RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 LILRB3O75022 631 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 C6orf47O95873 294 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 CSF2RBP32927 897 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 GTF2BQ00403 316 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 EXOSC2Q13868 293 aaKnown RBP5.79□□□□□ -1.48
VCAN-203ENST00000343200 RCAN2Q14206 197 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 ETFDHQ16134 617 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 SPANXN4Q5MJ08 99 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 EEF1DP3Q658K8 133 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 OR52R1Q8NGF1 315 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 OR5A2Q8NGI9 324 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 OR5K2Q8NHB8 316 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 RHEBL1Q8TAI7 183 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 C7orf43Q8WVR3 580 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 ASB17Q8WXJ9 295 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 MYADMQ96S97 322 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 DDOQ99489 341 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 METTL9Q9H1A3 318 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 FGF19O95750 216 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 CT45A6P0DMU7 189 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 CT45A5P0DMU8 189 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 CT45A7P0DMV0 189 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 CT45A8P0DMV1 189 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 CT45A9P0DMV2 189 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 MSX1P28360 303 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 MDH2P40926 338 aaKnown RBP5.78□□□□□ -1.48
VCAN-203ENST00000343200 HAAOP46952 286 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 HSD17B7P56937 341 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 ACTR1AP61163 376 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 CXADRP78310 365 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 SMAD3P84022 425 aaKnown RBP5.78□□□□□ -1.48
VCAN-203ENST00000343200 CT45A2Q5DJT8 189 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 CT45A1Q5HYN5 189 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 DHRS13Q6UX07 377 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 ANKK1Q8NFD2 765 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 CT45A3Q8NHU0 189 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 GNPNAT1Q96EK6 184 aaPredicted RBP5.78□□□□□ -1.48
VCAN-203ENST00000343200 TTYH3Q9C0H2 523 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 ZNF395Q9H8N7 513 aaPredicted RBP5.78□□□□□ -1.48
VCAN-203ENST00000343200 KLHL42Q9P2K6 505 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 LRIT1Q9P2V4 623 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 NOSIPQ9Y314 301 aaKnown RBP5.78□□□□□ -1.48
VCAN-203ENST00000343200 TMEM210A6NLX4 147 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 SLITRK3O94933 977 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 OSMP13725 252 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 CCNOP22674 350 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 HMGCLP35914 325 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 GALR1P47211 349 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 ATP5IP56385 69 aaPredicted RBP5.78□□□□□ -1.48
VCAN-203ENST00000343200 UBE2G1P62253 170 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 ZP2Q05996 745 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 MPPED2Q15777 294 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 SGCBQ16585 318 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 LRIT3Q3SXY7 679 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 PRAMEF14Q5SWL7 426 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 TMEM217Q8N7C4 229 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 NETO2Q8NC67 525 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 PLA2G15Q8NCC3 412 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 ZCCHC10Q8TBK6 192 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 SLC35B4Q969S0 331 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 PSMG2Q969U7 264 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 C11orf54Q9H0W9 315 aaPredicted RBP5.78□□□□□ -1.48
VCAN-203ENST00000343200 RCE1Q9Y256 329 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 GPR52Q9Y2T5 361 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 V9GY05 133 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 NPHP4O75161 1426 aaPredicted RBP5.78□□□□□ -1.48
VCAN-203ENST00000343200 CCDC187A0A096LP49 1063 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 ZNF724A8MTY0 619 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 PDHXO00330 501 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 SYNGR4O95473 234 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 LY86O95711 162 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 GCH1P30793 250 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 SOX18P35713 384 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 SLC6A12P48065 614 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 HTRA3P83110 453 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 PLBD1Q6P4A8 553 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 MDGA2Q7Z553 956 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 HSD17B13Q7Z5P4 300 aaPredicted RBP5.78□□□□□ -1.48
VCAN-203ENST00000343200 OR5AR1Q8NGP9 310 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 TMEM239Q8WW34 195 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 PLD4Q96BZ4 506 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 PECRQ9BY49 303 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 SLC23A2Q9UGH3 650 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 NOCTQ9UK39 431 aaKnown RBP5.78□□□□□ -1.48
VCAN-203ENST00000343200 ZNF256Q9Y2P7 627 aaPredicted RBP5.78□□□□□ -1.48
VCAN-203ENST00000343200 CSAG2Q9Y5P2 127 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 MANBAO00462 879 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 TFAP2AP05549 437 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 BLKP51451 505 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 DLK1P80370 383 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 P2RY14Q15391 338 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 FBXW12Q6X9E4 464 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 MAMDC2Q7Z304 686 aaPredicted RBP5.78□□□□□ -1.48
VCAN-203ENST00000343200 MON1AQ86VX9 555 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 AKR1E2Q96JD6 320 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 CTDSP1Q9GZU7 261 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 TLE6Q9H808 572 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 MTCH1Q9NZJ7 389 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 BMPR1BO00238 502 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 GPR31O00270 319 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms