RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 TEAD3Q99594 435 aa16.97■□□□□ 0.31
HOXA9-201ENST00000343483 TMED9Q9BVK6 235 aa16.97■□□□□ 0.31
HOXA9-201ENST00000343483 JAM3Q9BX67 310 aa16.97■□□□□ 0.31
HOXA9-201ENST00000343483 ABCB9Q9NP78 766 aa16.97■□□□□ 0.31
HOXA9-201ENST00000343483 ADAM18Q9Y3Q7 739 aa16.97■□□□□ 0.31
HOXA9-201ENST00000343483 IER3IP1Q9Y5U9 82 aa16.97■□□□□ 0.31
HOXA9-201ENST00000343483 SMIM30A4D0T7 59 aa16.96■□□□□ 0.31
HOXA9-201ENST00000343483 C12orf71A8MTZ7 269 aa16.96■□□□□ 0.31
HOXA9-201ENST00000343483 ALG1L2C9J202 215 aa16.96■□□□□ 0.31
HOXA9-201ENST00000343483 MRPL3P09001 348 aaKnown RBP16.96■□□□□ 0.31
HOXA9-201ENST00000343483 HIST1H1CP16403 213 aaKnown RBP16.96■□□□□ 0.31
HOXA9-201ENST00000343483 CELP19835 753 aa16.96■□□□□ 0.31
HOXA9-201ENST00000343483 TACR3P29371 465 aa16.96■□□□□ 0.31
HOXA9-201ENST00000343483 SLC6A8P48029 635 aa16.96■□□□□ 0.31
HOXA9-201ENST00000343483 DUSP3P51452 185 aaPredicted RBP16.96■□□□□ 0.31
HOXA9-201ENST00000343483 EMP2P54851 167 aa16.96■□□□□ 0.31
HOXA9-201ENST00000343483 ACSM1Q08AH1 577 aa16.96■□□□□ 0.31
HOXA9-201ENST00000343483 ZMAT1Q5H9K5 638 aa16.96■□□□□ 0.31
HOXA9-201ENST00000343483 ZNF385CQ66K41 422 aaPredicted RBP16.96■□□□□ 0.31
HOXA9-201ENST00000343483 LCN10Q6JVE6 187 aa16.96■□□□□ 0.31
HOXA9-201ENST00000343483 ZNF322Q6U7Q0 402 aaPredicted RBP16.96■□□□□ 0.31
HOXA9-201ENST00000343483 CCBE1Q6UXH8 406 aaPredicted RBP16.96■□□□□ 0.31
HOXA9-201ENST00000343483 ZBTB8BQ8NAP8 495 aaPredicted RBP16.96■□□□□ 0.31
HOXA9-201ENST00000343483 APCDD1LQ8NCL9 501 aa16.96■□□□□ 0.31
HOXA9-201ENST00000343483 SDR9C7Q8NEX9 313 aa16.96■□□□□ 0.31
HOXA9-201ENST00000343483 OR4K13Q8NH42 304 aa16.96■□□□□ 0.31
HOXA9-201ENST00000343483 CCNL2Q96S94 520 aaPredicted RBP16.96■□□□□ 0.31
HOXA9-201ENST00000343483 KATNB1Q9BVA0 655 aa16.96■□□□□ 0.31
HOXA9-201ENST00000343483 CHRNA9Q9UGM1 479 aa16.96■□□□□ 0.31
HOXA9-201ENST00000343483 CCDC182A6NF36 153 aa16.95■□□□□ 0.3
HOXA9-201ENST00000343483 J3QRE1 110 aa16.95■□□□□ 0.3
HOXA9-201ENST00000343483 EVI2BP34910 448 aa16.95■□□□□ 0.3
HOXA9-201ENST00000343483 GRK6P43250 576 aa16.95■□□□□ 0.3
HOXA9-201ENST00000343483 NRG3P56975 720 aa16.95■□□□□ 0.3
HOXA9-201ENST00000343483 PAPD4Q6PIY7 484 aaKnown RBP16.95■□□□□ 0.3
HOXA9-201ENST00000343483 POMZP3Q6PJE2 187 aa16.95■□□□□ 0.3
HOXA9-201ENST00000343483 KLBQ86Z14 1044 aa16.95■□□□□ 0.3
HOXA9-201ENST00000343483 ACBD7Q8N6N7 88 aa16.95■□□□□ 0.3
HOXA9-201ENST00000343483 TMEM99Q8N816 258 aa16.95■□□□□ 0.3
HOXA9-201ENST00000343483 OR10H4Q8NGA5 316 aa16.95■□□□□ 0.3
HOXA9-201ENST00000343483 TMEM43Q9BTV4 400 aa16.95■□□□□ 0.3
HOXA9-201ENST00000343483 SACM1LQ9NTJ5 587 aa16.95■□□□□ 0.3
HOXA9-201ENST00000343483 COL5A1P20908 1838 aaPredicted RBP16.95■□□□□ 0.3
HOXA9-201ENST00000343483 HEATR5AQ86XA9 2040 aa16.95■□□□□ 0.3
HOXA9-201ENST00000343483 A0A1W2PQD3 144 aa16.95■□□□□ 0.3
HOXA9-201ENST00000343483 A0A1W2PQL4 384 aaPredicted RBP16.95■□□□□ 0.3
HOXA9-201ENST00000343483 MEN1O00255 615 aa16.95■□□□□ 0.3
HOXA9-201ENST00000343483 SNPHO15079 494 aa16.95■□□□□ 0.3
HOXA9-201ENST00000343483 AZGP1P25311 298 aaKnown RBP16.95■□□□□ 0.3
HOXA9-201ENST00000343483 CBX3Q13185 183 aa16.95■□□□□ 0.3
HOXA9-201ENST00000343483 TOMM34Q15785 309 aaPredicted RBP16.95■□□□□ 0.3
HOXA9-201ENST00000343483 ARMC4Q5T2S8 1044 aa16.95■□□□□ 0.3
HOXA9-201ENST00000343483 GALNT6Q8NCL4 622 aa16.95■□□□□ 0.3
HOXA9-201ENST00000343483 NFAM1Q8NET5 270 aaPredicted RBP16.95■□□□□ 0.3
HOXA9-201ENST00000343483 AP3S1Q92572 193 aa16.95■□□□□ 0.3
HOXA9-201ENST00000343483 CRB3Q9BUF7 120 aa16.95■□□□□ 0.3
HOXA9-201ENST00000343483 HDHD5Q9BXW7 423 aa16.95■□□□□ 0.3
HOXA9-201ENST00000343483 SEMA4CQ9C0C4 833 aa16.95■□□□□ 0.3
HOXA9-201ENST00000343483 MIXL1Q9H2W2 232 aa16.95■□□□□ 0.3
HOXA9-201ENST00000343483 ASCC3Q8N3C0 2202 aaKnown RBP16.94■□□□□ 0.3
HOXA9-201ENST00000343483 VSTM2BA6NLU5 285 aa16.94■□□□□ 0.3
HOXA9-201ENST00000343483 BLOC1S5-TXNDC5H3BN57 136 aa16.94■□□□□ 0.3
HOXA9-201ENST00000343483 CASKO14936 926 aa16.94■□□□□ 0.3
HOXA9-201ENST00000343483 HLA-DPB1P04440 258 aa16.94■□□□□ 0.3
HOXA9-201ENST00000343483 SLC2A5P22732 501 aa16.94■□□□□ 0.3
HOXA9-201ENST00000343483 NBL1P41271 181 aa16.94■□□□□ 0.3
HOXA9-201ENST00000343483 ZNF79Q15937 498 aa16.94■□□□□ 0.3
HOXA9-201ENST00000343483 ZNF74Q16587 644 aa16.94■□□□□ 0.3
HOXA9-201ENST00000343483 DPY19L2P2Q6ZN68 376 aa16.94■□□□□ 0.3
HOXA9-201ENST00000343483 ATP6V1C2Q8NEY4 427 aa16.94■□□□□ 0.3
HOXA9-201ENST00000343483 TMCO6Q96DC7 493 aa16.94■□□□□ 0.3
HOXA9-201ENST00000343483 MOGAT1Q96PD6 335 aa16.94■□□□□ 0.3
HOXA9-201ENST00000343483 SRRQ9GZT4 340 aa16.94■□□□□ 0.3
HOXA9-201ENST00000343483 NANSQ9NR45 359 aa16.94■□□□□ 0.3
HOXA9-201ENST00000343483 KLHL1Q9NR64 748 aa16.94■□□□□ 0.3
HOXA9-201ENST00000343483 DAPL1A0PJW8 107 aa16.93■□□□□ 0.3
HOXA9-201ENST00000343483 EIF4E2O60573 245 aaKnown RBP16.93■□□□□ 0.3
HOXA9-201ENST00000343483 SERPINI2O75830 405 aa16.93■□□□□ 0.3
HOXA9-201ENST00000343483 RPS4XP62701 263 aaKnown RBP16.93■□□□□ 0.3
HOXA9-201ENST00000343483 EGR4Q05215 589 aa16.93■□□□□ 0.3
HOXA9-201ENST00000343483 DDI2Q5TDH0 399 aa16.93■□□□□ 0.3
HOXA9-201ENST00000343483 TCEAL6Q6IPX3 200 aa16.93■□□□□ 0.3
HOXA9-201ENST00000343483 FAM131AQ6UXB0 335 aa16.93■□□□□ 0.3
HOXA9-201ENST00000343483 MARCH9Q86YJ5 346 aa16.93■□□□□ 0.3
HOXA9-201ENST00000343483 GHDCQ8N2G8 530 aa16.93■□□□□ 0.3
HOXA9-201ENST00000343483 ARIH2OSQ8N7S6 290 aa16.93■□□□□ 0.3
HOXA9-201ENST00000343483 MOSPD2Q8NHP6 518 aa16.93■□□□□ 0.3
HOXA9-201ENST00000343483 TCEAL3Q969E4 200 aa16.93■□□□□ 0.3
HOXA9-201ENST00000343483 C8orf44Q96CB5 159 aa16.93■□□□□ 0.3
HOXA9-201ENST00000343483 DCLRE1CQ96SD1 692 aaKnown RBP16.93■□□□□ 0.3
HOXA9-201ENST00000343483 SPSB2Q99619 263 aa16.93■□□□□ 0.3
HOXA9-201ENST00000343483 COQ7Q99807 217 aa16.93■□□□□ 0.3
HOXA9-201ENST00000343483 ALG8Q9BVK2 526 aa16.93■□□□□ 0.3
HOXA9-201ENST00000343483 ISG20L2Q9H9L3 353 aaKnown RBP16.93■□□□□ 0.3
HOXA9-201ENST00000343483 AKIRIN1Q9H9L7 192 aaPredicted RBP16.93■□□□□ 0.3
HOXA9-201ENST00000343483 TBC1D24Q9ULP9 559 aa16.93■□□□□ 0.3
HOXA9-201ENST00000343483 NPFFR2Q9Y5X5 522 aa16.93■□□□□ 0.3
HOXA9-201ENST00000343483 OTOGLQ3ZCN5 2332 aa16.93■□□□□ 0.3
HOXA9-201ENST00000343483 TRBV11-1A0A0K0K1C0 115 aa16.93■□□□□ 0.3
HOXA9-201ENST00000343483 OR6C70A6NIJ9 312 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms