9 604 aaPredicted RBP15.99■□□□□ 0.15
USF2-202ENST00000343550 TACO1Q9BSH4 297 aaKnown RBP15.99■□□□□ 0.15
USF2-202ENST00000343550 NAA11Q9BSU3 229 aaPredicted RBP15.99■□□□□ 0.15
USF2-202ENST00000343550 ALG2Q9H553 416 aa15.99■□□□□ 0.15
USF2-202ENST00000343550 C12orf49Q9H741 205 aa15.99■□□□□ 0.15
USF2-202ENST00000343550 ZNF226Q9NYT6 803 aa15.99■□□□□ 0.15
USF2-202ENST00000343550 BAG5Q9UL15 447 aa15.99■□□□□ 0.15
USF2-202ENST00000343550 SH3GLB1Q9Y371 365 aa15.99■□□□□ 0.15
USF2-202ENST00000343550 IGKV3D-15A0A087WSY6 115 aa15.98■□□□□ 0.15
USF2-202ENST00000343550 A0A087WUJ7 227 aa15.98■□□□□ 0.15
USF2-202ENST00000343550 ZNF716A6NP11 495 aa15.98■□□□□ 0.15
USF2-202ENST00000343550 UGT2B10P36537 528 aa15.98■□□□□ 0.15
USF2-202ENST00000343550 GSK3BP49841 420 aa15.98■□□□□ 0.15
USF2-202ENST00000343550 CDH12P55289 794 aa15.98■□□□□ 0.15
USF2-202ENST00000343550 SELENOWP63302 87 aa15.98■□□□□ 0.15
USF2-202ENST00000343550 NKX6-1P78426 367 aaPredicted RBP15.98■□□□□ 0.15
USF2-202ENST00000343550 OR7A5Q15622 319 aa15.98■□□□□ 0.15
USF2-202ENST00000343550 CYBRD1Q53TN4 286 aa15.98■□□□□ 0.15
USF2-202ENST00000343550 ENTPD8Q5MY95 495 aa15.98■□□□□ 0.15
USF2-202ENST00000343550 PAQR6Q6TCH4 344 aa15.98■□□□□ 0.15
USF2-202ENST00000343550 CXorf67Q86X51 503 aaPredicted RBP15.98■□□□□ 0.15
USF2-202ENST00000343550 CCDC197Q8NCU1 140 aa15.98■□□□□ 0.15
USF2-202ENST00000343550 VANGL1Q8TAA9 524 aaPredicted RBP15.98■□□□□ 0.15
USF2-202ENST00000343550 PROX1Q92786 737 aa15.98■□□□□ 0.15
USF2-202ENST00000343550 MED18Q9BUE0 208 aa15.98■□□□□ 0.15
USF2-202ENST00000343550 DEFB108AA8MXU0 73 aa15.97■□□□□ 0.15
USF2-202ENST00000343550 C16orf97H3BN30 126 aa15.97■□□□□ 0.15
USF2-202ENST00000343550 SIAH2O43255 324 aa15.97■□□□□ 0.15
USF2-202ENST00000343550 AKR7A3O95154 331 aa15.97■□□□□ 0.15
USF2-202ENST00000343550 POU2F1P14859 743 aa15.97■□□□□ 0.15
USF2-202ENST00000343550 ZNF613Q6PF04 617 aa15.97■□□□□ 0.15
USF2-202ENST00000343550 LINC00114Q6XXX2 140 aa15.97■□□□□ 0.15
USF2-202ENST00000343550 BEND4Q6ZU67 534 aa15.97■□□□□ 0.15
USF2-202ENST00000343550 BIVMQ86UB2 503 aa15.97■□□□□ 0.15
USF2-202ENST00000343550 KRTAP1-3Q8IUG1 177 aa15.97■□□□□ 0.15
USF2-202ENST00000343550 TMEM99Q8N816 258 aa15.97■□□□□ 0.15
USF2-202ENST00000343550 MFSD8Q8NHS3 518 aa15.97■□□□□ 0.15
USF2-202ENST00000343550 PIGXQ8TBF5 258 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms