RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 CAMKMTQ7Z624 323 aa11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 TMEM185AQ8NFB2 350 aa11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 LMX1AQ8TE12 382 aa11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 KIAA1143Q96AT1 154 aaPredicted RBP11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 ABHD1Q96SE0 405 aa11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 ALG12Q9BV10 488 aa11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 IL23AQ9NPF7 189 aa11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 FBXO34Q9NWN3 711 aa11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 SYT5O00445 386 aa11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 DVL2O14641 736 aa11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 PRKAR1BP31321 381 aa11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 MESP2Q0VG99 397 aa11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 ALG11Q2TAA5 492 aa11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 TOR2AQ5JU69 321 aa11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 KIAA1211LQ6NV74 962 aa11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 KCTD20Q7Z5Y7 419 aa11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 KDM8Q8N371 416 aa11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 OR2L8Q8NGY9 312 aa11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 SFXN5Q8TD22 340 aa11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 DCLRE1CQ96SD1 692 aaKnown RBP11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 HCAR1Q9BXC0 346 aa11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 SYT4Q9H2B2 425 aa11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 EPHX3Q9H6B9 360 aa11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 B3GAT2Q9NPZ5 323 aa11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 ABRACLQ9P1F3 81 aa11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 ADAM29Q9UKF5 820 aa11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 ZNF831Q5JPB2 1677 aa11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 PRSS38A1L453 326 aa11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 NPIPA5E9PKD4 350 aa11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 TIMP1P01033 207 aa11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 HNRNPA1P09651 372 aaKnown RBP eCLIP11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 TRAPPC2P0DI81 140 aa11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 TRAPPC2BP0DI82 140 aa11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 ZNF35P13682 527 aa11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 NFYAP23511 347 aaPredicted RBP11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 HSD11B1P28845 292 aa11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 AIMP2Q13155 320 aaKnown RBP11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 PRSS53Q2L4Q9 553 aa11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 NIPAL3Q6P499 406 aa11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 ULK3Q6PHR2 472 aa11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 C17orf47Q8NEP4 570 aa11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 MED30Q96HR3 178 aa11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 G6PC3Q9BUM1 346 aa11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 CST11Q9H112 138 aa11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 ASF1BQ9NVP2 202 aa11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 NPIPA1Q9UND3 350 aa11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 TRAPPC4Q9Y296 219 aa11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 ZDBF2Q9HCK1 2354 aa11.48□□□□□ -0.57
SNRNP48-201ENST00000342415 GPR89AB7ZAQ6 455 aa11.48□□□□□ -0.57
SNRNP48-201ENST00000342415 GPR89BP0CG08 455 aa11.48□□□□□ -0.57
SNRNP48-201ENST00000342415 SRMP19623 302 aa11.48□□□□□ -0.57
SNRNP48-201ENST00000342415 ARRB1P49407 418 aaPredicted RBP11.48□□□□□ -0.57
SNRNP48-201ENST00000342415 TEKQ02763 1124 aa11.48□□□□□ -0.57
SNRNP48-201ENST00000342415 RAB11BQ15907 218 aa11.48□□□□□ -0.57
SNRNP48-201ENST00000342415 LINC01555Q8NAE3 123 aa11.48□□□□□ -0.57
SNRNP48-201ENST00000342415 GPR148Q8TDV2 347 aa11.48□□□□□ -0.57
SNRNP48-201ENST00000342415 C15orf40Q8WUR7 153 aa11.48□□□□□ -0.57
SNRNP48-201ENST00000342415 RNF170Q96K19 258 aa11.48□□□□□ -0.57
SNRNP48-201ENST00000342415 GSX2Q9BZM3 304 aa11.48□□□□□ -0.57
SNRNP48-201ENST00000342415 SLC16A7O60669 478 aa11.48□□□□□ -0.57
SNRNP48-201ENST00000342415 NTSR1P30989 418 aa11.48□□□□□ -0.57
SNRNP48-201ENST00000342415 RAD52P43351 418 aa11.48□□□□□ -0.57
SNRNP48-201ENST00000342415 CRYBA2P53672 197 aa11.48□□□□□ -0.57
SNRNP48-201ENST00000342415 DLX5P56178 289 aa11.48□□□□□ -0.57
SNRNP48-201ENST00000342415 CXADRP78310 365 aa11.48□□□□□ -0.57
SNRNP48-201ENST00000342415 TNFRSF17Q02223 184 aa11.48□□□□□ -0.57
SNRNP48-201ENST00000342415 KCTD18Q6PI47 426 aaPredicted RBP11.48□□□□□ -0.57
SNRNP48-201ENST00000342415 ZNF546Q86UE3 836 aa11.48□□□□□ -0.57
SNRNP48-201ENST00000342415 RLN3Q8WXF3 142 aa11.48□□□□□ -0.57
SNRNP48-201ENST00000342415 KCTD12Q96CX2 325 aaKnown RBP11.48□□□□□ -0.57
SNRNP48-201ENST00000342415 NRSN2Q9GZP1 204 aa11.48□□□□□ -0.57
SNRNP48-201ENST00000342415 KCNN3Q9UGI6 736 aa11.48□□□□□ -0.57
SNRNP48-201ENST00000342415 CCDC85CA6NKD9 419 aa11.48□□□□□ -0.57
SNRNP48-201ENST00000342415 AGAP14A8MT82 685 aa11.48□□□□□ -0.57
SNRNP48-201ENST00000342415 KDM4EB2RXH2 506 aaPredicted RBP11.48□□□□□ -0.57
SNRNP48-201ENST00000342415 H3BML4 177 aa11.48□□□□□ -0.57
SNRNP48-201ENST00000342415 M0QYG6 137 aa11.48□□□□□ -0.57
SNRNP48-201ENST00000342415 FGF17O60258 216 aa11.48□□□□□ -0.57
SNRNP48-201ENST00000342415 ATP1B1P05026 303 aa11.48□□□□□ -0.57
SNRNP48-201ENST00000342415 MSL3P1P0C860 447 aa11.48□□□□□ -0.57
SNRNP48-201ENST00000342415 RBM34P42696 430 aaKnown RBP11.48□□□□□ -0.57
SNRNP48-201ENST00000342415 EIF2B5Q13144 721 aaKnown RBP11.48□□□□□ -0.57
SNRNP48-201ENST00000342415 PLPP7Q8NBV4 271 aa11.48□□□□□ -0.57
SNRNP48-201ENST00000342415 OR52B4Q8NGK2 314 aa11.48□□□□□ -0.57
SNRNP48-201ENST00000342415 ZNF436Q9C0F3 470 aaPredicted RBP11.48□□□□□ -0.57
SNRNP48-201ENST00000342415 SIRT3Q9NTG7 399 aaPredicted RBP11.48□□□□□ -0.57
SNRNP48-201ENST00000342415 MED17Q9NVC6 651 aa11.48□□□□□ -0.57
SNRNP48-201ENST00000342415 ZNF281Q9Y2X9 895 aa11.48□□□□□ -0.57
SNRNP48-201ENST00000342415 SLC6A5Q9Y345 797 aa11.48□□□□□ -0.57
SNRNP48-201ENST00000342415 IDSB3KWA1 339 aa11.47□□□□□ -0.57
SNRNP48-201ENST00000342415 LANCL1O43813 399 aa11.47□□□□□ -0.57
SNRNP48-201ENST00000342415 APBB3O95704 486 aa11.47□□□□□ -0.57
SNRNP48-201ENST00000342415 CXCL3P19876 107 aa11.47□□□□□ -0.57
SNRNP48-201ENST00000342415 CD34P28906 385 aa11.47□□□□□ -0.57
SNRNP48-201ENST00000342415 DCTDP32321 178 aa11.47□□□□□ -0.57
SNRNP48-201ENST00000342415 NR0B1P51843 470 aaKnown RBP11.47□□□□□ -0.57
SNRNP48-201ENST00000342415 KCNAB1Q14722 419 aa11.47□□□□□ -0.57
SNRNP48-201ENST00000342415 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.47□□□□□ -0.57
SNRNP48-201ENST00000342415 TMEM205Q6UW68 189 aa11.47□□□□□ -0.57
SNRNP48-201ENST00000342415 ACBD4Q8NC06 268 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms